ChengsongTanPhdThesis/Chapters/Introduction.tex
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% Chapter 1
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\chapter{Introduction} % Main chapter title
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\label{Introduction} % For referencing the chapter elsewhere, use \ref{Chapter1} 
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%----------------------------------------------------------------------------------------
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% Define some commands to keep the formatting separated from the content 
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\newcommand{\keyword}[1]{\textbf{#1}}
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\newcommand{\tabhead}[1]{\textbf{#1}}
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\newcommand{\code}[1]{\texttt{#1}}
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\newcommand{\file}[1]{\texttt{\bfseries#1}}
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\newcommand{\option}[1]{\texttt{\itshape#1}}
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%boxes
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\newcommand*{\mybox}[1]{\framebox{\strut #1}}
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%\newcommand{\sflataux}[1]{\textit{sflat}\_\textit{aux} \, #1}
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\newcommand\sflat[1]{\llparenthesis #1 \rrparenthesis }
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\newcommand{\ASEQ}[3]{\textit{ASEQ}_{#1} \, #2 \, #3}
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\newcommand{\bderssimp}[2]{#1 \backslash_{bsimps} #2}
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\newcommand{\rderssimp}[2]{#1 \backslash_{rsimps} #2}
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\def\derssimp{\textit{ders}\_\textit{simp}}
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\def\rders{\textit{rders}}
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\newcommand{\bders}[2]{#1 \backslash #2}
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\newcommand{\bsimp}[1]{\textit{bsimp}(#1)}
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\def\bsimps{\textit{bsimp}}
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\newcommand{\rsimp}[1]{\textit{rsimp}\; #1}
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\newcommand{\sflataux}[1]{\llparenthesis #1 \rrparenthesis'}
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\newcommand{\dn}{\stackrel{\mbox{\scriptsize def}}{=}}%
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\newcommand{\ONE}{\mbox{\bf 1}}
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\newcommand{\AALTS}[2]{\oplus {\scriptstyle #1}\, #2}
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\newcommand{\rdistinct}[2]{\textit{rdistinct} \;\; #1 \;\; #2}
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\def\rdistincts{\textit{rdistinct}}
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\def\rDistinct{\textit{rdistinct}}
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\newcommand\hflat[1]{\llparenthesis  #1 \rrparenthesis_*}
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\newcommand\createdByStar[1]{\textit{createdByStar}(#1)}
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\def\cbn{\textit{createdByNtimes}}
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\def\hpa{\textit{highestPowerAux}}
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\def\hpower{\textit{highestPower}}
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\def\ntset{\textit{ntset}}
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\def\optermsimp{\textit{optermsimp}}
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\def\optermOsimp{\textit{optermOsimp}}
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\def\optermosimp{\textit{optermosimp}}
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\def\opterm{\textit{opterm}}
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\def\nString{\textit{nonemptyString}}
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\newcommand\myequiv{\mathrel{\stackrel{\makebox[0pt]{\mbox{\normalfont\tiny equiv}}}{=}}}
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\def\SEQ{\textit{SEQ}}
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\def\SEQs{\textit{SEQs}}
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\def\case{\textit{case}}
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\def\sequal{\stackrel{\mbox{\scriptsize rsimp}}{=}}
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\def\rsimpalts{\textit{rsimp}_{ALTS}}
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\def\good{\textit{good}}
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\def\btrue{\textit{true}}
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\def\bfalse{\textit{false}}
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\def\bnullable{\textit{bnullable}}
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\def\bnullables{\textit{bnullables}}
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\def\Some{\textit{Some}}
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\def\None{\textit{None}}
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\def\code{\textit{code}}
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\def\decode{\textit{decode}}
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\def\internalise{\textit{internalise}}
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\def\lexer{\mathit{lexer}}
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\def\mkeps{\textit{mkeps}}
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\def\rerases{\textit{rerase}}
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\def\nonnested{\textit{nonnested}}
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\def\AZERO{\textit{AZERO}}
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\def\AONE{\textit{AONE}}
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\def\ACHAR{\textit{ACHAR}}
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\def\simpsulz{\textit{simp}_{Sulz}}
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\def\scfrewrites{\stackrel{*}{\rightsquigarrow_{scf}}}
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\def\frewrites{\stackrel{*}{\rightsquigarrow_f}}
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\def\fuse{\textit{fuse}}
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\def\bder{\textit{bder}}
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\def\POSIX{\textit{POSIX}}
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\def\ALTS{\textit{ALTS}}
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\def\ASTAR{\textit{ASTAR}}
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\def\DFA{\textit{DFA}}
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\def\bmkeps{\textit{bmkeps}}
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\def\retrieve{\textit{retrieve}}
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\def\flex{\textit{flex}}
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\def\Empty{\textit{Empty}}
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\def\Left{\textit{Left}}
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\def\Right{\textit{Right}}
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\def\Stars{\textit{Stars}}
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\def\Char{\textit{Char}}
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\def\nullable{\mathit{nullable}}
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\def\rup{r^\uparrow}
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%\def\bderssimp{\mathit{bders}\_\mathit{simp}}
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\def\distinctWith{\textit{distinctWith}}
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\def\lf{\textit{lf}}
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\def\suffix{\textit{Suffix}}
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\def\nupdate{\textit{nupdate}}
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\def\size{\mathit{size}}
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\def\rexp{\mathbf{rexp}}
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\def\simp{\mathit{simp}}
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\def\simpALTs{\mathit{simp}\_\mathit{ALTs}}
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\def\map{\mathit{map}}
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\def\distinct{\mathit{distinct}}
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\def\blexersimp{\mathit{blexer}\_\mathit{simp}}
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\def\blexerStrong{\textit{blexerStrong}}
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\def\bsimpStrong{\textit{bsimpStrong}}
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\def\bdersStrongs{\textit{bdersStrong}}
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\newcommand{\bdersStrong}[2]{#1 \backslash_{bsimpStrongs} #2}
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\def\map{\textit{map}}
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\def\rrexp{\textit{rrexp}}
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\newcommand\rnullable[1]{\textit{rnullable} \; #1 }
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\newcommand\ChristianComment[1]{\textcolor{blue}{#1}\\}
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\def\rflts{\textit{rflts}}
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\def\rrewrite{\textit{rrewrite}}
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\def\bsimpalts{\textit{bsimp}_{ALTS}}
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\def\bsimpaseq{\textit{bsimp}_{ASEQ}}
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\def\rsimlalts{\textit{rsimp}_{ALTs}}
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\def\rsimpseq{\textit{rsimp}_{SEQ}}
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\def\erase{\textit{erase}}
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\def\STAR{\textit{STAR}}
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\def\zeroable{\textit{zeroable}}
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%\def\not{\textit{not}}
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\def\RZERO{\mathbf{0}_r }
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\def\RONE{\mathbf{1}_r}
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\newcommand\RCHAR[1]{\mathbf{#1}_r}
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\newcommand\RSEQ[2]{#1 \cdot #2}
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\newcommand\RALTS[1]{\sum #1}
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\newcommand\RSTAR[1]{#1^*}
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\newcommand\vsuf[2]{\textit{Suffix} \;#1\;#2}
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\lstdefinestyle{myScalastyle}{
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  frame=tb,
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  language=scala,
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  aboveskip=3mm,
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  belowskip=3mm,
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  showstringspaces=false,
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  columns=flexible,
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  basicstyle={\small\ttfamily},
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  numbers=none,
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  numberstyle=\tiny\color{gray},
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  keywordstyle=\color{blue},
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  commentstyle=\color{dkgreen},
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  stringstyle=\color{mauve},
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  frame=single,
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  breaklines=true,
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  breakatwhitespace=true,
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  tabsize=3,
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}
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%----------------------------------------------------------------------------------------
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%This part is about regular expressions, Brzozowski derivatives,
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%and a bit-coded lexing algorithm with proven correctness and time bounds.
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%TODO: look up snort rules to use here--give readers idea of what regexes look like
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Regular expressions are widely used in computer science: 
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be it in text-editors \parencite{atomEditor} with syntax highlighting and auto-completion;
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command-line tools like $\mathit{grep}$ that facilitate easy 
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text-processing \cite{grep}; network intrusion
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detection systems that inspect suspicious traffic; or compiler
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front ends.
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Given their usefulness and ubiquity, one would assume that
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modern regular expression matching implementations
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are mature and fully studied.
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Indeed, in many popular programming languages' regular expression engines, 
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one can supply a regular expression and a string, and in most cases get
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get the matching information in a very short time.
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Those engines can sometimes be blindingly fast--some 
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network intrusion detection systems
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use regular expression engines that are able to process 
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hundreds of megabytes or even gigabytes of data per second \parencite{Turo_ov__2020}.
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However, those engines can sometimes also exhibit a surprising security vulnerability
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under a certain class of inputs.
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%However, , this is not the case for $\mathbf{all}$ inputs.
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%TODO: get source for SNORT/BRO's regex matching engine/speed
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Consider for example the regular expression $(a^*)^*\,b$ and 
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strings of the form $aa..a$. These strings cannot be matched by this regular
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expression: Obviously the expected $b$ in the last
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position is missing. One would assume that modern regular expression
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matching engines can find this out very quickly. Surprisingly, if one tries
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this example in JavaScript, Python or Java 8, even with small strings, 
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say of lenght of around 30 $a$'s,
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the decision takes an absurd amount of time to finish (see graphs in figure \ref{fig:aStarStarb}).
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The algorithms clearly show exponential behaviour, and as can be seen
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is triggered by some relatively simple regular expressions.
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Java 9 and newer
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versions improve this behaviour somewhat, but are still slow compared 
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with the approach we are going to use in this thesis.
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This superlinear blowup in regular expression engines
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has caused grief in ``real life'' where it is 
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given the name ``catastrophic backtracking'' or ``evil'' regular expressions.
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For example, on 20 July 2016 one evil
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regular expression brought the webpage
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\href{http://stackexchange.com}{Stack Exchange} to its
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knees.\footnote{\url{https://stackstatus.net/post/147710624694/outage-postmortem-july-20-2016}(Last accessed in 2019)}
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In this instance, a regular expression intended to just trim white
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spaces from the beginning and the end of a line actually consumed
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massive amounts of CPU resources---causing the web servers to grind to a
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halt. In this example, the time needed to process
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the string was 
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$O(n^2)$ with respect to the string length $n$. This
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quadratic overhead was enough for the homepage of Stack Exchange to
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respond so slowly that the load balancer assumed a $\mathit{DoS}$ 
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attack and therefore stopped the servers from responding to any
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requests. This made the whole site become unavailable. 
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\begin{figure}[p]
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\begin{center}
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\begin{tabular}{@{}c@{\hspace{0mm}}c@{}}
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={JavaScript},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[red,mark=*, mark options={fill=white}] table {re-js.data};
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\end{axis}
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\end{tikzpicture}
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  &
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    %ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Python},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[blue,mark=*, mark options={fill=white}] table {re-python2.data};
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\end{axis}
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\end{tikzpicture}\\ 
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Java 8},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[cyan,mark=*, mark options={fill=white}] table {re-java.data};
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\end{axis}
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\end{tikzpicture}
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  &
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    %ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Dart},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[green,mark=*, mark options={fill=white}] table {re-dart.data};
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\end{axis}
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\end{tikzpicture}\\ 
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Swift},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[purple,mark=*, mark options={fill=white}] table {re-swift.data};
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\end{axis}
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\end{tikzpicture}
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  & 
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    %ylabel={time in secs},
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    enlargelimits=true,
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    %xtick={0,5000,...,40000},
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    %xmax=40000,
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    %ymax=35,
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    restrict x to domain*=0:40000,
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    restrict y to domain*=0:35,
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    %ytick={0,5,...,30},
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    %scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Java9+},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[orange,mark=*, mark options={fill=white}] table {re-java9.data};
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\end{axis}
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\end{tikzpicture}\\ 
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\multicolumn{2}{c}{Graphs}
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\end{tabular}    
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\end{center}
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\caption{Graphs showing runtime for matching $(a^*)^*\,b$ with strings 
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           of the form $\protect\underbrace{aa..a}_{n}$ in various existing regular expression libraries.
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   The reason for their superlinear behaviour is that they do a depth-first-search
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   using NFAs.
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   If the string does not match, the regular expression matching
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   engine starts to explore all possibilities. 
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}\label{fig:aStarStarb}
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\end{figure}\afterpage{\clearpage}
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A more recent example is a global outage of all Cloudflare servers on 2 July
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2019. A poorly written regular expression exhibited catastrophic backtracking
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and exhausted CPUs that serve HTTP traffic. Although the outage
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had several causes, at the heart was a regular expression that
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was used to monitor network
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traffic.\footnote{\url{https://blog.cloudflare.com/details-of-the-cloudflare-outage-on-july-2-2019/}(Last accessed in 2022)}
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These problems with regular expressions 
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are not isolated events that happen
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very rarely, 
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%but actually widespread.
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%They occur so often that they have a 
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but they occur actually often enough that they have a
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name: Regular-Expression-Denial-Of-Service (ReDoS)
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attacks.
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Davis et al. \cite{Davis18} detected more
612
Chengsong
parents: 609
diff changeset
   422
than 1000 evil regular expressions
635
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parents: 634
diff changeset
   423
in Node.js, Python core libraries, npm and pypi. 
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   424
They therefore concluded that evil regular expressions
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   425
are a real problem rather than just "a parlour trick".
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   426
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   427
The work in this thesis aims to address this issue
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   428
with the help of formal proofs.
612
Chengsong
parents: 609
diff changeset
   429
We describe a lexing algorithm based
635
Chengsong
parents: 634
diff changeset
   430
on Brzozowski derivatives with verified correctness 
Chengsong
parents: 634
diff changeset
   431
and a finiteness property for the size of derivatives
Chengsong
parents: 634
diff changeset
   432
(which are all done in Isabelle/HOL).
612
Chengsong
parents: 609
diff changeset
   433
Such properties %guarantee the absence of 
Chengsong
parents: 609
diff changeset
   434
are an important step in preventing
Chengsong
parents: 609
diff changeset
   435
catastrophic backtracking once and for all.
604
Chengsong
parents: 603
diff changeset
   436
We will give more details in the next sections
Chengsong
parents: 603
diff changeset
   437
on (i) why the slow cases in graph \ref{fig:aStarStarb}
612
Chengsong
parents: 609
diff changeset
   438
can occur in traditional regular expression engines
604
Chengsong
parents: 603
diff changeset
   439
and (ii) why we choose our 
612
Chengsong
parents: 609
diff changeset
   440
approach based on Brzozowski derivatives and formal proofs.
602
Chengsong
parents: 601
diff changeset
   441
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   442
612
Chengsong
parents: 609
diff changeset
   443
\section{Preliminaries}%Regex, and the Problems with Regex Matchers}
601
Chengsong
parents: 600
diff changeset
   444
Regular expressions and regular expression matchers 
635
Chengsong
parents: 634
diff changeset
   445
have clearly been studied for many, many years.
612
Chengsong
parents: 609
diff changeset
   446
Theoretical results in automata theory state 
604
Chengsong
parents: 603
diff changeset
   447
that basic regular expression matching should be linear
605
Chengsong
parents: 604
diff changeset
   448
w.r.t the input.
Chengsong
parents: 604
diff changeset
   449
This assumes that the regular expression
Chengsong
parents: 604
diff changeset
   450
$r$ was pre-processed and turned into a
635
Chengsong
parents: 634
diff changeset
   451
deterministic finite automaton (DFA) before matching \cite{Sakarovitch2009}.
604
Chengsong
parents: 603
diff changeset
   452
By basic we mean textbook definitions such as the one
612
Chengsong
parents: 609
diff changeset
   453
below, involving only regular expressions for characters, alternatives,
604
Chengsong
parents: 603
diff changeset
   454
sequences, and Kleene stars:
Chengsong
parents: 603
diff changeset
   455
\[
612
Chengsong
parents: 609
diff changeset
   456
	r ::= c | r_1 + r_2 | r_1 \cdot r_2 | r^*
604
Chengsong
parents: 603
diff changeset
   457
\]
Chengsong
parents: 603
diff changeset
   458
Modern regular expression matchers used by programmers,
Chengsong
parents: 603
diff changeset
   459
however,
635
Chengsong
parents: 634
diff changeset
   460
support much richer constructs, such as bounded repetitions,
Chengsong
parents: 634
diff changeset
   461
negations,
604
Chengsong
parents: 603
diff changeset
   462
and back-references.
612
Chengsong
parents: 609
diff changeset
   463
To differentiate, we use the word \emph{regex} to refer
605
Chengsong
parents: 604
diff changeset
   464
to those expressions with richer constructs while reserving the
Chengsong
parents: 604
diff changeset
   465
term \emph{regular expression}
Chengsong
parents: 604
diff changeset
   466
for the more traditional meaning in formal languages theory.
Chengsong
parents: 604
diff changeset
   467
We follow this convention 
Chengsong
parents: 604
diff changeset
   468
in this thesis.
Chengsong
parents: 604
diff changeset
   469
In the future, we aim to support all the popular features of regexes, 
612
Chengsong
parents: 609
diff changeset
   470
but for this work we mainly look at basic regular expressions
Chengsong
parents: 609
diff changeset
   471
and bounded repetitions.
604
Chengsong
parents: 603
diff changeset
   472
605
Chengsong
parents: 604
diff changeset
   473
Chengsong
parents: 604
diff changeset
   474
Chengsong
parents: 604
diff changeset
   475
%Most modern regex libraries
Chengsong
parents: 604
diff changeset
   476
%the so-called PCRE standard (Peral Compatible Regular Expressions)
Chengsong
parents: 604
diff changeset
   477
%has the back-references
612
Chengsong
parents: 609
diff changeset
   478
Regexes come with a number of constructs
605
Chengsong
parents: 604
diff changeset
   479
that make it more convenient for 
604
Chengsong
parents: 603
diff changeset
   480
programmers to write regular expressions.
612
Chengsong
parents: 609
diff changeset
   481
Depending on the types of constructs
605
Chengsong
parents: 604
diff changeset
   482
the task of matching and lexing with them
612
Chengsong
parents: 609
diff changeset
   483
will have different levels of complexity.
635
Chengsong
parents: 634
diff changeset
   484
Some of those constructs are syntactic sugars that are
604
Chengsong
parents: 603
diff changeset
   485
simply short hand notations
605
Chengsong
parents: 604
diff changeset
   486
that save the programmers a few keystrokes.
612
Chengsong
parents: 609
diff changeset
   487
These will not cause problems for regex libraries.
605
Chengsong
parents: 604
diff changeset
   488
For example the
612
Chengsong
parents: 609
diff changeset
   489
non-binary alternative involving three or more choices just means:
604
Chengsong
parents: 603
diff changeset
   490
\[
605
Chengsong
parents: 604
diff changeset
   491
	(a | b | c) \stackrel{means}{=} ((a + b)+ c)
604
Chengsong
parents: 603
diff changeset
   492
\]
635
Chengsong
parents: 634
diff changeset
   493
Similarly, the range operator
Chengsong
parents: 634
diff changeset
   494
%used to express the alternative
Chengsong
parents: 634
diff changeset
   495
%of all characters between its operands, 
Chengsong
parents: 634
diff changeset
   496
is just a concise way
Chengsong
parents: 634
diff changeset
   497
of expressing an alternative of consecutive characters:
604
Chengsong
parents: 603
diff changeset
   498
\[
635
Chengsong
parents: 634
diff changeset
   499
	[0~-9]\stackrel{means}{=} (0 | 1 | \ldots | 9 )  
604
Chengsong
parents: 603
diff changeset
   500
\]
612
Chengsong
parents: 609
diff changeset
   501
for an alternative. The
635
Chengsong
parents: 634
diff changeset
   502
wildcard character '$.$' is used to refer to any single character,
605
Chengsong
parents: 604
diff changeset
   503
\[
Chengsong
parents: 604
diff changeset
   504
	. \stackrel{means}{=} [0-9a-zA-Z+-()*\&\ldots]
Chengsong
parents: 604
diff changeset
   505
\]
612
Chengsong
parents: 609
diff changeset
   506
except the newline.
604
Chengsong
parents: 603
diff changeset
   507
605
Chengsong
parents: 604
diff changeset
   508
\subsection{Bounded Repetitions}
612
Chengsong
parents: 609
diff changeset
   509
More interesting are bounded repetitions, which can 
Chengsong
parents: 609
diff changeset
   510
make the regular expressions much
605
Chengsong
parents: 604
diff changeset
   511
more compact.
635
Chengsong
parents: 634
diff changeset
   512
Normally there are four kinds of bounded repetitions:
612
Chengsong
parents: 609
diff changeset
   513
$r^{\{n\}}$, $r^{\{\ldots m\}}$, $r^{\{n\ldots \}}$ and $r^{\{n\ldots m\}}$
Chengsong
parents: 609
diff changeset
   514
(where $n$ and $m$ are constant natural numbers).
Chengsong
parents: 609
diff changeset
   515
Like the star regular expressions, the set of strings or language
Chengsong
parents: 609
diff changeset
   516
a bounded regular expression can match
Chengsong
parents: 609
diff changeset
   517
is defined using the power operation on sets:
605
Chengsong
parents: 604
diff changeset
   518
\begin{center}
Chengsong
parents: 604
diff changeset
   519
	\begin{tabular}{lcl}
Chengsong
parents: 604
diff changeset
   520
		$L \; r^{\{n\}}$ & $\dn$ & $(L \; r)^n$\\
Chengsong
parents: 604
diff changeset
   521
		$L \; r^{\{\ldots m\}}$ & $\dn$ & $\bigcup_{0 \leq i \leq m}. (L \; r)^i$\\
Chengsong
parents: 604
diff changeset
   522
		$L \; r^{\{n\ldots \}}$ & $\dn$ & $\bigcup_{n \leq i}. (L \; r)^i$\\
Chengsong
parents: 604
diff changeset
   523
		$L \; r^{\{n \ldots m\}}$ & $\dn$ & $\bigcup_{n \leq i \leq m}. (L \; r)^i$
Chengsong
parents: 604
diff changeset
   524
	\end{tabular}
Chengsong
parents: 604
diff changeset
   525
\end{center}
612
Chengsong
parents: 609
diff changeset
   526
The attraction of bounded repetitions is that they can be
635
Chengsong
parents: 634
diff changeset
   527
used to avoid a size blow up: for example $r^{\{n\}}$
612
Chengsong
parents: 609
diff changeset
   528
is a shorthand for
635
Chengsong
parents: 634
diff changeset
   529
the much longer regular expression:
605
Chengsong
parents: 604
diff changeset
   530
\[
Chengsong
parents: 604
diff changeset
   531
	\underbrace{r\ldots r}_\text{n copies of r}.
Chengsong
parents: 604
diff changeset
   532
\]
Chengsong
parents: 604
diff changeset
   533
%Therefore, a naive algorithm that simply unfolds
Chengsong
parents: 604
diff changeset
   534
%them into their desugared forms
Chengsong
parents: 604
diff changeset
   535
%will suffer from at least an exponential runtime increase.
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   536
612
Chengsong
parents: 609
diff changeset
   537
Chengsong
parents: 609
diff changeset
   538
The problem with matching 
635
Chengsong
parents: 634
diff changeset
   539
such bounded repetitions
612
Chengsong
parents: 609
diff changeset
   540
is that tools based on the classic notion of
Chengsong
parents: 609
diff changeset
   541
automata need to expand $r^{\{n\}}$ into $n$ connected 
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   542
copies of the automaton for $r$. This leads to very inefficient matching
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   543
algorithms  or algorithms that consume large amounts of memory.
605
Chengsong
parents: 604
diff changeset
   544
Implementations using $\DFA$s will
635
Chengsong
parents: 634
diff changeset
   545
in such situations
605
Chengsong
parents: 604
diff changeset
   546
either become excruciatingly slow 
635
Chengsong
parents: 634
diff changeset
   547
(for example Verbatim++ \cite{Verbatimpp}) or run
Chengsong
parents: 634
diff changeset
   548
out of memory (for example $\mathit{LEX}$ and 
Chengsong
parents: 634
diff changeset
   549
$\mathit{JFLEX}$\footnote{LEX and JFLEX are lexer generators
605
Chengsong
parents: 604
diff changeset
   550
in C and JAVA that generate $\mathit{DFA}$-based
Chengsong
parents: 604
diff changeset
   551
lexers. The user provides a set of regular expressions
635
Chengsong
parents: 634
diff changeset
   552
and configurations, and then 
605
Chengsong
parents: 604
diff changeset
   553
gets an output program encoding a minimized $\mathit{DFA}$
Chengsong
parents: 604
diff changeset
   554
that can be compiled and run. 
Chengsong
parents: 604
diff changeset
   555
When given the above countdown regular expression,
635
Chengsong
parents: 634
diff changeset
   556
a small $n$ (say 20) would result in a program representing a
Chengsong
parents: 634
diff changeset
   557
DFA
612
Chengsong
parents: 609
diff changeset
   558
with millions of states.}) for large counters.
Chengsong
parents: 609
diff changeset
   559
A classic example for this phenomenon is the regular expression $(a+b)^*  a (a+b)^{n}$
605
Chengsong
parents: 604
diff changeset
   560
where the minimal DFA requires at least $2^{n+1}$ states.
Chengsong
parents: 604
diff changeset
   561
For example, when $n$ is equal to 2,
635
Chengsong
parents: 634
diff changeset
   562
the corresponding $\mathit{NFA}$ looks like:
Chengsong
parents: 634
diff changeset
   563
\vspace{6mm}
604
Chengsong
parents: 603
diff changeset
   564
\begin{center}
Chengsong
parents: 603
diff changeset
   565
\begin{tikzpicture}[shorten >=1pt,node distance=2cm,on grid,auto] 
Chengsong
parents: 603
diff changeset
   566
   \node[state,initial] (q_0)   {$q_0$}; 
Chengsong
parents: 603
diff changeset
   567
   \node[state, red] (q_1) [right=of q_0] {$q_1$}; 
Chengsong
parents: 603
diff changeset
   568
   \node[state, red] (q_2) [right=of q_1] {$q_2$}; 
Chengsong
parents: 603
diff changeset
   569
   \node[state, accepting, red](q_3) [right=of q_2] {$q_3$};
Chengsong
parents: 603
diff changeset
   570
    \path[->] 
Chengsong
parents: 603
diff changeset
   571
    (q_0) edge  node {a} (q_1)
Chengsong
parents: 603
diff changeset
   572
    	  edge [loop below] node {a,b} ()
Chengsong
parents: 603
diff changeset
   573
    (q_1) edge  node  {a,b} (q_2)
Chengsong
parents: 603
diff changeset
   574
    (q_2) edge  node  {a,b} (q_3);
Chengsong
parents: 603
diff changeset
   575
\end{tikzpicture}
Chengsong
parents: 603
diff changeset
   576
\end{center}
635
Chengsong
parents: 634
diff changeset
   577
and when turned into a DFA by the subset construction
612
Chengsong
parents: 609
diff changeset
   578
requires at least $2^3$ states.\footnote{The 
635
Chengsong
parents: 634
diff changeset
   579
red states are "countdown states" which count down 
604
Chengsong
parents: 603
diff changeset
   580
the number of characters needed in addition to the current
Chengsong
parents: 603
diff changeset
   581
string to make a successful match.
Chengsong
parents: 603
diff changeset
   582
For example, state $q_1$ indicates a match that has
Chengsong
parents: 603
diff changeset
   583
gone past the $(a|b)^*$ part of $(a|b)^*a(a|b)^{\{2\}}$,
Chengsong
parents: 603
diff changeset
   584
and just consumed the "delimiter" $a$ in the middle, and 
635
Chengsong
parents: 634
diff changeset
   585
needs to match 2 more iterations of $(a|b)$ to complete.
604
Chengsong
parents: 603
diff changeset
   586
State $q_2$ on the other hand, can be viewed as a state
Chengsong
parents: 603
diff changeset
   587
after $q_1$ has consumed 1 character, and just waits
Chengsong
parents: 603
diff changeset
   588
for 1 more character to complete.
635
Chengsong
parents: 634
diff changeset
   589
The state $q_3$ is the last (accepting) state, requiring 0 
Chengsong
parents: 634
diff changeset
   590
more characters.
604
Chengsong
parents: 603
diff changeset
   591
Depending on the suffix of the
Chengsong
parents: 603
diff changeset
   592
input string up to the current read location,
Chengsong
parents: 603
diff changeset
   593
the states $q_1$ and $q_2$, $q_3$
Chengsong
parents: 603
diff changeset
   594
may or may
635
Chengsong
parents: 634
diff changeset
   595
not be active.
604
Chengsong
parents: 603
diff changeset
   596
A $\mathit{DFA}$ for such an $\mathit{NFA}$ would
Chengsong
parents: 603
diff changeset
   597
contain at least $2^3$ non-equivalent states that cannot be merged, 
Chengsong
parents: 603
diff changeset
   598
because the subset construction during determinisation will generate
Chengsong
parents: 603
diff changeset
   599
all the elements in the power set $\mathit{Pow}\{q_1, q_2, q_3\}$.
Chengsong
parents: 603
diff changeset
   600
Generalizing this to regular expressions with larger
Chengsong
parents: 603
diff changeset
   601
bounded repetitions number, we have that
Chengsong
parents: 603
diff changeset
   602
regexes shaped like $r^*ar^{\{n\}}$ when converted to $\mathit{DFA}$s
605
Chengsong
parents: 604
diff changeset
   603
would require at least $2^{n+1}$ states, if $r$ itself contains
604
Chengsong
parents: 603
diff changeset
   604
more than 1 string.
Chengsong
parents: 603
diff changeset
   605
This is to represent all different 
635
Chengsong
parents: 634
diff changeset
   606
scenarios in which "countdown" states are active.}
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   607
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   608
635
Chengsong
parents: 634
diff changeset
   609
Bounded repetitions are important because they
Chengsong
parents: 634
diff changeset
   610
tend to occur frequently in practical use,
Chengsong
parents: 634
diff changeset
   611
for example in the regex library RegExLib, in
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   612
the rules library of Snort \cite{Snort1999}\footnote{
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   613
Snort is a network intrusion detection (NID) tool
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   614
for monitoring network traffic.
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   615
The network security community curates a list
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   616
of malicious patterns written as regexes,
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   617
which is used by Snort's detection engine
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   618
to match against network traffic for any hostile
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   619
activities such as buffer overflow attacks.}, 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   620
as well as in XML Schema definitions (XSDs).
605
Chengsong
parents: 604
diff changeset
   621
According to Bj\"{o}rklund et al \cite{xml2015},
Chengsong
parents: 604
diff changeset
   622
more than half of the 
612
Chengsong
parents: 609
diff changeset
   623
XSDs they found on the Maven.org central repository
Chengsong
parents: 609
diff changeset
   624
have bounded regular expressions in them.
Chengsong
parents: 609
diff changeset
   625
Often the counters are quite large, with the largest being
635
Chengsong
parents: 634
diff changeset
   626
close to ten million. 
Chengsong
parents: 634
diff changeset
   627
A smaller sample XSD they gave
612
Chengsong
parents: 609
diff changeset
   628
is:
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   629
\lstset{
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   630
	basicstyle=\fontsize{8.5}{9}\ttfamily,
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   631
  language=XML,
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   632
  morekeywords={encoding,
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   633
    xs:schema,xs:element,xs:complexType,xs:sequence,xs:attribute}
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   634
}
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   635
\begin{lstlisting}
612
Chengsong
parents: 609
diff changeset
   636
<sequence minOccurs="0" maxOccurs="65535">
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   637
	<element name="TimeIncr" type="mpeg7:MediaIncrDurationType"/>
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   638
 	<element name="MotionParams" type="float" minOccurs="2" maxOccurs="12"/>
612
Chengsong
parents: 609
diff changeset
   639
</sequence>
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   640
\end{lstlisting}
635
Chengsong
parents: 634
diff changeset
   641
This can be seen as the regex
605
Chengsong
parents: 604
diff changeset
   642
$(ab^{2\ldots 12})^{0 \ldots 65535}$, where $a$ and $b$ are themselves
Chengsong
parents: 604
diff changeset
   643
regular expressions 
Chengsong
parents: 604
diff changeset
   644
satisfying certain constraints (such as 
Chengsong
parents: 604
diff changeset
   645
satisfying the floating point number format).
Chengsong
parents: 604
diff changeset
   646
It is therefore quite unsatisfying that 
Chengsong
parents: 604
diff changeset
   647
some regular expressions matching libraries
Chengsong
parents: 604
diff changeset
   648
impose adhoc limits
Chengsong
parents: 604
diff changeset
   649
for bounded regular expressions:
Chengsong
parents: 604
diff changeset
   650
For example, in the regular expression matching library in the Go
Chengsong
parents: 604
diff changeset
   651
language the regular expression $a^{1001}$ is not permitted, because no counter
Chengsong
parents: 604
diff changeset
   652
can be above 1000, and in the built-in Rust regular expression library
Chengsong
parents: 604
diff changeset
   653
expressions such as $a^{\{1000\}\{100\}\{5\}}$ give an error message
606
Chengsong
parents: 605
diff changeset
   654
for being too big. 
635
Chengsong
parents: 634
diff changeset
   655
As Becchi and Crawley \cite{Becchi08}  have pointed out,
606
Chengsong
parents: 605
diff changeset
   656
the reason for these restrictions
612
Chengsong
parents: 609
diff changeset
   657
is that they simulate a non-deterministic finite
606
Chengsong
parents: 605
diff changeset
   658
automata (NFA) with a breadth-first search.
Chengsong
parents: 605
diff changeset
   659
This way the number of active states could
Chengsong
parents: 605
diff changeset
   660
be equal to the counter number.
Chengsong
parents: 605
diff changeset
   661
When the counters are large, 
Chengsong
parents: 605
diff changeset
   662
the memory requirement could become
612
Chengsong
parents: 609
diff changeset
   663
infeasible, and a regex engine
635
Chengsong
parents: 634
diff changeset
   664
like in Go will reject this pattern straight away.
606
Chengsong
parents: 605
diff changeset
   665
\begin{figure}[H]
Chengsong
parents: 605
diff changeset
   666
\begin{center}
Chengsong
parents: 605
diff changeset
   667
\begin{tikzpicture} [node distance = 2cm, on grid, auto]
Chengsong
parents: 605
diff changeset
   668
 
Chengsong
parents: 605
diff changeset
   669
    	\node (q0) [state, initial] {$0$};
Chengsong
parents: 605
diff changeset
   670
	\node (q1) [state, right = of q0] {$1$};
612
Chengsong
parents: 609
diff changeset
   671
	%\node (q2) [state, right = of q1] {$2$};
Chengsong
parents: 609
diff changeset
   672
	\node (qdots) [right = of q1] {$\ldots$};
606
Chengsong
parents: 605
diff changeset
   673
	\node (qn) [state, right = of qdots] {$n$};
Chengsong
parents: 605
diff changeset
   674
	\node (qn1) [state, right = of qn] {$n+1$};
Chengsong
parents: 605
diff changeset
   675
	\node (qn2) [state, right = of qn1] {$n+2$};
Chengsong
parents: 605
diff changeset
   676
	\node (qn3) [state, accepting, right = of qn2] {$n+3$}; 
Chengsong
parents: 605
diff changeset
   677
 
Chengsong
parents: 605
diff changeset
   678
\path [-stealth, thick]
Chengsong
parents: 605
diff changeset
   679
	(q0) edge [loop above] node {a} ()
Chengsong
parents: 605
diff changeset
   680
    (q0) edge node {a}   (q1) 
612
Chengsong
parents: 609
diff changeset
   681
    %(q1) edge node {.}   (q2)
Chengsong
parents: 609
diff changeset
   682
    (q1) edge node {.}   (qdots)
606
Chengsong
parents: 605
diff changeset
   683
    (qdots) edge node {.} (qn)
Chengsong
parents: 605
diff changeset
   684
    (qn) edge node {.} (qn1)
Chengsong
parents: 605
diff changeset
   685
    (qn1) edge node {b} (qn2)
Chengsong
parents: 605
diff changeset
   686
    (qn2) edge node {$c$} (qn3);
Chengsong
parents: 605
diff changeset
   687
\end{tikzpicture}
Chengsong
parents: 605
diff changeset
   688
%\begin{tikzpicture}[shorten >=1pt,node distance=2cm,on grid,auto] 
Chengsong
parents: 605
diff changeset
   689
%   \node[state,initial] (q_0)   {$0$}; 
Chengsong
parents: 605
diff changeset
   690
%   \node[state, ] (q_1) [right=of q_0] {$1$}; 
Chengsong
parents: 605
diff changeset
   691
%   \node[state, ] (q_2) [right=of q_1] {$2$}; 
Chengsong
parents: 605
diff changeset
   692
%   \node[state,
Chengsong
parents: 605
diff changeset
   693
%   \node[state, accepting, ](q_3) [right=of q_2] {$3$};
Chengsong
parents: 605
diff changeset
   694
%    \path[->] 
Chengsong
parents: 605
diff changeset
   695
%    (q_0) edge  node {a} (q_1)
Chengsong
parents: 605
diff changeset
   696
%    	  edge [loop below] node {a,b} ()
Chengsong
parents: 605
diff changeset
   697
%    (q_1) edge  node  {a,b} (q_2)
Chengsong
parents: 605
diff changeset
   698
%    (q_2) edge  node  {a,b} (q_3);
Chengsong
parents: 605
diff changeset
   699
%\end{tikzpicture}
Chengsong
parents: 605
diff changeset
   700
\end{center}
Chengsong
parents: 605
diff changeset
   701
\caption{The example given by Becchi and Crawley
Chengsong
parents: 605
diff changeset
   702
	that NFA simulation can consume large
Chengsong
parents: 605
diff changeset
   703
	amounts of memory: $.^*a.^{\{n\}}bc$ matching
Chengsong
parents: 605
diff changeset
   704
	strings of the form $aaa\ldots aaaabc$.
Chengsong
parents: 605
diff changeset
   705
	When traversing in a breadth-first manner,
Chengsong
parents: 605
diff changeset
   706
all states from 0 till $n+1$ will become active.}
Chengsong
parents: 605
diff changeset
   707
\end{figure}
Chengsong
parents: 605
diff changeset
   708
%Languages like $\mathit{Go}$ and $\mathit{Rust}$ use this
Chengsong
parents: 605
diff changeset
   709
%type of $\mathit{NFA}$ simulation and guarantees a linear runtime
Chengsong
parents: 605
diff changeset
   710
%in terms of input string length.
Chengsong
parents: 605
diff changeset
   711
%TODO:try out these lexers
Chengsong
parents: 605
diff changeset
   712
These problems can of course be solved in matching algorithms where 
605
Chengsong
parents: 604
diff changeset
   713
automata go beyond the classic notion and for instance include explicit
Chengsong
parents: 604
diff changeset
   714
counters \cite{Turo_ov__2020}.
612
Chengsong
parents: 609
diff changeset
   715
These solutions can be quite efficient,
606
Chengsong
parents: 605
diff changeset
   716
with the ability to process
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   717
gigabits of strings input per second
606
Chengsong
parents: 605
diff changeset
   718
even with large counters \cite{Becchi08}.
635
Chengsong
parents: 634
diff changeset
   719
These practical solutions do not come with
Chengsong
parents: 634
diff changeset
   720
formal guarantees, and as pointed out by
Chengsong
parents: 634
diff changeset
   721
Kuklewicz \cite{KuklewiczHaskell}, can be error-prone.
Chengsong
parents: 634
diff changeset
   722
%But formal reasoning about these automata especially in Isabelle 
Chengsong
parents: 634
diff changeset
   723
%can be challenging
Chengsong
parents: 634
diff changeset
   724
%and un-intuitive. 
Chengsong
parents: 634
diff changeset
   725
%Therefore, we take correctness and runtime claims made about these solutions
Chengsong
parents: 634
diff changeset
   726
%with a grain of salt.
605
Chengsong
parents: 604
diff changeset
   727
628
7af4e2420a8c ready to submit~~
Chengsong
parents: 622
diff changeset
   728
In the work reported in \cite{FoSSaCS2023} and here, 
605
Chengsong
parents: 604
diff changeset
   729
we add better support using derivatives
635
Chengsong
parents: 634
diff changeset
   730
for bounded regular expression $r^{\{n\}}$.
Chengsong
parents: 634
diff changeset
   731
Our results
605
Chengsong
parents: 604
diff changeset
   732
extend straightforwardly to
635
Chengsong
parents: 634
diff changeset
   733
repetitions with intervals such as 
605
Chengsong
parents: 604
diff changeset
   734
$r^{\{n\ldots m\}}$.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   735
The merit of Brzozowski derivatives (more on this later)
605
Chengsong
parents: 604
diff changeset
   736
on this problem is that
Chengsong
parents: 604
diff changeset
   737
it can be naturally extended to support bounded repetitions.
635
Chengsong
parents: 634
diff changeset
   738
Moreover these extensions are still made up of only small
605
Chengsong
parents: 604
diff changeset
   739
inductive datatypes and recursive functions,
633
f1edd5ee1a12 more, including link
Chengsong
parents: 631
diff changeset
   740
making it handy to deal with them in theorem provers.
605
Chengsong
parents: 604
diff changeset
   741
%The point here is that Brzozowski derivatives and the algorithms by Sulzmann and Lu can be
Chengsong
parents: 604
diff changeset
   742
%straightforwardly extended to deal with bounded regular expressions
Chengsong
parents: 604
diff changeset
   743
%and moreover the resulting code still consists of only simple
Chengsong
parents: 604
diff changeset
   744
%recursive functions and inductive datatypes.
Chengsong
parents: 604
diff changeset
   745
Finally, bounded regular expressions do not destroy our finite
Chengsong
parents: 604
diff changeset
   746
boundedness property, which we shall prove later on.
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   747
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   748
606
Chengsong
parents: 605
diff changeset
   749
Chengsong
parents: 605
diff changeset
   750
Chengsong
parents: 605
diff changeset
   751
605
Chengsong
parents: 604
diff changeset
   752
\subsection{Back-References}
606
Chengsong
parents: 605
diff changeset
   753
The other way to simulate an $\mathit{NFA}$ for matching is choosing  
Chengsong
parents: 605
diff changeset
   754
a single transition each time, keeping all the other options in 
Chengsong
parents: 605
diff changeset
   755
a queue or stack, and backtracking if that choice eventually 
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   756
fails. 
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   757
This method, often called a  "depth-first-search", 
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   758
is efficient in many cases, but could end up
606
Chengsong
parents: 605
diff changeset
   759
with exponential run time.
Chengsong
parents: 605
diff changeset
   760
The backtracking method is employed in regex libraries
Chengsong
parents: 605
diff changeset
   761
that support \emph{back-references}, for example
Chengsong
parents: 605
diff changeset
   762
in Java and Python.
605
Chengsong
parents: 604
diff changeset
   763
%\section{Back-references and The Terminology Regex}
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   764
605
Chengsong
parents: 604
diff changeset
   765
%When one constructs an $\NFA$ out of a regular expression
Chengsong
parents: 604
diff changeset
   766
%there is often very little to be done in the first phase, one simply 
Chengsong
parents: 604
diff changeset
   767
%construct the $\NFA$ states based on the structure of the input regular expression.
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   768
605
Chengsong
parents: 604
diff changeset
   769
%In the lexing phase, one can simulate the $\mathit{NFA}$ running in two ways:
Chengsong
parents: 604
diff changeset
   770
%one by keeping track of all active states after consuming 
Chengsong
parents: 604
diff changeset
   771
%a character, and update that set of states iteratively.
Chengsong
parents: 604
diff changeset
   772
%This can be viewed as a breadth-first-search of the $\mathit{NFA}$
Chengsong
parents: 604
diff changeset
   773
%for a path terminating
Chengsong
parents: 604
diff changeset
   774
%at an accepting state.
606
Chengsong
parents: 605
diff changeset
   775
Chengsong
parents: 605
diff changeset
   776
Chengsong
parents: 605
diff changeset
   777
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   778
Consider the following regular expression where the sequence
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   779
operator is omitted for brevity:
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   780
\begin{center}
606
Chengsong
parents: 605
diff changeset
   781
	$r_1r_2r_3r_4$
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   782
\end{center}
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   783
In this example,
606
Chengsong
parents: 605
diff changeset
   784
one could label sub-expressions of interest 
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   785
by parenthesizing them and giving 
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   786
them a number in the order in which their opening parentheses appear.
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   787
One possible way of parenthesizing and labelling is: 
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   788
\begin{center}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   789
	$\underset{1}{(}r_1\underset{2}{(}r_2\underset{3}{(}r_3)\underset{4}{(}r_4)))$
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   790
\end{center}
606
Chengsong
parents: 605
diff changeset
   791
The sub-expressions
Chengsong
parents: 605
diff changeset
   792
$r_1r_2r_3r_4$, $r_1r_2r_3$, $r_3$ and $r_4$ are labelled
Chengsong
parents: 605
diff changeset
   793
by 1 to 4, and can be ``referred back'' by their respective numbers. 
Chengsong
parents: 605
diff changeset
   794
%These sub-expressions are called "capturing groups".
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   795
To do so, one uses the syntax $\backslash i$ 
606
Chengsong
parents: 605
diff changeset
   796
to denote that we want the sub-string 
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   797
of the input matched by the i-th
606
Chengsong
parents: 605
diff changeset
   798
sub-expression to appear again, 
Chengsong
parents: 605
diff changeset
   799
exactly the same as it first appeared: 
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   800
\begin{center}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   801
$\ldots\underset{\text{i-th lparen}}{(}{r_i})\ldots 
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   802
\underset{s_i \text{ which just matched} \;r_i}{\backslash i} \ldots$
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   803
\end{center}
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   804
Once the sub-string $s_i$ for the sub-expression $r_i$
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   805
has been fixed, there is no variability on what the back-reference
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   806
label $\backslash i$ can be---it is tied to $s_i$.
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   807
The overall string will look like $\ldots s_i \ldots s_i \ldots $
606
Chengsong
parents: 605
diff changeset
   808
%The backslash and number $i$ are the
Chengsong
parents: 605
diff changeset
   809
%so-called "back-references".
Chengsong
parents: 605
diff changeset
   810
%Let $e$ be an expression made of regular expressions 
Chengsong
parents: 605
diff changeset
   811
%and back-references. $e$ contains the expression $e_i$
Chengsong
parents: 605
diff changeset
   812
%as its $i$-th capturing group.
Chengsong
parents: 605
diff changeset
   813
%The semantics of back-reference can be recursively
Chengsong
parents: 605
diff changeset
   814
%written as:
Chengsong
parents: 605
diff changeset
   815
%\begin{center}
Chengsong
parents: 605
diff changeset
   816
%	\begin{tabular}{c}
Chengsong
parents: 605
diff changeset
   817
%		$L ( e \cdot \backslash i) = \{s @ s_i \mid s \in L (e)\quad s_i \in L(r_i)$\\
Chengsong
parents: 605
diff changeset
   818
%		$s_i\; \text{match of ($e$, $s$)'s $i$-th capturing group string}\}$
Chengsong
parents: 605
diff changeset
   819
%	\end{tabular}
Chengsong
parents: 605
diff changeset
   820
%\end{center}
Chengsong
parents: 605
diff changeset
   821
A concrete example
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   822
for back-references is
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   823
\begin{center}
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   824
$(.^*)\backslash 1$,
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   825
\end{center}
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   826
which matches
606
Chengsong
parents: 605
diff changeset
   827
strings that can be split into two identical halves,
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   828
for example $\mathit{foofoo}$, $\mathit{ww}$ and so on.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   829
Note that this is different from 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   830
repeating the  sub-expression verbatim like
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   831
\begin{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   832
	$(.^*)(.^*)$,
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   833
\end{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   834
which does not impose any restrictions on what strings the second 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   835
sub-expression $.^*$
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   836
might match.
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   837
Another example for back-references is
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   838
\begin{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   839
$(.)(.)\backslash 2\backslash 1$
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   840
\end{center}
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   841
which matches four-character palindromes
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   842
like $abba$, $x??x$ and so on.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   843
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   844
Back-references are a regex construct 
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   845
that programmers find quite useful.
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   846
According to Becchi and Crawley \cite{Becchi08},
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   847
6\% of Snort rules (up until 2008) use them.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   848
The most common use of back-references
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   849
is to express well-formed html files,
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   850
where back-references are convenient for matching
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   851
opening and closing tags like 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   852
\begin{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   853
	$\langle html \rangle \ldots \langle / html \rangle$
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   854
\end{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   855
A regex describing such a format
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   856
is
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   857
\begin{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   858
	$\langle (.^+) \rangle \ldots \langle / \backslash 1 \rangle$
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   859
\end{center}
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   860
Despite being useful, the expressive power of regexes 
633
f1edd5ee1a12 more, including link
Chengsong
parents: 631
diff changeset
   861
go beyond regular languages 
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   862
once back-references are included.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   863
In fact, they allow the regex construct to express 
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   864
languages that cannot be contained in context-free
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   865
languages either.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   866
For example, the back-reference $(a^*)b\backslash1 b \backslash 1$
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   867
expresses the language $\{a^n b a^n b a^n\mid n \in \mathbb{N}\}$,
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   868
which cannot be expressed by 
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   869
context-free grammars \cite{campeanu2003formal}.
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   870
Such a language is contained in the context-sensitive hierarchy
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   871
of formal languages. 
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   872
Also solving the matching problem involving back-references
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   873
is known to be NP-complete \parencite{alfred2014algorithms}.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   874
Regex libraries supporting back-references such as 
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   875
PCRE \cite{pcre} therefore have to
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   876
revert to a depth-first search algorithm including backtracking.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   877
What is unexpected is that even in the cases 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   878
not involving back-references, there is still
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   879
a (non-negligible) chance they might backtrack super-linearly,
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   880
as shown in the graphs in figure \ref{fig:aStarStarb}.
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   881
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   882
Summing up, we can categorise existing 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   883
practical regex libraries into two kinds:
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   884
(i) The ones  with  linear
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   885
time guarantees like Go and Rust. The downside with them is that
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   886
they impose restrictions
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   887
on the regular expressions (not allowing back-references, 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   888
bounded repetitions cannot exceed an ad hoc limit etc.).
633
f1edd5ee1a12 more, including link
Chengsong
parents: 631
diff changeset
   889
And (ii) those 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   890
that allow large bounded regular expressions and back-references
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   891
at the expense of using backtracking algorithms.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   892
They can potentially ``grind to a halt''
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   893
on some very simple cases, resulting 
633
f1edd5ee1a12 more, including link
Chengsong
parents: 631
diff changeset
   894
ReDoS attacks if exposed to the internet.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   895
633
f1edd5ee1a12 more, including link
Chengsong
parents: 631
diff changeset
   896
The problems with both approaches are the motivation for us 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   897
to look again at the regular expression matching problem. 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   898
Another motivation is that regular expression matching algorithms
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   899
that follow the POSIX standard often contain errors and bugs 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   900
as we shall explain next.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   901
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   902
%We would like to have regex engines that can 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   903
%deal with the regular part (e.g.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   904
%bounded repetitions) of regexes more
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   905
%efficiently.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   906
%Also we want to make sure that they do it correctly.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   907
%It turns out that such aim is not so easy to achieve.
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   908
 %TODO: give examples such as RE2 GOLANG 1000 restriction, rust no repetitions 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   909
% For example, the Rust regex engine claims to be linear, 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   910
% but does not support lookarounds and back-references.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   911
% The GoLang regex library does not support over 1000 repetitions.  
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   912
% Java and Python both support back-references, but shows
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   913
%catastrophic backtracking behaviours on inputs without back-references(
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   914
%when the language is still regular).
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   915
 %TODO: test performance of Rust on (((((a*a*)b*)b){20})*)c  baabaabababaabaaaaaaaaababaaaababababaaaabaaabaaaaaabaabaabababaababaaaaaaaaababaaaababababaaaaaaaaaaaaac
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   916
 %TODO: verify the fact Rust does not allow 1000+ reps
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   917
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   918
605
Chengsong
parents: 604
diff changeset
   919
Chengsong
parents: 604
diff changeset
   920
Chengsong
parents: 604
diff changeset
   921
%The time cost of regex matching algorithms in general
Chengsong
parents: 604
diff changeset
   922
%involve two different phases, and different things can go differently wrong on 
Chengsong
parents: 604
diff changeset
   923
%these phases.
Chengsong
parents: 604
diff changeset
   924
%$\DFA$s usually have problems in the first (construction) phase
Chengsong
parents: 604
diff changeset
   925
%, whereas $\NFA$s usually run into trouble
Chengsong
parents: 604
diff changeset
   926
%on the second phase.
Chengsong
parents: 604
diff changeset
   927
Chengsong
parents: 604
diff changeset
   928
Chengsong
parents: 604
diff changeset
   929
\section{Error-prone POSIX Implementations}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   930
Very often there are multiple ways of matching a string
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   931
with a regular expression.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   932
In such cases the regular expressions matcher needs to
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   933
disambiguate.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   934
The more widely used strategy is called POSIX,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   935
which roughly speaking always chooses the longest initial match.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   936
The POSIX strategy is widely adopted in many regular expression matchers
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   937
because it is a natural strategy for lexers.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   938
However, many implementations (including the C libraries
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   939
used by Linux and OS X distributions) contain bugs
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   940
or do not meet the specification they claim to adhere to.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   941
Kuklewicz maintains a unit test repository which lists some
628
7af4e2420a8c ready to submit~~
Chengsong
parents: 622
diff changeset
   942
problems with existing regular expression engines \cite{KuklewiczHaskell}.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   943
In some cases, they either fail to generate a
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   944
result when there exists a match,
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   945
or give results that are inconsistent with the POSIX standard.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   946
A concrete example is the regex:
605
Chengsong
parents: 604
diff changeset
   947
\begin{center}
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   948
	$(aba + ab + a)^* \text{and the string} \; ababa$
605
Chengsong
parents: 604
diff changeset
   949
\end{center}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   950
The correct POSIX match for the above
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   951
involves the entire string $ababa$, 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   952
split into two Kleene star iterations, namely $[ab], [aba]$ at positions
605
Chengsong
parents: 604
diff changeset
   953
$[0, 2), [2, 5)$
Chengsong
parents: 604
diff changeset
   954
respectively.
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   955
But feeding this example to the different engines
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   956
listed at regex101 \footnote{
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   957
	regex101 is an online regular expression matcher which
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   958
	provides API for trying out regular expression
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   959
	engines of multiple popular programming languages like
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   960
Java, Python, Go, etc.} \parencite{regex101}. 
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   961
yields
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   962
only two incomplete matches: $[aba]$ at $[0, 3)$
605
Chengsong
parents: 604
diff changeset
   963
and $a$ at $[4, 5)$.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   964
Fowler \cite{fowler2003} and Kuklewicz \cite{KuklewiczHaskell} 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   965
commented that most regex libraries are not
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   966
correctly implementing the central POSIX
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   967
rule, called the maximum munch rule.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   968
Grathwohl \parencite{grathwohl2014crash} wrote:
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   969
\begin{quote}\it
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   970
	``The POSIX strategy is more complicated than the 
605
Chengsong
parents: 604
diff changeset
   971
	greedy because of the dependence on information about 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   972
	the length of matched strings in the various subexpressions.''
605
Chengsong
parents: 604
diff changeset
   973
\end{quote}
Chengsong
parents: 604
diff changeset
   974
%\noindent
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   975
We think the implementation complexity of POSIX rules also come from
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   976
the specification being not very precise.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
   977
The developers of the regexp package of Go 
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   978
\footnote{\url{https://pkg.go.dev/regexp\#pkg-overview}}
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   979
commented that
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   980
\begin{quote}\it
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   981
``
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   982
The POSIX rule is computationally prohibitive
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   983
and not even well-defined.
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   984
``
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
   985
\end{quote}
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   986
There are many informal summaries of this disambiguation
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   987
strategy, which are often quite long and delicate.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   988
For example Kuklewicz \cite{KuklewiczHaskell} 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   989
described the POSIX rule as (section 1, last paragraph):
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   990
\begin{quote}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   991
	\begin{itemize}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   992
		\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   993
regular expressions (REs) take the leftmost starting match, and the longest match starting there
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   994
earlier subpatterns have leftmost-longest priority over later subpatterns\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   995
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   996
higher-level subpatterns have leftmost-longest priority over their component subpatterns\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   997
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   998
REs have right associative concatenation which can be changed with parenthesis\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   999
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1000
parenthesized subexpressions return the match from their last usage\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1001
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1002
text of component subexpressions must be contained in the text of the 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1003
higher-level subexpressions\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1004
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1005
if "p" and "q" can never match the same text then "p|q" and "q|p" are equivalent, up to trivial renumbering of captured subexpressions\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1006
\item
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1007
if "p" in "p*" is used to capture non-empty text then additional repetitions of "p" will not capture an empty string\\
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1008
\end{itemize}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
  1009
\end{quote}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1010
%The text above 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1011
%is trying to capture something very precise,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1012
%and is crying out for formalising.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
  1013
Ausaf et al. \cite{AusafDyckhoffUrban2016}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1014
are the first to
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1015
give a quite simple formalised POSIX
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1016
specification in Isabelle/HOL, and also prove 
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1017
that their specification coincides with an earlier (unformalised) 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1018
POSIX specification given by Okui and Suzuki \cite{Okui10}.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
  1019
They then formally proved the correctness of
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
  1020
a lexing algorithm by Sulzmann and Lu \cite{Sulzmann2014}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1021
with regards to that specification.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1022
They also found that the informal POSIX
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1023
specification by Sulzmann and Lu needs to be substantially 
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1024
revised in order for the correctness proof to go through.
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1025
Their original specification and proof were unfixable
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1026
according to Ausaf et al.
605
Chengsong
parents: 604
diff changeset
  1027
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
  1028
In the next section, we will briefly
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1029
introduce Brzozowski derivatives and Sulzmann
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1030
and Lu's algorithm, which the main point of this thesis builds on.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1031
%We give a taste of what they 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1032
%are like and why they are suitable for regular expression
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1033
%matching and lexing.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1034
\section{Formal Specification of POSIX Matching 
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1035
and Brzozowski Derivatives}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1036
%Now we start with the central topic of the thesis: Brzozowski derivatives.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1037
Brzozowski \cite{Brzozowski1964} first introduced the 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1038
concept of a \emph{derivative} of regular expression in 1964.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1039
The derivative of a regular expression $r$
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1040
with respect to a character $c$, is written as $r \backslash c$.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1041
This operation tells us what $r$ transforms into
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1042
if we ``chop'' off a particular character $c$ 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1043
from all strings in the language of $r$ (defined
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1044
later as $L \; r$).
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1045
%To give a flavour of Brzozowski derivatives, we present
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1046
%two straightforward clauses from it:
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1047
%\begin{center}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1048
%	\begin{tabular}{lcl}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1049
%		$d \backslash c$     & $\dn$ & 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1050
%		$\mathit{if} \;c = d\;\mathit{then}\;\ONE\;\mathit{else}\;\ZERO$\\
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1051
%$(r_1 + r_2)\backslash c$     & $\dn$ & $r_1 \backslash c \,+\, r_2 \backslash c$\\
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1052
%	\end{tabular}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1053
%\end{center}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1054
%\noindent
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1055
%The first clause says that for the regular expression
636
0bcb4a7cb40c chap 1 all incorporated
Chengsong
parents: 635
diff changeset
  1056
%denoting a singleton set consisting of a single-character string $\{ d \}$,
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1057
%we check the derivative character $c$ against $d$,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1058
%returning a set containing only the empty string $\{ [] \}$
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1059
%if $c$ and $d$ are equal, and the empty set $\varnothing$ otherwise.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1060
%The second clause states that to obtain the regular expression
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1061
%representing all strings' head character $c$ being chopped off
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1062
%from $r_1 + r_2$, one simply needs to recursively take derivative
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1063
%of $r_1$ and $r_2$ and then put them together.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1064
Derivatives have the property
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1065
that $s \in L \; (r\backslash c)$ if and only if 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1066
$c::s \in L \; r$ where $::$ stands for list prepending.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1067
%This property can be used on regular expressions
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1068
%matching and lexing--to test whether a string $s$ is in $L \; r$,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1069
%one simply takes derivatives of $r$ successively with
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1070
%respect to the characters (in the correct order) in $s$,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1071
%and then test whether the empty string is in the last regular expression.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1072
With this property, derivatives can give a simple solution
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1073
to the problem of matching a string $s$ with a regular
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1074
expression $r$: if the derivative of $r$ w.r.t.\ (in
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1075
succession) all the characters of the string matches the empty string,
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1076
then $r$ matches $s$ (and {\em vice versa}).  
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1077
%This makes formally reasoning about these properties such
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1078
%as correctness and complexity smooth and intuitive.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1079
There are several mechanised proofs of this property in various theorem
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1080
provers,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1081
for example one by Owens and Slind \cite{Owens2008} in HOL4,
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1082
another one by Krauss and Nipkow \cite{Nipkow98} in Isabelle/HOL, and
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1083
yet another in Coq by Coquand and Siles \cite{Coquand2012}.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1084
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1085
In addition, one can extend derivatives to bounded repetitions
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1086
relatively straightforwardly. For example, the derivative for 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1087
this can be defined as:
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1088
\begin{center}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1089
	\begin{tabular}{lcl}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1090
		$r^{\{n\}} \backslash c$     & $\dn$ & $r \backslash c \cdot
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1091
		r^{\{n-1\}} (\text{when} n > 0)$\\
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1092
	\end{tabular}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1093
\end{center}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1094
\noindent
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1095
Experimental results suggest that  unlike DFA-based solutions
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1096
for bounded regular expressions,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1097
derivatives can cope
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1098
large counters
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1099
quite well.
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1100
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1101
There have also been 
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1102
extensions of derivatives to other regex constructs.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1103
For example, Owens et al include the derivatives
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1104
for the \emph{NOT} regular expression, which is
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1105
able to concisely express C-style comments of the form
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1106
$/* \ldots */$ (see \cite{Owens2008}).
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1107
Another extension for derivatives is
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1108
regular expressions with look-aheads, done
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1109
by Miyazaki and Minamide
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1110
\cite{Takayuki2019}.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1111
%We therefore use Brzozowski derivatives on regular expressions 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1112
%lexing 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1113
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1114
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1115
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1116
Given the above definitions and properties of
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1117
Brzozowski derivatives, one quickly realises their potential
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1118
in generating a formally verified algorithm for lexing: the clauses and property
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1119
can be easily expressed in a functional programming language 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1120
or converted to theorem prover
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1121
code, with great ease.
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1122
Perhaps this is the reason why derivatives have sparked quite a bit of interest
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1123
in the functional programming and theorem prover communities in the last
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1124
fifteen or so years (
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1125
\cite{Almeidaetal10}, \cite{Berglund14}, \cite{Berglund18},
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1126
\cite{Chen12} and \cite{Coquand2012}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1127
to name a few), despite being buried in the ``sands of time'' \cite{Owens2008}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1128
after they were first published by Brzozowski.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1129
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1130
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1131
However, there are two difficulties with derivative-based matchers:
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1132
First, Brzozowski's original matcher only generates a yes/no answer
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1133
for whether a regular expression matches a string or not.  This is too
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1134
little information in the context of lexing where separate tokens must
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1135
be identified and also classified (for example as keywords
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1136
or identifiers). 
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1137
Second, derivative-based matchers need to be more efficient in terms
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1138
of the sizes of derivatives.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1139
Elegant and beautiful
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1140
as many implementations are,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1141
they can be excruciatingly slow. 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1142
For example, Sulzmann and Lu
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1143
claim a linear running time of their proposed algorithm,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1144
but that was falsified by our experiments. The running time 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1145
is actually $\Omega(2^n)$ in the worst case.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1146
A similar claim about a theoretical runtime of $O(n^2)$ 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1147
is made for the Verbatim \cite{Verbatim}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1148
%TODO: give references
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1149
lexer, which calculates POSIX matches and is based on derivatives.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1150
They formalized the correctness of the lexer, but not their complexity result.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1151
In the performance evaluation section, they analyzed the run time
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1152
of matching $a$ with the string 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1153
\begin{center}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1154
	$\underbrace{a \ldots a}_{\text{n a's}}$.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1155
\end{center}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1156
\noindent
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1157
They concluded that the algorithm is quadratic in terms of 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1158
the length of the input string.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1159
When we tried out their extracted OCaml code with the example $(a+aa)^*$,
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1160
the time it took to match a string of 40 $a$'s was approximately 5 minutes.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1161
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1162
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1163
\subsection{Sulzmann and Lu's Algorithm}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1164
Sulzmann and Lu~\cite{Sulzmann2014} overcame the first 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1165
problem with the yes/no answer 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1166
by cleverly extending Brzozowski's matching
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1167
algorithm. Their extended version generates additional information on
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1168
\emph{how} a regular expression matches a string following the POSIX
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1169
rules for regular expression matching. They achieve this by adding a
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1170
second ``phase'' to Brzozowski's algorithm involving an injection
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1171
function. This injection function in a sense undoes the ``damage''
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1172
of the derivatives chopping off characters.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1173
In earlier work, Ausaf et al provided the formal
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1174
specification of what POSIX matching means and proved in Isabelle/HOL
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1175
the correctness
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1176
of this extended algorithm accordingly
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1177
\cite{AusafDyckhoffUrban2016}.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1178
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1179
The version of the algorithm proven correct
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1180
suffers however heavily from a 
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1181
second difficulty, where derivatives can
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1182
grow to arbitrarily big sizes. 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1183
For example if we start with the
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1184
regular expression $(a+aa)^*$ and take
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1185
successive derivatives according to the character $a$, we end up with
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1186
a sequence of ever-growing derivatives like 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1187
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1188
\def\ll{\stackrel{\_\backslash{} a}{\longrightarrow}}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1189
\begin{center}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1190
\begin{tabular}{rll}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1191
$(a + aa)^*$ & $\ll$ & $(\ONE + \ONE{}a) \cdot (a + aa)^*$\\
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1192
& $\ll$ & $(\ZERO + \ZERO{}a + \ONE) \cdot (a + aa)^* \;+\; (\ONE + \ONE{}a) \cdot (a + aa)^*$\\
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1193
& $\ll$ & $(\ZERO + \ZERO{}a + \ZERO) \cdot (a + aa)^* + (\ONE + \ONE{}a) \cdot (a + aa)^* \;+\; $\\
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1194
& & $\qquad(\ZERO + \ZERO{}a + \ONE) \cdot (a + aa)^* + (\ONE + \ONE{}a) \cdot (a + aa)^*$\\
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1195
& $\ll$ & \ldots \hspace{15mm}(regular expressions of sizes 98, 169, 283, 468, 767, \ldots)
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1196
\end{tabular}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1197
\end{center}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1198
 
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1199
\noindent where after around 35 steps we usually run out of memory on a
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1200
typical computer.  Clearly, the
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1201
notation involving $\ZERO$s and $\ONE$s already suggests
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1202
simplification rules that can be applied to regular regular
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1203
expressions, for example $\ZERO{}\,r \Rightarrow \ZERO$, $\ONE{}\,r
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1204
\Rightarrow r$, $\ZERO{} + r \Rightarrow r$ and $r + r \Rightarrow
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1205
r$. While such simple-minded simplifications have been proved in 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1206
the work by Ausaf et al. to preserve the correctness of Sulzmann and Lu's
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1207
algorithm \cite{AusafDyckhoffUrban2016}, they unfortunately do
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1208
\emph{not} help with limiting the growth of the derivatives shown
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1209
above: the growth is slowed, but the derivatives can still grow rather
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1210
quickly beyond any finite bound.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1211
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1212
Therefore we want to look in this thesis at a second
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1213
algorithm by Sulzmann and Lu where they
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1214
overcame this ``growth problem'' \cite{Sulzmann2014}.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1215
In this version, POSIX values are 
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1216
represented as bit sequences and such sequences are incrementally generated
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1217
when derivatives are calculated. The compact representation
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1218
of bit sequences and regular expressions allows them to define a more
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1219
``aggressive'' simplification method that keeps the size of the
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1220
derivatives finite no matter what the length of the string is.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1221
They make some informal claims about the correctness and linear behaviour
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1222
of this version, but do not provide any supporting proof arguments, not
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1223
even ``pencil-and-paper'' arguments. They write about their bit-coded
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1224
\emph{incremental parsing method} (that is the algorithm to be formalised
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1225
in this dissertation)
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1226
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1227
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1228
  
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1229
  \begin{quote}\it
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1230
  ``Correctness Claim: We further claim that the incremental parsing
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1231
  method [..] in combination with the simplification steps [..]
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1232
  yields POSIX parse trees. We have tested this claim
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1233
  extensively [..] but yet
cc54ce075db5 restructured
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parents:
diff changeset
  1234
  have to work out all proof details.'' \cite[Page 14]{Sulzmann2014}
cc54ce075db5 restructured
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parents:
diff changeset
  1235
\end{quote}  
622
4b1149fb5aec incorporated more comments, bib
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parents: 620
diff changeset
  1236
Ausaf and Urban made some initial progress towards the 
4b1149fb5aec incorporated more comments, bib
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parents: 620
diff changeset
  1237
full correctness proof but still had to leave out the optimisation
4b1149fb5aec incorporated more comments, bib
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parents: 620
diff changeset
  1238
Sulzmann and Lu proposed.
4b1149fb5aec incorporated more comments, bib
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parents: 620
diff changeset
  1239
Ausaf  wrote \cite{Ausaf},
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1240
  \begin{quote}\it
609
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1241
``The next step would be to implement a more aggressive simplification procedure on annotated regular expressions and then prove the corresponding algorithm generates the same values as blexer. Alas due to time constraints we are unable to do so here.''
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1242
\end{quote}  
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1243
This thesis implements the aggressive simplifications envisioned
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1244
by Ausaf and Urban,
622
4b1149fb5aec incorporated more comments, bib
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parents: 620
diff changeset
  1245
together with a formal proof of the correctness of those simplifications.
532
cc54ce075db5 restructured
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diff changeset
  1246
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1247
612
Chengsong
parents: 609
diff changeset
  1248
One of the most recent work in the context of lexing
Chengsong
parents: 609
diff changeset
  1249
%with this issue
630
d50a309a0645 with Christian
Chengsong
parents: 628
diff changeset
  1250
is the Verbatim lexer by Egolf, Lasser and Fisher~\cite{Verbatim}.
612
Chengsong
parents: 609
diff changeset
  1251
This is relevant work for us and we will compare it later with 
Chengsong
parents: 609
diff changeset
  1252
our derivative-based matcher we are going to present.
Chengsong
parents: 609
diff changeset
  1253
There is also some newer work called
630
d50a309a0645 with Christian
Chengsong
parents: 628
diff changeset
  1254
Verbatim++~\cite{Verbatimpp}, which does not use derivatives, 
612
Chengsong
parents: 609
diff changeset
  1255
but deterministic finite automaton instead.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1256
We will also study this work in a later section.
612
Chengsong
parents: 609
diff changeset
  1257
%An example that gives problem to automaton approaches would be
Chengsong
parents: 609
diff changeset
  1258
%the regular expression $(a|b)^*a(a|b)^{\{n\}}$.
Chengsong
parents: 609
diff changeset
  1259
%It requires at least $2^{n+1}$ states to represent
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parents: 609
diff changeset
  1260
%as a DFA.
Chengsong
parents: 609
diff changeset
  1261
Chengsong
parents: 609
diff changeset
  1262
532
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  1263
%----------------------------------------------------------------------------------------
cc54ce075db5 restructured
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parents:
diff changeset
  1264
\section{Contribution}
cc54ce075db5 restructured
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parents:
diff changeset
  1265
609
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1266
In this thesis,
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1267
we propose a solution to catastrophic
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1268
backtracking and error-prone matchers: a formally verified
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1269
regular expression lexing algorithm
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1270
that is both fast
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1271
and correct. 
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1272
The result is %a regular expression lexing algorithm that comes with 
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1273
\begin{itemize}
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1274
\item
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1275
an improved version of  Sulzmann and Lu's bit-coded algorithm using 
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1276
derivatives with simplifications, 
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1277
accompanied by
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1278
a proven correctness theorem according to POSIX specification 
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1279
given by Ausaf et al. \cite{AusafDyckhoffUrban2016}, 
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1280
\item 
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1281
a complexity-related property for that algorithm saying that the 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1282
internal data structure will
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1283
remain below a finite bound,
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1284
\item
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1285
and an extension to
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1286
the bounded repetition constructs with the correctness and finiteness property
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1287
maintained.
622
4b1149fb5aec incorporated more comments, bib
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parents: 620
diff changeset
  1288
\end{itemize}
4b1149fb5aec incorporated more comments, bib
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parents: 620
diff changeset
  1289
\noindent
609
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1290
With a formal finiteness bound in place,
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1291
we can greatly reduce the attack surface of servers in terms of ReDoS attacks.
631
Chengsong
parents: 630
diff changeset
  1292
The Isabelle/HOL code for our formalisation can be 
Chengsong
parents: 630
diff changeset
  1293
found at
Chengsong
parents: 630
diff changeset
  1294
\begin{center}
Chengsong
parents: 630
diff changeset
  1295
\url{https://github.com/hellotommmy/posix}
Chengsong
parents: 630
diff changeset
  1296
\end{center}
609
61139fdddae0 chap1 totally done
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parents: 608
diff changeset
  1297
Further improvements to the algorithm with an even stronger version of 
631
Chengsong
parents: 630
diff changeset
  1298
simplification can be made. We conjecture that the resulting size of derivatives
Chengsong
parents: 630
diff changeset
  1299
can be bounded by a cubic bound w.r.t. the size of the regular expression.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1300
We will give relevant code in Scala, 
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1301
but do not give a formal proof for that in Isabelle/HOL.
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1302
This is still future work.
532
cc54ce075db5 restructured
Chengsong
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diff changeset
  1303
cc54ce075db5 restructured
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  1304
cc54ce075db5 restructured
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  1305
\section{Structure of the thesis}
622
4b1149fb5aec incorporated more comments, bib
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parents: 620
diff changeset
  1306
In chapter \ref{Inj} we will introduce the concepts
532
cc54ce075db5 restructured
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  1307
and notations we 
622
4b1149fb5aec incorporated more comments, bib
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diff changeset
  1308
use for describing regular expressions and derivatives,
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1309
and the first version of Sulzmann and Lu's lexing algorithm without bitcodes (including 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1310
its correctness proof).
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1311
We will give their second lexing algorithm with bitcodes in \ref{Bitcoded1}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1312
together with the correctness proof by Ausaf and Urban.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1313
Then we illustrate in chapter \ref{Bitcoded2}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1314
how Sulzmann and Lu's
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1315
simplifications fail to simplify correctly. We therefore introduce our own version of the
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1316
algorithm with correct simplifications and 
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1317
their correctness proof.  
622
4b1149fb5aec incorporated more comments, bib
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diff changeset
  1318
In chapter \ref{Finite} we give the second guarantee
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1319
of our bitcoded algorithm, that is a finite bound on the size of any 
631
Chengsong
parents: 630
diff changeset
  1320
regular expression's derivatives. 
Chengsong
parents: 630
diff changeset
  1321
We also show how one can extend the
Chengsong
parents: 630
diff changeset
  1322
algorithm to include bounded repetitions. 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1323
In chapter \ref{Cubic} we discuss stronger simplification rules which 
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1324
improve the finite bound to a cubic bound. %and the NOT regular expression.
637
Chengsong
parents: 636
diff changeset
  1325
Chapter \ref{RelatedWork} introduces relevant work for this thesis.
638
dd9dde2d902b comments till chap4
Chengsong
parents: 637
diff changeset
  1326
Chapter \ref{Future} concludes and mentions avenues of future research.
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1327
 
cc54ce075db5 restructured
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cc54ce075db5 restructured
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  1330
cc54ce075db5 restructured
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  1331
cc54ce075db5 restructured
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diff changeset
  1332
%----------------------------------------------------------------------------------------
cc54ce075db5 restructured
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parents:
diff changeset
  1333
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1334
cc54ce075db5 restructured
Chengsong
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diff changeset
  1335
%----------------------------------------------------------------------------------------
cc54ce075db5 restructured
Chengsong
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diff changeset
  1336
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1337
%----------------------------------------------------------------------------------------
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1338
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1339
%----------------------------------------------------------------------------------------
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1340
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1341