ChengsongTanPhdThesis/Chapters/Introduction.tex
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% Chapter 1
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\chapter{Introduction} % Main chapter title
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\label{Introduction} % For referencing the chapter elsewhere, use \ref{Chapter1} 
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%----------------------------------------------------------------------------------------
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% Define some commands to keep the formatting separated from the content 
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\newcommand{\keyword}[1]{\textbf{#1}}
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\newcommand{\tabhead}[1]{\textbf{#1}}
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\newcommand{\code}[1]{\texttt{#1}}
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\newcommand{\file}[1]{\texttt{\bfseries#1}}
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\newcommand{\option}[1]{\texttt{\itshape#1}}
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%boxes
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\newcommand*{\mybox}[1]{\framebox{\strut #1}}
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%\newcommand{\sflataux}[1]{\textit{sflat}\_\textit{aux} \, #1}
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\newcommand\sflat[1]{\llparenthesis #1 \rrparenthesis }
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\newcommand{\ASEQ}[3]{\textit{ASEQ}_{#1} \, #2 \, #3}
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\newcommand{\bderssimp}[2]{#1 \backslash_{bsimps} #2}
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\newcommand{\rderssimp}[2]{#1 \backslash_{rsimps} #2}
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\def\derssimp{\textit{ders}\_\textit{simp}}
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\def\rders{\textit{rders}}
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\newcommand{\bders}[2]{#1 \backslash #2}
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\newcommand{\bsimp}[1]{\textit{bsimp}(#1)}
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\def\bsimps{\textit{bsimp}}
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\newcommand{\rsimp}[1]{\textit{rsimp}\; #1}
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\newcommand{\sflataux}[1]{\llparenthesis #1 \rrparenthesis'}
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\newcommand{\dn}{\stackrel{\mbox{\scriptsize def}}{=}}%
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\newcommand{\ONE}{\mbox{\bf 1}}
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\newcommand{\AALTS}[2]{\oplus {\scriptstyle #1}\, #2}
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\newcommand{\rdistinct}[2]{\textit{rdistinct} \;\; #1 \;\; #2}
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\def\rdistincts{\textit{rdistinct}}
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\def\rDistinct{\textit{rdistinct}}
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\newcommand\hflat[1]{\llparenthesis  #1 \rrparenthesis_*}
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\newcommand\createdByStar[1]{\textit{createdByStar}(#1)}
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\def\cbn{\textit{createdByNtimes}}
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\def\hpa{\textit{highestPowerAux}}
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\def\hpower{\textit{highestPower}}
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\def\ntset{\textit{ntset}}
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\def\optermsimp{\textit{optermsimp}}
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\def\optermOsimp{\textit{optermOsimp}}
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\def\optermosimp{\textit{optermosimp}}
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\def\opterm{\textit{opterm}}
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\def\nString{\textit{nonemptyString}}
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\newcommand\myequiv{\mathrel{\stackrel{\makebox[0pt]{\mbox{\normalfont\tiny equiv}}}{=}}}
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\def\SEQ{\textit{SEQ}}
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\def\SEQs{\textit{SEQs}}
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\def\case{\textit{case}}
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\def\sequal{\stackrel{\mbox{\scriptsize rsimp}}{=}}
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\def\rsimpalts{\textit{rsimp}_{ALTS}}
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\def\good{\textit{good}}
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\def\btrue{\textit{true}}
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\def\bfalse{\textit{false}}
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\def\bnullable{\textit{bnullable}}
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\def\bnullables{\textit{bnullables}}
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\def\Some{\textit{Some}}
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\def\None{\textit{None}}
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\def\code{\textit{code}}
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\def\decode{\textit{decode}}
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\def\internalise{\textit{internalise}}
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\def\lexer{\mathit{lexer}}
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\def\mkeps{\textit{mkeps}}
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\def\rerases{\textit{rerase}}
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\def\nonnested{\textit{nonnested}}
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\def\AZERO{\textit{AZERO}}
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\def\AONE{\textit{AONE}}
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\def\ACHAR{\textit{ACHAR}}
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\def\simpsulz{\textit{simp}_{Sulz}}
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\def\scfrewrites{\stackrel{*}{\rightsquigarrow_{scf}}}
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\def\frewrites{\stackrel{*}{\rightsquigarrow_f}}
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\def\fuse{\textit{fuse}}
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\def\bder{\textit{bder}}
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\def\POSIX{\textit{POSIX}}
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\def\ALTS{\textit{ALTS}}
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\def\ASTAR{\textit{ASTAR}}
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\def\DFA{\textit{DFA}}
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\def\bmkeps{\textit{bmkeps}}
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\def\retrieve{\textit{retrieve}}
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\def\flex{\textit{flex}}
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\def\Empty{\textit{Empty}}
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\def\Left{\textit{Left}}
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\def\Right{\textit{Right}}
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\def\Stars{\textit{Stars}}
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\def\Char{\textit{Char}}
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\def\Seq{\textit{Seq}}
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\def\Der{\textit{Der}}
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\def\nullable{\mathit{nullable}}
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\def\Z{\mathit{Z}}
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\def\rup{r^\uparrow}
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%\def\bderssimp{\mathit{bders}\_\mathit{simp}}
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\def\distinctWith{\textit{distinctWith}}
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\def\lf{\textit{lf}}
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\def\PD{\textit{PD}}
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\def\suffix{\textit{Suffix}}
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\def\nupdate{\textit{nupdate}}
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\def\size{\mathit{size}}
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\def\rexp{\mathbf{rexp}}
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\def\simp{\mathit{simp}}
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\def\simpALTs{\mathit{simp}\_\mathit{ALTs}}
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\def\map{\mathit{map}}
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\def\blexersimp{\mathit{blexer}\_\mathit{simp}}
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\def\blexerStrong{\textit{blexerStrong}}
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\def\bsimpStrong{\textit{bsimpStrong}}
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\def\bdersStrongs{\textit{bdersStrong}}
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\newcommand{\bdersStrong}[2]{#1 \backslash_{bsimpStrongs} #2}
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\def\rrexp{\textit{rrexp}}
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\newcommand\rnullable[1]{\textit{rnullable} \; #1 }
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\newcommand\ChristianComment[1]{\textcolor{blue}{#1}\\}
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\def\rflts{\textit{rflts}}
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\def\rrewrite{\textit{rrewrite}}
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\def\bsimpalts{\textit{bsimp}_{ALTS}}
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\def\bsimpaseq{\textit{bsimp}_{ASEQ}}
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\def\rsimlalts{\textit{rsimp}_{ALTs}}
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\def\rsimpseq{\textit{rsimp}_{SEQ}}
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\def\erase{\textit{erase}}
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\def\STAR{\textit{STAR}}
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\def\zeroable{\textit{zeroable}}
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%\def\not{\textit{not}}
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\def\RZERO{\mathbf{0}_r }
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\def\RONE{\mathbf{1}_r}
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\newcommand\RCHAR[1]{\mathbf{#1}_r}
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\newcommand\RSEQ[2]{#1 \cdot #2}
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\newcommand\RALTS[1]{\sum #1}
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\newcommand\RSTAR[1]{#1^*}
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\newcommand\vsuf[2]{\textit{Suffix} \;#1\;#2}
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\lstdefinestyle{myScalastyle}{
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  frame=tb,
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  language=scala,
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  aboveskip=3mm,
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  belowskip=3mm,
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  showstringspaces=false,
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  columns=flexible,
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  basicstyle={\small\ttfamily},
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  numbers=none,
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  numberstyle=\tiny\color{gray},
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  keywordstyle=\color{blue},
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  commentstyle=\color{dkgreen},
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  stringstyle=\color{mauve},
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  frame=single,
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  breaklines=true,
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  breakatwhitespace=true,
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  tabsize=3,
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}
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%----------------------------------------------------------------------------------------
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%This part is about regular expressions, Brzozowski derivatives,
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%and a bit-coded lexing algorithm with proven correctness and time bounds.
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%TODO: look up snort rules to use here--give readers idea of what regexes look like
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Regular expressions are widely used in computer science: 
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be it in text-editors \parencite{atomEditor} with syntax highlighting and auto-completion;
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command-line tools like $\mathit{grep}$ that facilitate easy 
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text-processing; network intrusion
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detection systems that inspect suspicious traffic; or compiler
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front ends.
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Given their usefulness and ubiquity, one would assume that
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modern regular expression matching implementations
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are mature and fully studied.
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Indeed, in a popular programming language's regex engine, 
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supplying it with regular expressions and strings,
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in most cases one can
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get the matching information in a very short time.
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Those matchers can be blindingly fast--some 
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network intrusion detection systems
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use regex engines that are able to process 
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megabytes or even gigabytes of data per second \parencite{Turo_ov__2020}.
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However, those matchers can exhibit a surprising security vulnerability
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under a certain class of inputs.
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%However, , this is not the case for $\mathbf{all}$ inputs.
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%TODO: get source for SNORT/BRO's regex matching engine/speed
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Consider $(a^*)^*\,b$ and ask whether
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strings of the form $aa..a$ can be matched by this regular
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expression. Obviously this is not the case---the expected $b$ in the last
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position is missing. One would expect that modern regular expression
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matching engines can find this out very quickly. Surprisingly, if one tries
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this example in JavaScript, Python or Java 8, even with small strings, 
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say of lenght of around 30 $a$'s,
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the decision takes an absurd time to finish (see graphs in figure \ref{fig:aStarStarb}).
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This is clearly exponential behaviour, and 
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is triggered by some relatively simple regular expressions.
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Java 9 and newer
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versions improve this behaviour somewhat, but is still slow compared 
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with the approach we are going to use in this thesis.
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This superlinear blowup in regular expression engines
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had repeatedly caused grief in ``real life'' where it is 
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given the name ``catastrophic backtracking'' or ``evil'' regular expressions.
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For example, on 20 July 2016 one evil
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regular expression brought the webpage
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\href{http://stackexchange.com}{Stack Exchange} to its
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knees.\footnote{\url{https://stackstatus.net/post/147710624694/outage-postmortem-july-20-2016}(Last accessed in 2019)}
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In this instance, a regular expression intended to just trim white
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spaces from the beginning and the end of a line actually consumed
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massive amounts of CPU resources---causing web servers to grind to a
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halt. In this example, the time needed to process
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the string was $O(n^2)$ with respect to the string length. This
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quadratic overhead was enough for the homepage of Stack Exchange to
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respond so slowly that the load balancer assumed a $\mathit{DoS}$ 
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attack and therefore stopped the servers from responding to any
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requests. This made the whole site become unavailable. 
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\begin{figure}[p]
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\begin{tabular}{@{}c@{\hspace{0mm}}c@{}}
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={JavaScript},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[red,mark=*, mark options={fill=white}] table {re-js.data};
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\end{axis}
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\end{tikzpicture}
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  &
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    %ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Python},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[blue,mark=*, mark options={fill=white}] table {re-python2.data};
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\end{axis}
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\end{tikzpicture}\\ 
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Java 8},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[cyan,mark=*, mark options={fill=white}] table {re-java.data};
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\end{axis}
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\end{tikzpicture}
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  &
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    %ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Dart},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[green,mark=*, mark options={fill=white}] table {re-dart.data};
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\end{axis}
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\end{tikzpicture}\\ 
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    ylabel={time in secs},
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    enlargelimits=false,
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    xtick={0,5,...,30},
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    xmax=33,
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    ymax=35,
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    ytick={0,5,...,30},
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    scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Swift},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[purple,mark=*, mark options={fill=white}] table {re-swift.data};
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\end{axis}
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\end{tikzpicture}
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  & 
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\begin{tikzpicture}
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\begin{axis}[
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    xlabel={$n$},
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    x label style={at={(1.05,-0.05)}},
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    %ylabel={time in secs},
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    enlargelimits=true,
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    %xtick={0,5000,...,40000},
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    %xmax=40000,
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    %ymax=35,
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    restrict x to domain*=0:40000,
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    restrict y to domain*=0:35,
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    %ytick={0,5,...,30},
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    %scaled ticks=false,
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    axis lines=left,
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    width=5cm,
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    height=4cm, 
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    legend entries={Java9+},  
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    legend pos=north west,
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    legend cell align=left]
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\addplot[orange,mark=*, mark options={fill=white}] table {re-java9.data};
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\end{axis}
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\end{tikzpicture}\\ 
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\multicolumn{2}{c}{Graphs}
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\end{tabular}    
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\caption{Graphs showing runtime for matching $(a^*)^*\,b$ with strings 
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           of the form $\protect\underbrace{aa..a}_{n}$ in various existing regular expression libraries.
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   The reason for their superlinear behaviour is that they do a depth-first-search
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   using NFAs.
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   If the string does not match, the regular expression matching
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   engine starts to explore all possibilities. 
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}\label{fig:aStarStarb}
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\end{figure}\afterpage{\clearpage}
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A more recent example is a global outage of all Cloudflare servers on 2 July
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2019. A poorly written regular expression exhibited catastrophic backtracking
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and exhausted CPUs that serve HTTP traffic. Although the outage
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had several causes, at the heart was a regular expression that
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was used to monitor network
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traffic.\footnote{\url{https://blog.cloudflare.com/details-of-the-cloudflare-outage-on-july-2-2019/}(Last accessed in 2022)}
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These problems with regular expressions 
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are not isolated events that happen
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very occasionally, but actually widespread.
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They occur so often that they have a 
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name: Regular-Expression-Denial-Of-Service (ReDoS)
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attack.
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\citeauthor{Davis18} detected more
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than 1000 evil regular expressions
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in Node.js, Python core libraries, npm and in pypi. 
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They therefore concluded that evil regular expressions
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are real problems rather than "a parlour trick".
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This work aims to address this issue
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with the help of formal proofs.
612
Chengsong
parents: 609
diff changeset
   425
We describe a lexing algorithm based
Chengsong
parents: 609
diff changeset
   426
on Brzozowski derivatives with verified correctness (in 
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   427
Isabelle/HOL)
612
Chengsong
parents: 609
diff changeset
   428
and a finiteness property.
Chengsong
parents: 609
diff changeset
   429
Such properties %guarantee the absence of 
Chengsong
parents: 609
diff changeset
   430
are an important step in preventing
Chengsong
parents: 609
diff changeset
   431
catastrophic backtracking once and for all.
604
Chengsong
parents: 603
diff changeset
   432
We will give more details in the next sections
Chengsong
parents: 603
diff changeset
   433
on (i) why the slow cases in graph \ref{fig:aStarStarb}
612
Chengsong
parents: 609
diff changeset
   434
can occur in traditional regular expression engines
604
Chengsong
parents: 603
diff changeset
   435
and (ii) why we choose our 
612
Chengsong
parents: 609
diff changeset
   436
approach based on Brzozowski derivatives and formal proofs.
602
Chengsong
parents: 601
diff changeset
   437
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   438
612
Chengsong
parents: 609
diff changeset
   439
\section{Preliminaries}%Regex, and the Problems with Regex Matchers}
601
Chengsong
parents: 600
diff changeset
   440
Regular expressions and regular expression matchers 
Chengsong
parents: 600
diff changeset
   441
have of course been studied for many, many years.
612
Chengsong
parents: 609
diff changeset
   442
Theoretical results in automata theory state 
604
Chengsong
parents: 603
diff changeset
   443
that basic regular expression matching should be linear
605
Chengsong
parents: 604
diff changeset
   444
w.r.t the input.
Chengsong
parents: 604
diff changeset
   445
This assumes that the regular expression
Chengsong
parents: 604
diff changeset
   446
$r$ was pre-processed and turned into a
612
Chengsong
parents: 609
diff changeset
   447
deterministic finite automaton (DFA) before matching\cite{Sakarovitch2009}.
604
Chengsong
parents: 603
diff changeset
   448
By basic we mean textbook definitions such as the one
612
Chengsong
parents: 609
diff changeset
   449
below, involving only regular expressions for characters, alternatives,
604
Chengsong
parents: 603
diff changeset
   450
sequences, and Kleene stars:
Chengsong
parents: 603
diff changeset
   451
\[
612
Chengsong
parents: 609
diff changeset
   452
	r ::= c | r_1 + r_2 | r_1 \cdot r_2 | r^*
604
Chengsong
parents: 603
diff changeset
   453
\]
Chengsong
parents: 603
diff changeset
   454
Modern regular expression matchers used by programmers,
Chengsong
parents: 603
diff changeset
   455
however,
612
Chengsong
parents: 609
diff changeset
   456
support much richer constructs, such as bounded repetitions
604
Chengsong
parents: 603
diff changeset
   457
and back-references.
612
Chengsong
parents: 609
diff changeset
   458
To differentiate, we use the word \emph{regex} to refer
605
Chengsong
parents: 604
diff changeset
   459
to those expressions with richer constructs while reserving the
Chengsong
parents: 604
diff changeset
   460
term \emph{regular expression}
Chengsong
parents: 604
diff changeset
   461
for the more traditional meaning in formal languages theory.
Chengsong
parents: 604
diff changeset
   462
We follow this convention 
Chengsong
parents: 604
diff changeset
   463
in this thesis.
Chengsong
parents: 604
diff changeset
   464
In the future, we aim to support all the popular features of regexes, 
612
Chengsong
parents: 609
diff changeset
   465
but for this work we mainly look at basic regular expressions
Chengsong
parents: 609
diff changeset
   466
and bounded repetitions.
604
Chengsong
parents: 603
diff changeset
   467
605
Chengsong
parents: 604
diff changeset
   468
Chengsong
parents: 604
diff changeset
   469
Chengsong
parents: 604
diff changeset
   470
%Most modern regex libraries
Chengsong
parents: 604
diff changeset
   471
%the so-called PCRE standard (Peral Compatible Regular Expressions)
Chengsong
parents: 604
diff changeset
   472
%has the back-references
612
Chengsong
parents: 609
diff changeset
   473
Regexes come with a number of constructs
605
Chengsong
parents: 604
diff changeset
   474
that make it more convenient for 
604
Chengsong
parents: 603
diff changeset
   475
programmers to write regular expressions.
612
Chengsong
parents: 609
diff changeset
   476
Depending on the types of constructs
605
Chengsong
parents: 604
diff changeset
   477
the task of matching and lexing with them
612
Chengsong
parents: 609
diff changeset
   478
will have different levels of complexity.
Chengsong
parents: 609
diff changeset
   479
Some of those constructs are just syntactic sugars that are
604
Chengsong
parents: 603
diff changeset
   480
simply short hand notations
605
Chengsong
parents: 604
diff changeset
   481
that save the programmers a few keystrokes.
612
Chengsong
parents: 609
diff changeset
   482
These will not cause problems for regex libraries.
605
Chengsong
parents: 604
diff changeset
   483
For example the
612
Chengsong
parents: 609
diff changeset
   484
non-binary alternative involving three or more choices just means:
604
Chengsong
parents: 603
diff changeset
   485
\[
605
Chengsong
parents: 604
diff changeset
   486
	(a | b | c) \stackrel{means}{=} ((a + b)+ c)
604
Chengsong
parents: 603
diff changeset
   487
\]
612
Chengsong
parents: 609
diff changeset
   488
Similarly, the range operator used to express the alternative
Chengsong
parents: 609
diff changeset
   489
of all characters between its operands is just a concise way:
604
Chengsong
parents: 603
diff changeset
   490
\[
605
Chengsong
parents: 604
diff changeset
   491
	[0~-9]\stackrel{means}{=} (0 | 1 | \ldots | 9 ) \; \text{(all number digits)}
604
Chengsong
parents: 603
diff changeset
   492
\]
612
Chengsong
parents: 609
diff changeset
   493
for an alternative. The
Chengsong
parents: 609
diff changeset
   494
wildcard character $.$ is used to refer to any single character,
605
Chengsong
parents: 604
diff changeset
   495
\[
Chengsong
parents: 604
diff changeset
   496
	. \stackrel{means}{=} [0-9a-zA-Z+-()*\&\ldots]
Chengsong
parents: 604
diff changeset
   497
\]
612
Chengsong
parents: 609
diff changeset
   498
except the newline.
604
Chengsong
parents: 603
diff changeset
   499
605
Chengsong
parents: 604
diff changeset
   500
\subsection{Bounded Repetitions}
612
Chengsong
parents: 609
diff changeset
   501
More interesting are bounded repetitions, which can 
Chengsong
parents: 609
diff changeset
   502
make the regular expressions much
605
Chengsong
parents: 604
diff changeset
   503
more compact.
612
Chengsong
parents: 609
diff changeset
   504
There are 
Chengsong
parents: 609
diff changeset
   505
$r^{\{n\}}$, $r^{\{\ldots m\}}$, $r^{\{n\ldots \}}$ and $r^{\{n\ldots m\}}$
Chengsong
parents: 609
diff changeset
   506
(where $n$ and $m$ are constant natural numbers).
Chengsong
parents: 609
diff changeset
   507
Like the star regular expressions, the set of strings or language
Chengsong
parents: 609
diff changeset
   508
a bounded regular expression can match
Chengsong
parents: 609
diff changeset
   509
is defined using the power operation on sets:
605
Chengsong
parents: 604
diff changeset
   510
\begin{center}
Chengsong
parents: 604
diff changeset
   511
	\begin{tabular}{lcl}
Chengsong
parents: 604
diff changeset
   512
		$L \; r^{\{n\}}$ & $\dn$ & $(L \; r)^n$\\
Chengsong
parents: 604
diff changeset
   513
		$L \; r^{\{\ldots m\}}$ & $\dn$ & $\bigcup_{0 \leq i \leq m}. (L \; r)^i$\\
Chengsong
parents: 604
diff changeset
   514
		$L \; r^{\{n\ldots \}}$ & $\dn$ & $\bigcup_{n \leq i}. (L \; r)^i$\\
Chengsong
parents: 604
diff changeset
   515
		$L \; r^{\{n \ldots m\}}$ & $\dn$ & $\bigcup_{n \leq i \leq m}. (L \; r)^i$
Chengsong
parents: 604
diff changeset
   516
	\end{tabular}
Chengsong
parents: 604
diff changeset
   517
\end{center}
612
Chengsong
parents: 609
diff changeset
   518
The attraction of bounded repetitions is that they can be
Chengsong
parents: 609
diff changeset
   519
used to avoid a blow up: for example $r^{\{n\}}$
Chengsong
parents: 609
diff changeset
   520
is a shorthand for
605
Chengsong
parents: 604
diff changeset
   521
\[
Chengsong
parents: 604
diff changeset
   522
	\underbrace{r\ldots r}_\text{n copies of r}.
Chengsong
parents: 604
diff changeset
   523
\]
Chengsong
parents: 604
diff changeset
   524
%Therefore, a naive algorithm that simply unfolds
Chengsong
parents: 604
diff changeset
   525
%them into their desugared forms
Chengsong
parents: 604
diff changeset
   526
%will suffer from at least an exponential runtime increase.
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   527
612
Chengsong
parents: 609
diff changeset
   528
Chengsong
parents: 609
diff changeset
   529
The problem with matching 
Chengsong
parents: 609
diff changeset
   530
is that tools based on the classic notion of
Chengsong
parents: 609
diff changeset
   531
automata need to expand $r^{\{n\}}$ into $n$ connected 
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   532
copies of the automaton for $r$. This leads to very inefficient matching
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   533
algorithms  or algorithms that consume large amounts of memory.
605
Chengsong
parents: 604
diff changeset
   534
Implementations using $\DFA$s will
Chengsong
parents: 604
diff changeset
   535
either become excruciatingly slow 
Chengsong
parents: 604
diff changeset
   536
(for example Verbatim++\cite{Verbatimpp}) or get
Chengsong
parents: 604
diff changeset
   537
out of memory errors (for example $\mathit{LEX}$ and 
Chengsong
parents: 604
diff changeset
   538
$\mathit{JFLEX}$\footnote{which are lexer generators
Chengsong
parents: 604
diff changeset
   539
in C and JAVA that generate $\mathit{DFA}$-based
Chengsong
parents: 604
diff changeset
   540
lexers. The user provides a set of regular expressions
Chengsong
parents: 604
diff changeset
   541
and configurations to them, and then 
Chengsong
parents: 604
diff changeset
   542
gets an output program encoding a minimized $\mathit{DFA}$
Chengsong
parents: 604
diff changeset
   543
that can be compiled and run. 
Chengsong
parents: 604
diff changeset
   544
When given the above countdown regular expression,
Chengsong
parents: 604
diff changeset
   545
a small $n$ (a few dozen) would result in a 
Chengsong
parents: 604
diff changeset
   546
determinised automata
612
Chengsong
parents: 609
diff changeset
   547
with millions of states.}) for large counters.
Chengsong
parents: 609
diff changeset
   548
A classic example for this phenomenon is the regular expression $(a+b)^*  a (a+b)^{n}$
605
Chengsong
parents: 604
diff changeset
   549
where the minimal DFA requires at least $2^{n+1}$ states.
Chengsong
parents: 604
diff changeset
   550
For example, when $n$ is equal to 2,
612
Chengsong
parents: 609
diff changeset
   551
The corresponding $\mathit{NFA}$ looks like:
604
Chengsong
parents: 603
diff changeset
   552
\begin{center}
Chengsong
parents: 603
diff changeset
   553
\begin{tikzpicture}[shorten >=1pt,node distance=2cm,on grid,auto] 
Chengsong
parents: 603
diff changeset
   554
   \node[state,initial] (q_0)   {$q_0$}; 
Chengsong
parents: 603
diff changeset
   555
   \node[state, red] (q_1) [right=of q_0] {$q_1$}; 
Chengsong
parents: 603
diff changeset
   556
   \node[state, red] (q_2) [right=of q_1] {$q_2$}; 
Chengsong
parents: 603
diff changeset
   557
   \node[state, accepting, red](q_3) [right=of q_2] {$q_3$};
Chengsong
parents: 603
diff changeset
   558
    \path[->] 
Chengsong
parents: 603
diff changeset
   559
    (q_0) edge  node {a} (q_1)
Chengsong
parents: 603
diff changeset
   560
    	  edge [loop below] node {a,b} ()
Chengsong
parents: 603
diff changeset
   561
    (q_1) edge  node  {a,b} (q_2)
Chengsong
parents: 603
diff changeset
   562
    (q_2) edge  node  {a,b} (q_3);
Chengsong
parents: 603
diff changeset
   563
\end{tikzpicture}
Chengsong
parents: 603
diff changeset
   564
\end{center}
612
Chengsong
parents: 609
diff changeset
   565
when turned into a DFA by the subset construction
Chengsong
parents: 609
diff changeset
   566
requires at least $2^3$ states.\footnote{The 
605
Chengsong
parents: 604
diff changeset
   567
red states are "countdown states" which counts down 
604
Chengsong
parents: 603
diff changeset
   568
the number of characters needed in addition to the current
Chengsong
parents: 603
diff changeset
   569
string to make a successful match.
Chengsong
parents: 603
diff changeset
   570
For example, state $q_1$ indicates a match that has
Chengsong
parents: 603
diff changeset
   571
gone past the $(a|b)^*$ part of $(a|b)^*a(a|b)^{\{2\}}$,
Chengsong
parents: 603
diff changeset
   572
and just consumed the "delimiter" $a$ in the middle, and 
Chengsong
parents: 603
diff changeset
   573
need to match 2 more iterations of $(a|b)$ to complete.
Chengsong
parents: 603
diff changeset
   574
State $q_2$ on the other hand, can be viewed as a state
Chengsong
parents: 603
diff changeset
   575
after $q_1$ has consumed 1 character, and just waits
Chengsong
parents: 603
diff changeset
   576
for 1 more character to complete.
Chengsong
parents: 603
diff changeset
   577
$q_3$ is the last state, requiring 0 more character and is accepting.
Chengsong
parents: 603
diff changeset
   578
Depending on the suffix of the
Chengsong
parents: 603
diff changeset
   579
input string up to the current read location,
Chengsong
parents: 603
diff changeset
   580
the states $q_1$ and $q_2$, $q_3$
Chengsong
parents: 603
diff changeset
   581
may or may
Chengsong
parents: 603
diff changeset
   582
not be active, independent from each other.
Chengsong
parents: 603
diff changeset
   583
A $\mathit{DFA}$ for such an $\mathit{NFA}$ would
Chengsong
parents: 603
diff changeset
   584
contain at least $2^3$ non-equivalent states that cannot be merged, 
Chengsong
parents: 603
diff changeset
   585
because the subset construction during determinisation will generate
Chengsong
parents: 603
diff changeset
   586
all the elements in the power set $\mathit{Pow}\{q_1, q_2, q_3\}$.
Chengsong
parents: 603
diff changeset
   587
Generalizing this to regular expressions with larger
Chengsong
parents: 603
diff changeset
   588
bounded repetitions number, we have that
Chengsong
parents: 603
diff changeset
   589
regexes shaped like $r^*ar^{\{n\}}$ when converted to $\mathit{DFA}$s
605
Chengsong
parents: 604
diff changeset
   590
would require at least $2^{n+1}$ states, if $r$ itself contains
604
Chengsong
parents: 603
diff changeset
   591
more than 1 string.
Chengsong
parents: 603
diff changeset
   592
This is to represent all different 
605
Chengsong
parents: 604
diff changeset
   593
scenarios which "countdown" states are active.}
603
370fe1dde7c7 more restructuring chap1
Chengsong
parents: 602
diff changeset
   594
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   595
605
Chengsong
parents: 604
diff changeset
   596
Bounded repetitions are very important because they
612
Chengsong
parents: 609
diff changeset
   597
tend to occur a lot in practical use,
Chengsong
parents: 609
diff changeset
   598
for example in the regex library RegExLib,
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   599
the rules library of Snort \cite{Snort1999}\footnote{
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   600
Snort is a network intrusion detection (NID) tool
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   601
for monitoring network traffic.
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   602
The network security community curates a list
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   603
of malicious patterns written as regexes,
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   604
which is used by Snort's detection engine
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   605
to match against network traffic for any hostile
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   606
activities such as buffer overflow attacks.}, 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   607
as well as in XML Schema definitions (XSDs).
605
Chengsong
parents: 604
diff changeset
   608
According to Bj\"{o}rklund et al \cite{xml2015},
Chengsong
parents: 604
diff changeset
   609
more than half of the 
612
Chengsong
parents: 609
diff changeset
   610
XSDs they found on the Maven.org central repository
Chengsong
parents: 609
diff changeset
   611
have bounded regular expressions in them.
Chengsong
parents: 609
diff changeset
   612
Often the counters are quite large, with the largest being
Chengsong
parents: 609
diff changeset
   613
approximately up to ten million. 
605
Chengsong
parents: 604
diff changeset
   614
An example XSD they gave
612
Chengsong
parents: 609
diff changeset
   615
is:
Chengsong
parents: 609
diff changeset
   616
\begin{verbatim}
Chengsong
parents: 609
diff changeset
   617
<sequence minOccurs="0" maxOccurs="65535">
Chengsong
parents: 609
diff changeset
   618
 <element name="TimeIncr" type="mpeg7:MediaIncrDurationType"/>
Chengsong
parents: 609
diff changeset
   619
 <element name="MotionParams" type="float" minOccurs="2" maxOccurs="12"/>
Chengsong
parents: 609
diff changeset
   620
</sequence>
Chengsong
parents: 609
diff changeset
   621
\end{verbatim}
605
Chengsong
parents: 604
diff changeset
   622
This can be seen as the expression 
Chengsong
parents: 604
diff changeset
   623
$(ab^{2\ldots 12})^{0 \ldots 65535}$, where $a$ and $b$ are themselves
Chengsong
parents: 604
diff changeset
   624
regular expressions 
Chengsong
parents: 604
diff changeset
   625
satisfying certain constraints (such as 
Chengsong
parents: 604
diff changeset
   626
satisfying the floating point number format).
Chengsong
parents: 604
diff changeset
   627
It is therefore quite unsatisfying that 
Chengsong
parents: 604
diff changeset
   628
some regular expressions matching libraries
Chengsong
parents: 604
diff changeset
   629
impose adhoc limits
Chengsong
parents: 604
diff changeset
   630
for bounded regular expressions:
Chengsong
parents: 604
diff changeset
   631
For example, in the regular expression matching library in the Go
Chengsong
parents: 604
diff changeset
   632
language the regular expression $a^{1001}$ is not permitted, because no counter
Chengsong
parents: 604
diff changeset
   633
can be above 1000, and in the built-in Rust regular expression library
Chengsong
parents: 604
diff changeset
   634
expressions such as $a^{\{1000\}\{100\}\{5\}}$ give an error message
606
Chengsong
parents: 605
diff changeset
   635
for being too big. 
Chengsong
parents: 605
diff changeset
   636
As Becchi and Crawley\cite{Becchi08}  have pointed out,
Chengsong
parents: 605
diff changeset
   637
the reason for these restrictions
612
Chengsong
parents: 609
diff changeset
   638
is that they simulate a non-deterministic finite
606
Chengsong
parents: 605
diff changeset
   639
automata (NFA) with a breadth-first search.
Chengsong
parents: 605
diff changeset
   640
This way the number of active states could
Chengsong
parents: 605
diff changeset
   641
be equal to the counter number.
Chengsong
parents: 605
diff changeset
   642
When the counters are large, 
Chengsong
parents: 605
diff changeset
   643
the memory requirement could become
612
Chengsong
parents: 609
diff changeset
   644
infeasible, and a regex engine
Chengsong
parents: 609
diff changeset
   645
like Go will reject this pattern straight away.
606
Chengsong
parents: 605
diff changeset
   646
\begin{figure}[H]
Chengsong
parents: 605
diff changeset
   647
\begin{center}
Chengsong
parents: 605
diff changeset
   648
\begin{tikzpicture} [node distance = 2cm, on grid, auto]
Chengsong
parents: 605
diff changeset
   649
 
Chengsong
parents: 605
diff changeset
   650
    	\node (q0) [state, initial] {$0$};
Chengsong
parents: 605
diff changeset
   651
	\node (q1) [state, right = of q0] {$1$};
612
Chengsong
parents: 609
diff changeset
   652
	%\node (q2) [state, right = of q1] {$2$};
Chengsong
parents: 609
diff changeset
   653
	\node (qdots) [right = of q1] {$\ldots$};
606
Chengsong
parents: 605
diff changeset
   654
	\node (qn) [state, right = of qdots] {$n$};
Chengsong
parents: 605
diff changeset
   655
	\node (qn1) [state, right = of qn] {$n+1$};
Chengsong
parents: 605
diff changeset
   656
	\node (qn2) [state, right = of qn1] {$n+2$};
Chengsong
parents: 605
diff changeset
   657
	\node (qn3) [state, accepting, right = of qn2] {$n+3$}; 
Chengsong
parents: 605
diff changeset
   658
 
Chengsong
parents: 605
diff changeset
   659
\path [-stealth, thick]
Chengsong
parents: 605
diff changeset
   660
	(q0) edge [loop above] node {a} ()
Chengsong
parents: 605
diff changeset
   661
    (q0) edge node {a}   (q1) 
612
Chengsong
parents: 609
diff changeset
   662
    %(q1) edge node {.}   (q2)
Chengsong
parents: 609
diff changeset
   663
    (q1) edge node {.}   (qdots)
606
Chengsong
parents: 605
diff changeset
   664
    (qdots) edge node {.} (qn)
Chengsong
parents: 605
diff changeset
   665
    (qn) edge node {.} (qn1)
Chengsong
parents: 605
diff changeset
   666
    (qn1) edge node {b} (qn2)
Chengsong
parents: 605
diff changeset
   667
    (qn2) edge node {$c$} (qn3);
Chengsong
parents: 605
diff changeset
   668
\end{tikzpicture}
Chengsong
parents: 605
diff changeset
   669
%\begin{tikzpicture}[shorten >=1pt,node distance=2cm,on grid,auto] 
Chengsong
parents: 605
diff changeset
   670
%   \node[state,initial] (q_0)   {$0$}; 
Chengsong
parents: 605
diff changeset
   671
%   \node[state, ] (q_1) [right=of q_0] {$1$}; 
Chengsong
parents: 605
diff changeset
   672
%   \node[state, ] (q_2) [right=of q_1] {$2$}; 
Chengsong
parents: 605
diff changeset
   673
%   \node[state,
Chengsong
parents: 605
diff changeset
   674
%   \node[state, accepting, ](q_3) [right=of q_2] {$3$};
Chengsong
parents: 605
diff changeset
   675
%    \path[->] 
Chengsong
parents: 605
diff changeset
   676
%    (q_0) edge  node {a} (q_1)
Chengsong
parents: 605
diff changeset
   677
%    	  edge [loop below] node {a,b} ()
Chengsong
parents: 605
diff changeset
   678
%    (q_1) edge  node  {a,b} (q_2)
Chengsong
parents: 605
diff changeset
   679
%    (q_2) edge  node  {a,b} (q_3);
Chengsong
parents: 605
diff changeset
   680
%\end{tikzpicture}
Chengsong
parents: 605
diff changeset
   681
\end{center}
Chengsong
parents: 605
diff changeset
   682
\caption{The example given by Becchi and Crawley
Chengsong
parents: 605
diff changeset
   683
	that NFA simulation can consume large
Chengsong
parents: 605
diff changeset
   684
	amounts of memory: $.^*a.^{\{n\}}bc$ matching
Chengsong
parents: 605
diff changeset
   685
	strings of the form $aaa\ldots aaaabc$.
Chengsong
parents: 605
diff changeset
   686
	When traversing in a breadth-first manner,
Chengsong
parents: 605
diff changeset
   687
all states from 0 till $n+1$ will become active.}
Chengsong
parents: 605
diff changeset
   688
\end{figure}
Chengsong
parents: 605
diff changeset
   689
%Languages like $\mathit{Go}$ and $\mathit{Rust}$ use this
Chengsong
parents: 605
diff changeset
   690
%type of $\mathit{NFA}$ simulation and guarantees a linear runtime
Chengsong
parents: 605
diff changeset
   691
%in terms of input string length.
Chengsong
parents: 605
diff changeset
   692
%TODO:try out these lexers
Chengsong
parents: 605
diff changeset
   693
These problems can of course be solved in matching algorithms where 
605
Chengsong
parents: 604
diff changeset
   694
automata go beyond the classic notion and for instance include explicit
Chengsong
parents: 604
diff changeset
   695
counters \cite{Turo_ov__2020}.
612
Chengsong
parents: 609
diff changeset
   696
These solutions can be quite efficient,
606
Chengsong
parents: 605
diff changeset
   697
with the ability to process
612
Chengsong
parents: 609
diff changeset
   698
gigabytes of strings input per second
606
Chengsong
parents: 605
diff changeset
   699
even with large counters \cite{Becchi08}.
612
Chengsong
parents: 609
diff changeset
   700
But formal reasoning about these automata especially in Isabelle 
Chengsong
parents: 609
diff changeset
   701
can be challenging
Chengsong
parents: 609
diff changeset
   702
and un-intuitive. 
Chengsong
parents: 609
diff changeset
   703
Therefore, we take correctness and runtime claims made about these solutions
Chengsong
parents: 609
diff changeset
   704
with a grain of salt.
605
Chengsong
parents: 604
diff changeset
   705
Chengsong
parents: 604
diff changeset
   706
In the work reported in \cite{CSL2022} and here, 
Chengsong
parents: 604
diff changeset
   707
we add better support using derivatives
Chengsong
parents: 604
diff changeset
   708
for bounded regular expressions $r^{\{n\}}$.
Chengsong
parents: 604
diff changeset
   709
The results
Chengsong
parents: 604
diff changeset
   710
extend straightforwardly to
Chengsong
parents: 604
diff changeset
   711
repetitions with an interval such as 
Chengsong
parents: 604
diff changeset
   712
$r^{\{n\ldots m\}}$.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   713
The merit of Brzozowski derivatives (more on this later)
605
Chengsong
parents: 604
diff changeset
   714
on this problem is that
Chengsong
parents: 604
diff changeset
   715
it can be naturally extended to support bounded repetitions.
Chengsong
parents: 604
diff changeset
   716
Moreover these extensions are still made up of only
Chengsong
parents: 604
diff changeset
   717
inductive datatypes and recursive functions,
Chengsong
parents: 604
diff changeset
   718
making it handy to deal with using theorem provers.
Chengsong
parents: 604
diff changeset
   719
%The point here is that Brzozowski derivatives and the algorithms by Sulzmann and Lu can be
Chengsong
parents: 604
diff changeset
   720
%straightforwardly extended to deal with bounded regular expressions
Chengsong
parents: 604
diff changeset
   721
%and moreover the resulting code still consists of only simple
Chengsong
parents: 604
diff changeset
   722
%recursive functions and inductive datatypes.
Chengsong
parents: 604
diff changeset
   723
Finally, bounded regular expressions do not destroy our finite
Chengsong
parents: 604
diff changeset
   724
boundedness property, which we shall prove later on.
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   725
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   726
606
Chengsong
parents: 605
diff changeset
   727
Chengsong
parents: 605
diff changeset
   728
Chengsong
parents: 605
diff changeset
   729
605
Chengsong
parents: 604
diff changeset
   730
\subsection{Back-References}
606
Chengsong
parents: 605
diff changeset
   731
The other way to simulate an $\mathit{NFA}$ for matching is choosing  
Chengsong
parents: 605
diff changeset
   732
a single transition each time, keeping all the other options in 
Chengsong
parents: 605
diff changeset
   733
a queue or stack, and backtracking if that choice eventually 
Chengsong
parents: 605
diff changeset
   734
fails. This method, often called a  "depth-first-search", 
Chengsong
parents: 605
diff changeset
   735
is efficient in a lot of cases, but could end up
Chengsong
parents: 605
diff changeset
   736
with exponential run time.
Chengsong
parents: 605
diff changeset
   737
The backtracking method is employed in regex libraries
Chengsong
parents: 605
diff changeset
   738
that support \emph{back-references}, for example
Chengsong
parents: 605
diff changeset
   739
in Java and Python.
605
Chengsong
parents: 604
diff changeset
   740
%\section{Back-references and The Terminology Regex}
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   741
605
Chengsong
parents: 604
diff changeset
   742
%When one constructs an $\NFA$ out of a regular expression
Chengsong
parents: 604
diff changeset
   743
%there is often very little to be done in the first phase, one simply 
Chengsong
parents: 604
diff changeset
   744
%construct the $\NFA$ states based on the structure of the input regular expression.
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   745
605
Chengsong
parents: 604
diff changeset
   746
%In the lexing phase, one can simulate the $\mathit{NFA}$ running in two ways:
Chengsong
parents: 604
diff changeset
   747
%one by keeping track of all active states after consuming 
Chengsong
parents: 604
diff changeset
   748
%a character, and update that set of states iteratively.
Chengsong
parents: 604
diff changeset
   749
%This can be viewed as a breadth-first-search of the $\mathit{NFA}$
Chengsong
parents: 604
diff changeset
   750
%for a path terminating
Chengsong
parents: 604
diff changeset
   751
%at an accepting state.
606
Chengsong
parents: 605
diff changeset
   752
Chengsong
parents: 605
diff changeset
   753
Chengsong
parents: 605
diff changeset
   754
Chengsong
parents: 605
diff changeset
   755
Given a regular expression like this (the sequence
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   756
operator is omitted for brevity):
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   757
\begin{center}
606
Chengsong
parents: 605
diff changeset
   758
	$r_1r_2r_3r_4$
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   759
\end{center}
606
Chengsong
parents: 605
diff changeset
   760
one could label sub-expressions of interest 
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   761
by parenthesizing them and giving 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   762
them a number by the order in which their opening parentheses appear.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   763
One possible way of parenthesizing and labelling is given below:
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   764
\begin{center}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   765
	$\underset{1}{(}r_1\underset{2}{(}r_2\underset{3}{(}r_3)\underset{4}{(}r_4)))$
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   766
\end{center}
606
Chengsong
parents: 605
diff changeset
   767
The sub-expressions
Chengsong
parents: 605
diff changeset
   768
$r_1r_2r_3r_4$, $r_1r_2r_3$, $r_3$ and $r_4$ are labelled
Chengsong
parents: 605
diff changeset
   769
by 1 to 4, and can be ``referred back'' by their respective numbers. 
Chengsong
parents: 605
diff changeset
   770
%These sub-expressions are called "capturing groups".
Chengsong
parents: 605
diff changeset
   771
To do so, we use the syntax $\backslash i$ 
Chengsong
parents: 605
diff changeset
   772
to denote that we want the sub-string 
Chengsong
parents: 605
diff changeset
   773
of the input just matched by the i-th
Chengsong
parents: 605
diff changeset
   774
sub-expression to appear again, 
Chengsong
parents: 605
diff changeset
   775
exactly the same as it first appeared: 
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   776
\begin{center}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   777
$\ldots\underset{\text{i-th lparen}}{(}{r_i})\ldots 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   778
\underset{s_i \text{ which just matched} \;r_i}{\backslash i}$
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   779
\end{center}
606
Chengsong
parents: 605
diff changeset
   780
%The backslash and number $i$ are the
Chengsong
parents: 605
diff changeset
   781
%so-called "back-references".
Chengsong
parents: 605
diff changeset
   782
%Let $e$ be an expression made of regular expressions 
Chengsong
parents: 605
diff changeset
   783
%and back-references. $e$ contains the expression $e_i$
Chengsong
parents: 605
diff changeset
   784
%as its $i$-th capturing group.
Chengsong
parents: 605
diff changeset
   785
%The semantics of back-reference can be recursively
Chengsong
parents: 605
diff changeset
   786
%written as:
Chengsong
parents: 605
diff changeset
   787
%\begin{center}
Chengsong
parents: 605
diff changeset
   788
%	\begin{tabular}{c}
Chengsong
parents: 605
diff changeset
   789
%		$L ( e \cdot \backslash i) = \{s @ s_i \mid s \in L (e)\quad s_i \in L(r_i)$\\
Chengsong
parents: 605
diff changeset
   790
%		$s_i\; \text{match of ($e$, $s$)'s $i$-th capturing group string}\}$
Chengsong
parents: 605
diff changeset
   791
%	\end{tabular}
Chengsong
parents: 605
diff changeset
   792
%\end{center}
Chengsong
parents: 605
diff changeset
   793
A concrete example
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   794
for back-references is
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   795
\begin{center}
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   796
$(.^*)\backslash 1$,
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   797
\end{center}
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   798
which matches
606
Chengsong
parents: 605
diff changeset
   799
strings that can be split into two identical halves,
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   800
for example $\mathit{foofoo}$, $\mathit{ww}$ and so on.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   801
Note that this is different from 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   802
repeating the  sub-expression verbatim like
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   803
\begin{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   804
	$(.^*)(.^*)$,
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   805
\end{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   806
which does not impose any restrictions on what strings the second 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   807
sub-expression $.^*$
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   808
might match.
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   809
Another example of back-references is
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   810
\begin{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   811
$(.)(.)\backslash 2\backslash 1$
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   812
\end{center}
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   813
which matches four-character palindromes
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   814
like $abba$, $x??x$ and so on.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   815
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   816
Back-references is a regex construct 
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   817
that programmers find quite useful.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   818
According to Becchi and Crawley\cite{Becchi08},
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   819
6\% of Snort rules (up until 2008) use them.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   820
The most common use of back-references
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   821
is to express well-formed html files,
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   822
where back-references are convenient for matching
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   823
opening and closing tags like 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   824
\begin{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   825
	$\langle html \rangle \ldots \langle / html \rangle$
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   826
\end{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   827
A regex describing such a format
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   828
is
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   829
\begin{center}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   830
	$\langle (.^+) \rangle \ldots \langle / \backslash 1 \rangle$
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   831
\end{center}
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   832
Despite being useful, the expressive power of regexes 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   833
go beyond the regular language hierarchy
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   834
once back-references are included.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   835
In fact, they allow the regex construct to express 
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   836
languages that cannot be contained in context-free
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   837
languages either.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   838
For example, the back-reference $(a^*)b\backslash1 b \backslash 1$
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   839
expresses the language $\{a^n b a^n b a^n\mid n \in \mathbb{N}\}$,
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   840
which cannot be expressed by context-free grammars\parencite{campeanu2003formal}.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   841
Such a language is contained in the context-sensitive hierarchy
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   842
of formal languages. 
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   843
Also solving the matching problem involving back-references
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   844
is known to be NP-complete \parencite{alfred2014algorithms}.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   845
Regex libraries supporting back-references such as 
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   846
PCRE \cite{pcre} therefore have to
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   847
revert to a depth-first search algorithm which backtracks.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   848
What is unexpected is that even in the cases 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   849
not involving back-references, there is still
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   850
a (non-negligible) chance they might backtrack super-linearly,
618
233cf2b97d1a chapter 5 finished!!
Chengsong
parents: 612
diff changeset
   851
as shown in the graphs in figure\ref{fig:aStarStarb}.
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
   852
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   853
Summing these up, we can categorise existing 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   854
practical regex libraries into two kinds:
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   855
(i) The ones  with  linear
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   856
time guarantees like Go and Rust. The downside with them is that
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   857
they impose restrictions
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   858
on the regular expressions (not allowing back-references, 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   859
bounded repetitions cannot exceed an ad hoc limit etc.).
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   860
(ii) Those 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   861
that allow large bounded regular expressions and back-references
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   862
at the expense of using backtracking algorithms.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   863
They can potentially ``grind to a halt''
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   864
on some very simple cases, resulting 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   865
ReDoS attacks.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   866
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   867
The proble with both approaches is the motivation for us 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   868
to look again at the regular expression matching problem. 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   869
Another motivation is that regular expression matching algorithms
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   870
that follow the POSIX standard often contain errors and bugs 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   871
as we shall explain next.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   872
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   873
%We would like to have regex engines that can 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   874
%deal with the regular part (e.g.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   875
%bounded repetitions) of regexes more
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   876
%efficiently.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   877
%Also we want to make sure that they do it correctly.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   878
%It turns out that such aim is not so easy to achieve.
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   879
 %TODO: give examples such as RE2 GOLANG 1000 restriction, rust no repetitions 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   880
% For example, the Rust regex engine claims to be linear, 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   881
% but does not support lookarounds and back-references.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   882
% The GoLang regex library does not support over 1000 repetitions.  
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   883
% Java and Python both support back-references, but shows
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   884
%catastrophic backtracking behaviours on inputs without back-references(
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   885
%when the language is still regular).
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   886
 %TODO: test performance of Rust on (((((a*a*)b*)b){20})*)c  baabaabababaabaaaaaaaaababaaaababababaaaabaaabaaaaaabaabaabababaababaaaaaaaaababaaaababababaaaaaaaaaaaaac
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   887
 %TODO: verify the fact Rust does not allow 1000+ reps
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   888
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
   889
605
Chengsong
parents: 604
diff changeset
   890
Chengsong
parents: 604
diff changeset
   891
Chengsong
parents: 604
diff changeset
   892
%The time cost of regex matching algorithms in general
Chengsong
parents: 604
diff changeset
   893
%involve two different phases, and different things can go differently wrong on 
Chengsong
parents: 604
diff changeset
   894
%these phases.
Chengsong
parents: 604
diff changeset
   895
%$\DFA$s usually have problems in the first (construction) phase
Chengsong
parents: 604
diff changeset
   896
%, whereas $\NFA$s usually run into trouble
Chengsong
parents: 604
diff changeset
   897
%on the second phase.
Chengsong
parents: 604
diff changeset
   898
Chengsong
parents: 604
diff changeset
   899
Chengsong
parents: 604
diff changeset
   900
\section{Error-prone POSIX Implementations}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   901
Very often there are multiple ways of matching a string
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   902
with a regular expression.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   903
In such cases the regular expressions matcher needs to
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   904
disambiguate.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   905
The more widely used strategy is called POSIX,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   906
which roughly speaking always chooses the longest initial match.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   907
The POSIX strategy is widely adopted in many regular expression matchers.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   908
However, many implementations (including the C libraries
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   909
used by Linux and OS X distributions) contain bugs
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   910
or do not meet the specification they claim to adhere to.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   911
Kuklewicz maintains a unit test repository which lists some
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   912
problems with existing regular expression engines \ref{KuklewiczHaskell}.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   913
In some cases, they either fail to generate a
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   914
result when there exists a match,
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   915
or give results that are inconsistent with the POSIX standard.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   916
A concrete example is the regex:
605
Chengsong
parents: 604
diff changeset
   917
\begin{center}
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   918
	$(aba + ab + a)^* \text{and the string} ababa$
605
Chengsong
parents: 604
diff changeset
   919
\end{center}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   920
The correct POSIX match for the above
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   921
is the entire string $ababa$, 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   922
split into two Kleene star iterations, namely $[ab], [aba]$ at positions
605
Chengsong
parents: 604
diff changeset
   923
$[0, 2), [2, 5)$
Chengsong
parents: 604
diff changeset
   924
respectively.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   925
But trying this out in regex101 \parencite{regex101} \footnote{
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   926
	regex101 is an online regular expression matcher which
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   927
	provides API for trying out regular expression
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   928
	engines of multiple popular programming languages like
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   929
Java, Python, Go, etc.}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   930
with different engines yields
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   931
always matches: $[aba]$ at $[0, 3)$
605
Chengsong
parents: 604
diff changeset
   932
and $a$ at $[4, 5)$.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   933
Fowler \cite{fowler2003} and Kuklewicz \cite{KuklewiczHaskell} 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   934
commented that most regex libraries are not
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   935
correctly implementing the central POSIX
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   936
rule, called the maximum munch rule.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   937
Grathwohl \parencite{grathwohl2014crash} wrote,
605
Chengsong
parents: 604
diff changeset
   938
\begin{quote}
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   939
	``The POSIX strategy is more complicated than the 
605
Chengsong
parents: 604
diff changeset
   940
	greedy because of the dependence on information about 
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   941
	the length of matched strings in the various subexpressions.''
605
Chengsong
parents: 604
diff changeset
   942
\end{quote}
Chengsong
parents: 604
diff changeset
   943
%\noindent
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   944
We think the implementation complexity of POSIX rules also come from
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   945
the specification being not very precise.
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   946
There are many informal summaries of this disambiguation
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   947
strategy, which are often quite long and delicate.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   948
For example Kuklewicz \cite{KuklewiczHaskell} 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   949
described the POSIX rule as (section 1, last paragraph):
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   950
\begin{quote}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   951
	\begin{itemize}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   952
		\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   953
regular expressions (REs) take the leftmost starting match, and the longest match starting there
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   954
earlier subpatterns have leftmost-longest priority over later subpatterns\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   955
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   956
higher-level subpatterns have leftmost-longest priority over their component subpatterns\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   957
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   958
REs have right associative concatenation which can be changed with parenthesis\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   959
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   960
parenthesized subexpressions return the match from their last usage\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   961
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   962
text of component subexpressions must be contained in the text of the 
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   963
higher-level subexpressions\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   964
\item
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   965
if "p" and "q" can never match the same text then "p|q" and "q|p" are equivalent, up to trivial renumbering of captured subexpressions\\
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   966
\item
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   967
if "p" in "p*" is used to capture non-empty text then additional repetitions of "p" will not capture an empty string\\
607
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   968
\end{itemize}
e6fc9b72c0e3 chap1 almost done
Chengsong
parents: 606
diff changeset
   969
\end{quote}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   970
%The text above 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   971
%is trying to capture something very precise,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   972
%and is crying out for formalising.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   973
Ausaf et al. \cite{AusafDyckhoffUrban2016}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   974
are the first to
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   975
give a quite simple formalised POSIX
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   976
specification in Isabelle/HOL, and also prove 
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   977
that their specification coincides with the 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   978
POSIX specification given by Okui and Suzuki \cite{Okui10}.
608
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   979
They then formally proved the correctness of
37b6fd310a16 added related work chap
Chengsong
parents: 607
diff changeset
   980
a lexing algorithm by Sulzmann and Lu \cite{Sulzmann2014}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   981
with regards to that specification.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   982
They also found that the informal POSIX
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   983
specification by Sulzmann and Lu does not work for the correctness proof.
605
Chengsong
parents: 604
diff changeset
   984
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   985
In the next section we will briefly
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   986
introduce Brzozowski derivatives and Sulzmann
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   987
and Lu's algorithm, which the main point of this thesis builds on.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   988
%We give a taste of what they 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   989
%are like and why they are suitable for regular expression
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   990
%matching and lexing.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   991
\section{Formal Specification of POSIX Matching 
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   992
and Brzozowski Derivatives}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   993
%Now we start with the central topic of the thesis: Brzozowski derivatives.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   994
Brzozowski \cite{Brzozowski1964} first introduced the 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   995
concept of a \emph{derivative} of regular expression in 1964.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
   996
The derivative of a regular expression $r$
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   997
with respect to a character $c$, is written as $r \backslash c$.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   998
This operation tells us what $r$ transforms into
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
   999
if we ``chop'' off the first character $c$ 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1000
from all strings in the language of $r$ (defined
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1001
later as $L \; r$).
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1002
%To give a flavour of Brzozowski derivatives, we present
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1003
%two straightforward clauses from it:
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1004
%\begin{center}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1005
%	\begin{tabular}{lcl}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1006
%		$d \backslash c$     & $\dn$ & 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1007
%		$\mathit{if} \;c = d\;\mathit{then}\;\ONE\;\mathit{else}\;\ZERO$\\
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1008
%$(r_1 + r_2)\backslash c$     & $\dn$ & $r_1 \backslash c \,+\, r_2 \backslash c$\\
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1009
%	\end{tabular}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1010
%\end{center}
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1011
%\noindent
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1012
%The first clause says that for the regular expression
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1013
%denoting a singleton set consisting of a sinlge-character string $\{ d \}$,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1014
%we check the derivative character $c$ against $d$,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1015
%returning a set containing only the empty string $\{ [] \}$
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1016
%if $c$ and $d$ are equal, and the empty set $\varnothing$ otherwise.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1017
%The second clause states that to obtain the regular expression
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1018
%representing all strings' head character $c$ being chopped off
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1019
%from $r_1 + r_2$, one simply needs to recursively take derivative
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1020
%of $r_1$ and $r_2$ and then put them together.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1021
Derivatives have the property
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1022
that $s \in L \; (r\backslash c)$ if and only if 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1023
$c::s \in L \; r$ where $::$ stands for list prepending.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1024
%This property can be used on regular expressions
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1025
%matching and lexing--to test whether a string $s$ is in $L \; r$,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1026
%one simply takes derivatives of $r$ successively with
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1027
%respect to the characters (in the correct order) in $s$,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1028
%and then test whether the empty string is in the last regular expression.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1029
With this derivatives give a simple solution
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1030
to the problem of matching a string $s$ with a regular
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1031
expression $r$: if the derivative of $r$ w.r.t.\ (in
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1032
succession) all the characters of the string matches the empty string,
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1033
then $r$ matches $s$ (and {\em vice versa}).  
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1034
%This makes formally reasoning about these properties such
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1035
%as correctness and complexity smooth and intuitive.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1036
There had been several mechanised proofs about this property in various theorem
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1037
provers,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1038
for example one by Owens and Slind \cite{Owens2008} in HOL4,
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1039
another one by Krauss and Nipkow \cite{Nipkow98} in Isabelle/HOL, and
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1040
yet another in Coq by Coquand and Siles \cite{Coquand2012}.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1041
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1042
In addition, one can extend derivatives to bounded repetitions
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1043
relatively straightforwardly. For example, the derivative for 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1044
this can be defined as:
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1045
\begin{center}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1046
	\begin{tabular}{lcl}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1047
		$r^{\{n\}} \backslash c$     & $\dn$ & $r \backslash c \cdot
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1048
		r^{\{n-1\}}$\\
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1049
	\end{tabular}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1050
\end{center}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1051
\noindent
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1052
Experimental results suggest that  unlike DFA-based solutions
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1053
for bounded regular expressions,
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1054
derivatives can cope
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1055
large counters
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1056
quite well.
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1057
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1058
There has also been 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1059
extensions to other constructs.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1060
For example, Owens et al include the derivatives
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1061
for the \emph{NOT} regular expression, which is
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1062
able to concisely express C-style comments of the form
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1063
$/* \ldots */$ (see \cite{Owens2008}).
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1064
Another extension for derivatives is
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1065
regular expressions with look-aheads, done
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1066
by Miyazaki and Minamide
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1067
\cite{Takayuki2019}.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1068
%We therefore use Brzozowski derivatives on regular expressions 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1069
%lexing 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1070
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1071
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1072
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1073
Given the above definitions and properties of
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1074
Brzozowski derivatives, one quickly realises their potential
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1075
in generating a formally verified algorithm for lexing--the clauses and property
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1076
can be easily expressed in a functional programming language 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1077
or converted to theorem prover
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1078
code, with great extensibility.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1079
Perhaps this is the reason why it has sparked quite a bit of interest
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1080
in the functional programming and theorem prover communities in the last
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1081
fifteen or so years (
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1082
\cite{Almeidaetal10}, \cite{Berglund14}, \cite{Berglund18},
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1083
\cite{Chen12} and \cite{Coquand2012}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1084
to name a few), despite being buried in the ``sands of time'' \cite{Owens2008}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1085
after they were first published by Brzozowski.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1086
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1087
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1088
However, there are two difficulties with derivative-based matchers:
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1089
First, Brzozowski's original matcher only generates a yes/no answer
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1090
for whether a regular expression matches a string or not.  This is too
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1091
little information in the context of lexing where separate tokens must
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1092
be identified and also classified (for example as keywords
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1093
or identifiers). 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1094
Second, derivative-based matchers need to be more efficient.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1095
Elegant and beautiful
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1096
as many implementations are,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1097
they can be excruciatingly slow. 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1098
For example, Sulzmann and Lu
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1099
claim a linear running time of their proposed algorithm,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1100
but that was falsified by our experiments. The running time 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1101
is actually $\Omega(2^n)$ in the worst case.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1102
A similar claim about a theoretical runtime of $O(n^2)$ 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1103
is made for the Verbatim \cite{Verbatim}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1104
%TODO: give references
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1105
lexer, which calculates POSIX matches and is based on derivatives.
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1106
They formalized the correctness of the lexer, but not their complexity result.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1107
In the performance evaluation section, they analyzed the run time
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1108
of matching $a$ with the string 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1109
\begin{center}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1110
	$\underbrace{a \ldots a}_{\text{n a's}}$.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1111
\end{center}
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1112
\noindent
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1113
They concluded that the algorithm is quadratic in terms of 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1114
the length of the input string.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1115
When we tried out their extracted OCaml code with our example $(a+aa)^*$,
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1116
the time it took to match a string of 40 $a$'s was approximately 5 minutes.
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1117
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1118
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1119
\subsection{Sulzmann and Lu's Algorithm}
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1120
Sulzmann and Lu~\cite{Sulzmann2014} overcame the first 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1121
problem with the yes/no answer 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1122
by cleverly extending Brzozowski's matching
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1123
algorithm. Their extended version generates additional information on
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1124
\emph{how} a regular expression matches a string following the POSIX
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1125
rules for regular expression matching. They achieve this by adding a
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1126
second ``phase'' to Brzozowski's algorithm involving an injection
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1127
function.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1128
In earlier work, Ausaf et al provided the formal
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1129
specification of what POSIX matching means and proved in Isabelle/HOL
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1130
the correctness
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1131
of this extended algorithm accordingly
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1132
\cite{AusafDyckhoffUrban2016}.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1133
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1134
The version of the algorithm proven correct 
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1135
suffers heavily from a 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1136
second difficulty, where the internal derivatives can
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1137
grow to arbitrarily big sizes. 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1138
For example if we start with the
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1139
regular expression $(a+aa)^*$ and take
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1140
successive derivatives according to the character $a$, we end up with
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1141
a sequence of ever-growing derivatives like 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1142
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1143
\def\ll{\stackrel{\_\backslash{} a}{\longrightarrow}}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1144
\begin{center}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1145
\begin{tabular}{rll}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1146
$(a + aa)^*$ & $\ll$ & $(\ONE + \ONE{}a) \cdot (a + aa)^*$\\
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1147
& $\ll$ & $(\ZERO + \ZERO{}a + \ONE) \cdot (a + aa)^* \;+\; (\ONE + \ONE{}a) \cdot (a + aa)^*$\\
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1148
& $\ll$ & $(\ZERO + \ZERO{}a + \ZERO) \cdot (a + aa)^* + (\ONE + \ONE{}a) \cdot (a + aa)^* \;+\; $\\
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1149
& & $\qquad(\ZERO + \ZERO{}a + \ONE) \cdot (a + aa)^* + (\ONE + \ONE{}a) \cdot (a + aa)^*$\\
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1150
& $\ll$ & \ldots \hspace{15mm}(regular expressions of sizes 98, 169, 283, 468, 767, \ldots)
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1151
\end{tabular}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1152
\end{center}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1153
 
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1154
\noindent where after around 35 steps we run out of memory on a
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1155
typical computer.  Clearly, the
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1156
notation involving $\ZERO$s and $\ONE$s already suggests
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1157
simplification rules that can be applied to regular regular
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1158
expressions, for example $\ZERO{}\,r \Rightarrow \ZERO$, $\ONE{}\,r
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1159
\Rightarrow r$, $\ZERO{} + r \Rightarrow r$ and $r + r \Rightarrow
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1160
r$. While such simple-minded simplifications have been proved in 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1161
the work by Ausaf et al. to preserve the correctness of Sulzmann and Lu's
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1162
algorithm \cite{AusafDyckhoffUrban2016}, they unfortunately do
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1163
\emph{not} help with limiting the growth of the derivatives shown
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1164
above: the growth is slowed, but the derivatives can still grow rather
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1165
quickly beyond any finite bound.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1166
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1167
Therefore we want to look in this thesis at a second
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1168
algorithm by Sulzmann and Lu where they
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1169
overcame this ``growth problem'' \cite{Sulzmann2014}.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1170
In this version, POSIX values are 
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1171
represented as bit sequences and such sequences are incrementally generated
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1172
when derivatives are calculated. The compact representation
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1173
of bit sequences and regular expressions allows them to define a more
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1174
``aggressive'' simplification method that keeps the size of the
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1175
derivatives finite no matter what the length of the string is.
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1176
They make some informal claims about the correctness and linear behaviour
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1177
of this version, but do not provide any supporting proof arguments, not
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1178
even ``pencil-and-paper'' arguments. They write about their bit-coded
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1179
\emph{incremental parsing method} (that is the algorithm to be formalised
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1180
in this dissertation)
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1181
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1182
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1183
  
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1184
  \begin{quote}\it
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1185
  ``Correctness Claim: We further claim that the incremental parsing
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1186
  method [..] in combination with the simplification steps [..]
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1187
  yields POSIX parse trees. We have tested this claim
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1188
  extensively [..] but yet
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1189
  have to work out all proof details.'' \cite[Page 14]{Sulzmann2014}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1190
\end{quote}  
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1191
Ausaf and Urban made some initial progress towards the 
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1192
full correctness proof but still had to leave out the optimisation
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1193
Sulzmann and Lu proposed.
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1194
Ausaf  wrote \cite{Ausaf},
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1195
  \begin{quote}\it
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1196
``The next step would be to implement a more aggressive simplification procedure on annotated regular expressions and then prove the corresponding algorithm generates the same values as blexer. Alas due to time constraints we are unable to do so here.''
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1197
\end{quote}  
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1198
This thesis implements the aggressive simplifications envisioned
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1199
by Ausaf and Urban,
622
4b1149fb5aec incorporated more comments, bib
Chengsong
parents: 620
diff changeset
  1200
together with a formal proof of the correctness of those simplifications.
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1201
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1202
612
Chengsong
parents: 609
diff changeset
  1203
One of the most recent work in the context of lexing
Chengsong
parents: 609
diff changeset
  1204
%with this issue
Chengsong
parents: 609
diff changeset
  1205
is the Verbatim lexer by Egolf, Lasser and Fisher\cite{Verbatim}.
Chengsong
parents: 609
diff changeset
  1206
This is relevant work for us and we will compare it later with 
Chengsong
parents: 609
diff changeset
  1207
our derivative-based matcher we are going to present.
Chengsong
parents: 609
diff changeset
  1208
There is also some newer work called
Chengsong
parents: 609
diff changeset
  1209
Verbatim++\cite{Verbatimpp}, which does not use derivatives, 
Chengsong
parents: 609
diff changeset
  1210
but deterministic finite automaton instead.
Chengsong
parents: 609
diff changeset
  1211
%An example that gives problem to automaton approaches would be
Chengsong
parents: 609
diff changeset
  1212
%the regular expression $(a|b)^*a(a|b)^{\{n\}}$.
Chengsong
parents: 609
diff changeset
  1213
%It requires at least $2^{n+1}$ states to represent
Chengsong
parents: 609
diff changeset
  1214
%as a DFA.
Chengsong
parents: 609
diff changeset
  1215
Chengsong
parents: 609
diff changeset
  1216
532
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1217
%----------------------------------------------------------------------------------------
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1218
\section{Contribution}
cc54ce075db5 restructured
Chengsong
parents:
diff changeset
  1219
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1220
In this thesis,
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1221
we propose a solution to catastrophic
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1222
backtracking and error-prone matchers: a formally verified
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1223
regular expression lexing algorithm
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1224
that is both fast
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1225
and correct by extending Ausaf et al.'s work.
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1226
The end result is %a regular expression lexing algorithm that comes with 
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1227
\begin{itemize}
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1228
\item
609
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1229
an improved version of  Sulzmann and Lu's bit-coded algorithm using 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1230
derivatives with simplifications, 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1231
accompanied by
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1232
a proven correctness theorem according to POSIX specification 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1233
given by Ausaf et al. \cite{AusafDyckhoffUrban2016}, 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1234
\item 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1235
a complexity-related property for that algorithm saying that the 
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1236
internal data structure will
61139fdddae0 chap1 totally done
Chengsong
parents: 608
diff changeset
  1237
remain finite,
538
8016a2480704 intro and chap2
Chengsong
parents: 537
diff changeset
  1238
\item
609
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parents: 608
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  1239
and extension to
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diff changeset
  1240
the bounded repetitions construct with the correctness and finiteness property
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diff changeset
  1241
maintained.
622
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  1242
\end{itemize}
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  1243
\noindent
609
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  1244
With a formal finiteness bound in place,
61139fdddae0 chap1 totally done
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diff changeset
  1245
we can greatly reduce the attack surface of servers in terms of ReDoS attacks.
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  1246
Further improvements to the algorithm with an even stronger version of 
622
4b1149fb5aec incorporated more comments, bib
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parents: 620
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  1247
simplification can be made.
609
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diff changeset
  1248
538
8016a2480704 intro and chap2
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diff changeset
  1249
8016a2480704 intro and chap2
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parents: 537
diff changeset
  1250
532
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  1251
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  1252
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  1253
\section{Structure of the thesis}
622
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  1254
In chapter \ref{Inj} we will introduce the concepts
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  1255
and notations we 
622
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  1256
use for describing regular expressions and derivatives,
4b1149fb5aec incorporated more comments, bib
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  1257
and the first version of their lexing algorithm without bitcodes (including 
4b1149fb5aec incorporated more comments, bib
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  1258
its correctness proof).
4b1149fb5aec incorporated more comments, bib
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  1259
We will give their second lexing algorithm with bitcodes in \ref{Bitcoded1}
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  1260
together with the correctness proof by Ausaf and Urban.
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  1261
Then we illustrate in chapter \ref{Bitcoded2}
4b1149fb5aec incorporated more comments, bib
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  1262
how Sulzmann and Lu's
4b1149fb5aec incorporated more comments, bib
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  1263
simplifications fail to simplify. We therefore introduce our version of the
4b1149fb5aec incorporated more comments, bib
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  1264
algorithm with simplification and 
532
cc54ce075db5 restructured
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  1265
its correctness proof .  
622
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  1266
In chapter \ref{Finite} we give the second guarantee
532
cc54ce075db5 restructured
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  1267
of our bitcoded algorithm, that is a finite bound on the size of any 
622
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diff changeset
  1268
regular expression's derivatives.
4b1149fb5aec incorporated more comments, bib
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  1269
In chapter \ref{Cubic} we discuss stronger simplification rules which 
4b1149fb5aec incorporated more comments, bib
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  1270
improve the finite bound to a polynomial bound, and also show how one can extend the
4b1149fb5aec incorporated more comments, bib
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  1271
algorithm to include bounded repetitions. %and the NOT regular expression.
532
cc54ce075db5 restructured
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  1272
 
cc54ce075db5 restructured
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  1273
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  1274
cc54ce075db5 restructured
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  1275
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  1276
cc54ce075db5 restructured
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  1277
%----------------------------------------------------------------------------------------
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  1278
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  1279
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  1280
%----------------------------------------------------------------------------------------
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  1281
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  1282
%----------------------------------------------------------------------------------------
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  1283
cc54ce075db5 restructured
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  1284
%----------------------------------------------------------------------------------------
cc54ce075db5 restructured
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  1285
cc54ce075db5 restructured
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  1286