Binary file PhdThesisRealOne/.DS_Store has changed
Binary file PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/.DS_Store has changed
Binary file PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Appendices/.DS_Store has changed
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Appendices/AppendixA.aux Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,150 +0,0 @@
-\relax
-\providecommand\hyper@newdestlabel[2]{}
-\@writefile{toc}{\contentsline {chapter}{\numberline {A}Frequently Asked Questions}{27}{appendix.62}}
-\@writefile{lof}{\addvspace {10\p@ }}
-\@writefile{lot}{\addvspace {10\p@ }}
-\newlabel{AppendixA}{{A}{27}{Frequently Asked Questions}{appendix.62}{}}
-\@writefile{toc}{\contentsline {section}{\numberline {A.1}How do I change the colors of links?}{27}{section.63}}
-\@setckpt{Appendices/AppendixA}{
-\setcounter{page}{28}
-\setcounter{equation}{0}
-\setcounter{enumi}{0}
-\setcounter{enumii}{0}
-\setcounter{enumiii}{0}
-\setcounter{enumiv}{0}
-\setcounter{footnote}{0}
-\setcounter{mpfootnote}{0}
-\setcounter{part}{0}
-\setcounter{chapter}{1}
-\setcounter{section}{1}
-\setcounter{subsection}{0}
-\setcounter{subsubsection}{0}
-\setcounter{paragraph}{0}
-\setcounter{subparagraph}{0}
-\setcounter{figure}{0}
-\setcounter{table}{0}
-\setcounter{LT@tables}{3}
-\setcounter{LT@chunks}{1}
-\setcounter{ContinuedFloat}{0}
-\setcounter{Item}{0}
-\setcounter{Hfootnote}{1}
-\setcounter{bookmark@seq@number}{42}
-\setcounter{tabx@nest}{0}
-\setcounter{listtotal}{0}
-\setcounter{listcount}{0}
-\setcounter{liststart}{0}
-\setcounter{liststop}{0}
-\setcounter{citecount}{0}
-\setcounter{citetotal}{0}
-\setcounter{multicitecount}{0}
-\setcounter{multicitetotal}{0}
-\setcounter{instcount}{6}
-\setcounter{maxnames}{3}
-\setcounter{minnames}{1}
-\setcounter{maxitems}{3}
-\setcounter{minitems}{1}
-\setcounter{citecounter}{0}
-\setcounter{savedcitecounter}{0}
-\setcounter{uniquelist}{0}
-\setcounter{uniquename}{0}
-\setcounter{refsection}{0}
-\setcounter{refsegment}{0}
-\setcounter{maxextratitle}{0}
-\setcounter{maxextratitleyear}{0}
-\setcounter{maxextradate}{0}
-\setcounter{maxextraalpha}{0}
-\setcounter{abbrvpenalty}{50}
-\setcounter{highnamepenalty}{50}
-\setcounter{lownamepenalty}{25}
-\setcounter{maxparens}{3}
-\setcounter{parenlevel}{0}
-\setcounter{mincomprange}{10}
-\setcounter{maxcomprange}{100000}
-\setcounter{mincompwidth}{1}
-\setcounter{afterword}{0}
-\setcounter{savedafterword}{0}
-\setcounter{annotator}{0}
-\setcounter{savedannotator}{0}
-\setcounter{author}{0}
-\setcounter{savedauthor}{0}
-\setcounter{bookauthor}{0}
-\setcounter{savedbookauthor}{0}
-\setcounter{commentator}{0}
-\setcounter{savedcommentator}{0}
-\setcounter{editor}{0}
-\setcounter{savededitor}{0}
-\setcounter{editora}{0}
-\setcounter{savededitora}{0}
-\setcounter{editorb}{0}
-\setcounter{savededitorb}{0}
-\setcounter{editorc}{0}
-\setcounter{savededitorc}{0}
-\setcounter{foreword}{0}
-\setcounter{savedforeword}{0}
-\setcounter{holder}{0}
-\setcounter{savedholder}{0}
-\setcounter{introduction}{0}
-\setcounter{savedintroduction}{0}
-\setcounter{namea}{0}
-\setcounter{savednamea}{0}
-\setcounter{nameb}{0}
-\setcounter{savednameb}{0}
-\setcounter{namec}{0}
-\setcounter{savednamec}{0}
-\setcounter{translator}{0}
-\setcounter{savedtranslator}{0}
-\setcounter{shortauthor}{0}
-\setcounter{savedshortauthor}{0}
-\setcounter{shorteditor}{0}
-\setcounter{savedshorteditor}{0}
-\setcounter{labelname}{0}
-\setcounter{savedlabelname}{0}
-\setcounter{institution}{0}
-\setcounter{savedinstitution}{0}
-\setcounter{lista}{0}
-\setcounter{savedlista}{0}
-\setcounter{listb}{0}
-\setcounter{savedlistb}{0}
-\setcounter{listc}{0}
-\setcounter{savedlistc}{0}
-\setcounter{listd}{0}
-\setcounter{savedlistd}{0}
-\setcounter{liste}{0}
-\setcounter{savedliste}{0}
-\setcounter{listf}{0}
-\setcounter{savedlistf}{0}
-\setcounter{location}{0}
-\setcounter{savedlocation}{0}
-\setcounter{organization}{0}
-\setcounter{savedorganization}{0}
-\setcounter{origlocation}{0}
-\setcounter{savedoriglocation}{0}
-\setcounter{origpublisher}{0}
-\setcounter{savedorigpublisher}{0}
-\setcounter{publisher}{0}
-\setcounter{savedpublisher}{0}
-\setcounter{language}{0}
-\setcounter{savedlanguage}{0}
-\setcounter{origlanguage}{0}
-\setcounter{savedoriglanguage}{0}
-\setcounter{pageref}{0}
-\setcounter{savedpageref}{0}
-\setcounter{textcitecount}{0}
-\setcounter{textcitetotal}{0}
-\setcounter{textcitemaxnames}{0}
-\setcounter{biburlnumpenalty}{0}
-\setcounter{biburlucpenalty}{0}
-\setcounter{biburllcpenalty}{0}
-\setcounter{smartand}{1}
-\setcounter{bbx:relatedcount}{0}
-\setcounter{bbx:relatedtotal}{0}
-\setcounter{parentequation}{0}
-\setcounter{ALG@line}{0}
-\setcounter{ALG@rem}{0}
-\setcounter{ALG@nested}{0}
-\setcounter{ALG@Lnr}{2}
-\setcounter{ALG@blocknr}{10}
-\setcounter{ALG@storecount}{0}
-\setcounter{ALG@tmpcounter}{0}
-\setcounter{section@level}{1}
-}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Appendices/AppendixA.tex Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,25 +0,0 @@
-% Appendix A
-
-\chapter{Frequently Asked Questions} % Main appendix title
-
-\label{AppendixA} % For referencing this appendix elsewhere, use \ref{AppendixA}
-
-\section{How do I change the colors of links?}
-
-The color of links can be changed to your liking using:
-
-{\small\verb!\hypersetup{urlcolor=red}!}, or
-
-{\small\verb!\hypersetup{citecolor=green}!}, or
-
-{\small\verb!\hypersetup{allcolor=blue}!}.
-
-\noindent If you want to completely hide the links, you can use:
-
-{\small\verb!\hypersetup{allcolors=.}!}, or even better:
-
-{\small\verb!\hypersetup{hidelinks}!}.
-
-\noindent If you want to have obvious links in the PDF but not the printed text, use:
-
-{\small\verb!\hypersetup{colorlinks=false}!}.
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Appendices/AppendixTemplate.tex Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,7 +0,0 @@
-% Appendix Template
-
-\chapter{Appendix Title Here} % Main appendix title
-
-\label{AppendixX} % Change X to a consecutive letter; for referencing this appendix elsewhere, use \ref{AppendixX}
-
-Write your Appendix content here.
\ No newline at end of file
Binary file PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Chapters/.DS_Store has changed
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Chapters/Chapter1.aux Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,184 +0,0 @@
-\relax
-\providecommand\hyper@newdestlabel[2]{}
-\@writefile{toc}{\contentsline {chapter}{\numberline {1}POSIX Lexing With Bit-codes}{1}{chapter.14}}
-\@writefile{lof}{\addvspace {10\p@ }}
-\@writefile{lot}{\addvspace {10\p@ }}
-\newlabel{Chapter1}{{1}{1}{POSIX Lexing With Bit-codes}{chapter.14}{}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.1}Introduction To Regexes}{1}{section.15}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.1.1}Back References in Regex--Non-Regular part}{4}{subsection.16}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.2}Our Solution--Brzozowski Derivatives}{4}{section.17}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.3}Preliminaries about Lexing Using Brzozowski derivatives}{4}{section.18}}
-\newlabel{graph:*}{{1.1}{6}{Preliminaries about Lexing Using Brzozowski derivatives}{equation.19}{}}
-\newlabel{graph:2}{{1.3}{8}{Values and the Lexing Algorithm by Sulzmann and Lu}{equation.22}{}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.4}Backgound}{14}{section.25}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.5}Engineering and Academic Approaches to Deal with Catastrophic Backtracking}{15}{section.26}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.5.1}DFA Approach}{15}{subsection.27}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.5.2}NFA Approach}{15}{subsection.28}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.6}Our Approach}{15}{section.29}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.6.1}Existing Work}{15}{subsection.30}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.7}What this Template Includes}{16}{section.31}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.7.1}Folders}{16}{subsection.32}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.7.2}Files}{16}{subsection.33}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.8}Filling in Your Information in the \texttt {\bfseries main.tex} File}{17}{section.34}}
-\newlabel{FillingFile}{{1.8}{17}{Filling in Your Information in the \file {main.tex} File}{section.34}{}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.9}The \texttt {main.tex} File Explained}{17}{section.35}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.10}Thesis Features and Conventions}{18}{section.36}}
-\newlabel{ThesisConventions}{{1.10}{18}{Thesis Features and Conventions}{section.36}{}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.10.1}Printing Format}{19}{subsection.37}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.10.2}Using US Letter Paper}{19}{subsection.38}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.10.3}References}{19}{subsection.39}}
-\@writefile{lot}{\contentsline {table}{\numberline {1.1}{\ignorespaces The effects of treatments X and Y on the four groups studied.\relax }}{20}{table.caption.43}}
-\providecommand*\caption@xref[2]{\@setref\relax\@undefined{#1}}
-\newlabel{tab:treatments}{{1.1}{20}{The effects of treatments X and Y on the four groups studied.\relax }{table.caption.43}{}}
-\@writefile{toc}{\contentsline {subsubsection}{A Note on bibtex}{20}{section*.41}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.10.4}Tables}{20}{subsection.42}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.10.5}Figures}{20}{subsection.44}}
-\@writefile{lof}{\contentsline {figure}{\numberline {1.1}{\ignorespaces An Electron}}{21}{figure.caption.45}}
-\newlabel{fig:Electron}{{1.1}{21}{An Electron}{figure.caption.45}{}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {1.10.6}Typesetting mathematics}{22}{subsection.46}}
-\newlabel{eqn:Einstein}{{1.4}{22}{Typesetting mathematics}{equation.47}{}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.11}Sectioning and Subsectioning}{22}{section.48}}
-\@writefile{toc}{\contentsline {section}{\numberline {1.12}In Closing}{22}{section.49}}
-\@setckpt{Chapters/Chapter1}{
-\setcounter{page}{23}
-\setcounter{equation}{4}
-\setcounter{enumi}{0}
-\setcounter{enumii}{0}
-\setcounter{enumiii}{0}
-\setcounter{enumiv}{0}
-\setcounter{footnote}{1}
-\setcounter{mpfootnote}{0}
-\setcounter{part}{0}
-\setcounter{chapter}{1}
-\setcounter{section}{12}
-\setcounter{subsection}{0}
-\setcounter{subsubsection}{0}
-\setcounter{paragraph}{0}
-\setcounter{subparagraph}{0}
-\setcounter{figure}{1}
-\setcounter{table}{1}
-\setcounter{LT@tables}{3}
-\setcounter{LT@chunks}{1}
-\setcounter{ContinuedFloat}{0}
-\setcounter{Item}{0}
-\setcounter{Hfootnote}{1}
-\setcounter{bookmark@seq@number}{29}
-\setcounter{tabx@nest}{0}
-\setcounter{listtotal}{0}
-\setcounter{listcount}{0}
-\setcounter{liststart}{0}
-\setcounter{liststop}{0}
-\setcounter{citecount}{0}
-\setcounter{citetotal}{0}
-\setcounter{multicitecount}{0}
-\setcounter{multicitetotal}{0}
-\setcounter{instcount}{6}
-\setcounter{maxnames}{3}
-\setcounter{minnames}{1}
-\setcounter{maxitems}{3}
-\setcounter{minitems}{1}
-\setcounter{citecounter}{0}
-\setcounter{savedcitecounter}{0}
-\setcounter{uniquelist}{0}
-\setcounter{uniquename}{0}
-\setcounter{refsection}{0}
-\setcounter{refsegment}{0}
-\setcounter{maxextratitle}{0}
-\setcounter{maxextratitleyear}{0}
-\setcounter{maxextradate}{0}
-\setcounter{maxextraalpha}{0}
-\setcounter{abbrvpenalty}{50}
-\setcounter{highnamepenalty}{50}
-\setcounter{lownamepenalty}{25}
-\setcounter{maxparens}{3}
-\setcounter{parenlevel}{0}
-\setcounter{mincomprange}{10}
-\setcounter{maxcomprange}{100000}
-\setcounter{mincompwidth}{1}
-\setcounter{afterword}{0}
-\setcounter{savedafterword}{0}
-\setcounter{annotator}{0}
-\setcounter{savedannotator}{0}
-\setcounter{author}{0}
-\setcounter{savedauthor}{0}
-\setcounter{bookauthor}{0}
-\setcounter{savedbookauthor}{0}
-\setcounter{commentator}{0}
-\setcounter{savedcommentator}{0}
-\setcounter{editor}{0}
-\setcounter{savededitor}{0}
-\setcounter{editora}{0}
-\setcounter{savededitora}{0}
-\setcounter{editorb}{0}
-\setcounter{savededitorb}{0}
-\setcounter{editorc}{0}
-\setcounter{savededitorc}{0}
-\setcounter{foreword}{0}
-\setcounter{savedforeword}{0}
-\setcounter{holder}{0}
-\setcounter{savedholder}{0}
-\setcounter{introduction}{0}
-\setcounter{savedintroduction}{0}
-\setcounter{namea}{0}
-\setcounter{savednamea}{0}
-\setcounter{nameb}{0}
-\setcounter{savednameb}{0}
-\setcounter{namec}{0}
-\setcounter{savednamec}{0}
-\setcounter{translator}{0}
-\setcounter{savedtranslator}{0}
-\setcounter{shortauthor}{0}
-\setcounter{savedshortauthor}{0}
-\setcounter{shorteditor}{0}
-\setcounter{savedshorteditor}{0}
-\setcounter{labelname}{0}
-\setcounter{savedlabelname}{0}
-\setcounter{institution}{0}
-\setcounter{savedinstitution}{0}
-\setcounter{lista}{0}
-\setcounter{savedlista}{0}
-\setcounter{listb}{0}
-\setcounter{savedlistb}{0}
-\setcounter{listc}{0}
-\setcounter{savedlistc}{0}
-\setcounter{listd}{0}
-\setcounter{savedlistd}{0}
-\setcounter{liste}{0}
-\setcounter{savedliste}{0}
-\setcounter{listf}{0}
-\setcounter{savedlistf}{0}
-\setcounter{location}{0}
-\setcounter{savedlocation}{0}
-\setcounter{organization}{0}
-\setcounter{savedorganization}{0}
-\setcounter{origlocation}{0}
-\setcounter{savedoriglocation}{0}
-\setcounter{origpublisher}{0}
-\setcounter{savedorigpublisher}{0}
-\setcounter{publisher}{0}
-\setcounter{savedpublisher}{0}
-\setcounter{language}{0}
-\setcounter{savedlanguage}{0}
-\setcounter{origlanguage}{0}
-\setcounter{savedoriglanguage}{0}
-\setcounter{pageref}{0}
-\setcounter{savedpageref}{0}
-\setcounter{textcitecount}{0}
-\setcounter{textcitetotal}{0}
-\setcounter{textcitemaxnames}{0}
-\setcounter{biburlnumpenalty}{0}
-\setcounter{biburlucpenalty}{0}
-\setcounter{biburllcpenalty}{0}
-\setcounter{smartand}{1}
-\setcounter{bbx:relatedcount}{0}
-\setcounter{bbx:relatedtotal}{0}
-\setcounter{parentequation}{0}
-\setcounter{ALG@line}{0}
-\setcounter{ALG@rem}{0}
-\setcounter{ALG@nested}{0}
-\setcounter{ALG@Lnr}{2}
-\setcounter{ALG@blocknr}{10}
-\setcounter{ALG@storecount}{0}
-\setcounter{ALG@tmpcounter}{0}
-\setcounter{section@level}{1}
-}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Chapters/Chapter1.tex Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,1611 +0,0 @@
-% Chapter 1
-
-\chapter{Introduction} % Main chapter title
-
-\label{Chapter1} % For referencing the chapter elsewhere, use \ref{Chapter1}
-
-%----------------------------------------------------------------------------------------
-
-% Define some commands to keep the formatting separated from the content
-\newcommand{\keyword}[1]{\textbf{#1}}
-\newcommand{\tabhead}[1]{\textbf{#1}}
-\newcommand{\code}[1]{\texttt{#1}}
-\newcommand{\file}[1]{\texttt{\bfseries#1}}
-\newcommand{\option}[1]{\texttt{\itshape#1}}
-
-
-\newcommand{\dn}{\stackrel{\mbox{\scriptsize def}}{=}}%
-\newcommand{\ZERO}{\mbox{\bf 0}}
-\newcommand{\ONE}{\mbox{\bf 1}}
-\def\lexer{\mathit{lexer}}
-\def\mkeps{\mathit{mkeps}}
-
-\def\DFA{\textit{DFA}}
-\def\bmkeps{\textit{bmkeps}}
-\def\retrieve{\textit{retrieve}}
-\def\blexer{\textit{blexer}}
-\def\flex{\textit{flex}}
-\def\inj{\mathit{inj}}
-\def\Empty{\mathit{Empty}}
-\def\Left{\mathit{Left}}
-\def\Right{\mathit{Right}}
-\def\Stars{\mathit{Stars}}
-\def\Char{\mathit{Char}}
-\def\Seq{\mathit{Seq}}
-\def\Der{\mathit{Der}}
-\def\nullable{\mathit{nullable}}
-\def\Z{\mathit{Z}}
-\def\S{\mathit{S}}
-\def\rup{r^\uparrow}
-\def\simp{\mathit{simp}}
-\def\simpALTs{\mathit{simp}\_\mathit{ALTs}}
-\def\map{\mathit{map}}
-\def\distinct{\mathit{distinct}}
-\def\blexersimp{\mathit{blexer}\_\mathit{simp}}
-%----------------------------------------------------------------------------------------
-%This part is about regular expressions, Brzozowski derivatives,
-%and a bit-coded lexing algorithm with proven correctness and time bounds.
-Regular expressions are widely used in modern day programming tasks.
-Be it IDE with syntax hightlighting and auto completion,
-command line tools like $\mathit{grep}$ that facilitates easy
-processing of text by search and replace, network intrusion
-detection systems that rejects suspicious traffic, or compiler
-front-ends--there is always an important phase of the
-task that involves matching a regular
-exression with a string.
-Given its usefulness and ubiquity, one would imagine that
-modern regular expression matching implementations
-are mature and fully-studied.
-
-If you go to a popular programming language's
-regex engine,
-you can supply it with regex and strings of your own,
-and get matching/lexing information such as how a
-sub-part of the regex matches a sub-part of the string.
-These lexing libraries are on average quite fast.
-For example, the regex engines some network intrusion detection
-systems use are able to process
- megabytes or even gigabytes of network traffic per second.
-
-Why do we need to have our version, if the algorithms work well on
-average?
-
-
-Take $(a^*)^*\,b$ and ask whether
-strings of the form $aa..a$ match this regular
-expression. Obviously this is not the case---the expected $b$ in the last
-position is missing. One would expect that modern regular expression
-matching engines can find this out very quickly. Alas, if one tries
-this example in JavaScript, Python or Java 8 with strings like 28
-$a$'s, one discovers that this decision takes around 30 seconds and
-takes considerably longer when adding a few more $a$'s, as the graphs
-below show:
-
-\begin{center}
-\begin{tabular}{@{}c@{\hspace{0mm}}c@{\hspace{0mm}}c@{}}
-\begin{tikzpicture}
-\begin{axis}[
- xlabel={$n$},
- x label style={at={(1.05,-0.05)}},
- ylabel={time in secs},
- enlargelimits=false,
- xtick={0,5,...,30},
- xmax=33,
- ymax=35,
- ytick={0,5,...,30},
- scaled ticks=false,
- axis lines=left,
- width=5cm,
- height=4cm,
- legend entries={JavaScript},
- legend pos=north west,
- legend cell align=left]
-\addplot[red,mark=*, mark options={fill=white}] table {re-js.data};
-\end{axis}
-\end{tikzpicture}
- &
-\begin{tikzpicture}
-\begin{axis}[
- xlabel={$n$},
- x label style={at={(1.05,-0.05)}},
- %ylabel={time in secs},
- enlargelimits=false,
- xtick={0,5,...,30},
- xmax=33,
- ymax=35,
- ytick={0,5,...,30},
- scaled ticks=false,
- axis lines=left,
- width=5cm,
- height=4cm,
- legend entries={Python},
- legend pos=north west,
- legend cell align=left]
-\addplot[blue,mark=*, mark options={fill=white}] table {re-python2.data};
-\end{axis}
-\end{tikzpicture}
- &
-\begin{tikzpicture}
-\begin{axis}[
- xlabel={$n$},
- x label style={at={(1.05,-0.05)}},
- %ylabel={time in secs},
- enlargelimits=false,
- xtick={0,5,...,30},
- xmax=33,
- ymax=35,
- ytick={0,5,...,30},
- scaled ticks=false,
- axis lines=left,
- width=5cm,
- height=4cm,
- legend entries={Java 8},
- legend pos=north west,
- legend cell align=left]
-\addplot[cyan,mark=*, mark options={fill=white}] table {re-java.data};
-\end{axis}
-\end{tikzpicture}\\
-\multicolumn{3}{c}{Graphs: Runtime for matching $(a^*)^*\,b$ with strings
- of the form $\underbrace{aa..a}_{n}$.}
-\end{tabular}
-\end{center}
-
-
-This is clearly exponential behaviour, and
-is triggered by some relatively simple regex patterns.
-
-
-
-The opens up the possibility of
- a ReDoS (regular expression denial-of-service ) attack.
- \section{Why Backtracking Algorithm for Regexes?}
-
-Theoretical results say that regular expression matching
-should be linear with respect to the input. You could construct
-an NFA via Thompson construction, and simulate running it.
-This would be linear.
-Or you could determinize the NFA into a DFA, and minimize that
-DFA. Once you have the DFA, the running time is also linear, requiring just
-one scanning pass of the input.
-
-But modern regex libraries in popular language engines
- often want to support richer constructs
-than the most basic regular expressions such as bounded repetitions
-and back references.
-%put in illustrations
-%a{1}{3}
-These make a DFA construction impossible because
-of an exponential states explosion.
- They also want to support lexing rather than just matching
- for tasks that involves text processing.
-
- Existing regex libraries either pose restrictions on the user input, or does
- not give linear running time guarantee.
- %TODO: give examples such as RE2 GOLANG 1000 restriction, rust no repetitions
- For example, the Rust regex engine claims to be linear,
- but does not support lookarounds and back-references.
- The GoLang regex library does not support over 1000 repetitions.
- Java and Python both support back-references, but shows
-catastrophic backtracking behaviours on inputs without back-references(
-when the language is still regular).
- %TODO: test performance of Rust on (((((a*a*)b*)b){20})*)c baabaabababaabaaaaaaaaababaaaababababaaaabaaabaaaaaabaabaabababaababaaaaaaaaababaaaababababaaaaaaaaaaaaac
- %TODO: verify the fact Rust does not allow 1000+ reps
- %TODO: Java 17 updated graphs? Is it ok to still use Java 8 graphs?
- Another thing about the these libraries is that there
- is no correctness guarantee.
- In some cases they either fails to generate a lexing result when there is a match,
- or gives the wrong way of matching.
-
-
-This superlinear blowup in matching algorithms sometimes causes
-considerable grief in real life: for example on 20 July 2016 one evil
-regular expression brought the webpage
-\href{http://stackexchange.com}{Stack Exchange} to its
-%knees.\footnote{\url{https://stackstatus.net/post/147710624694/outage-postmortem-july-20-2016}}
-In this instance, a regular expression intended to just trim white
-spaces from the beginning and the end of a line actually consumed
-massive amounts of CPU-resources---causing web servers to grind to a
-halt. This happened when a post with 20,000 white spaces was submitted,
-but importantly the white spaces were neither at the beginning nor at
-the end. As a result, the regular expression matching engine needed to
-backtrack over many choices. In this example, the time needed to process
-the string was $O(n^2)$ with respect to the string length. This
-quadratic overhead was enough for the homepage of Stack Exchange to
-respond so slowly that the load balancer assumed there must be some
-attack and therefore stopped the servers from responding to any
-requests. This made the whole site become unavailable. Another very
-recent example is a global outage of all Cloudflare servers on 2 July
-2019. A poorly written regular expression exhibited exponential
-behaviour and exhausted CPUs that serve HTTP traffic. Although the
-outage had several causes, at the heart was a regular expression that
-was used to monitor network
-%traffic.\footnote{\url{https://blog.cloudflare.com/details-of-the-cloudflare-outage-on-july-2-2019/}}
-
-It turns out that regex libraries not only suffer from
-exponential backtracking problems,
-but also undesired (or even buggy) outputs.
-%TODO: comment from who
-xxx commented that most regex libraries are not
-correctly implementing the POSIX (maximum-munch)
-rule of regular expression matching.
-A concrete example would be
-the regex
-\begin{verbatim}
-(((((a*a*)b*)b){20})*)c
-\end{verbatim}
-and the string
-\begin{verbatim}
-baabaabababaabaaaaaaaaababaa
-aababababaaaabaaabaaaaaabaab
-aabababaababaaaaaaaaababaaaa
-babababaaaaaaaaaaaaac
-\end{verbatim}
-
-This seemingly complex regex simply says "some $a$'s
-followed by some $b$'s then followed by 1 single $b$,
-and this iterates 20 times, finally followed by a $c$.
-And a POSIX match would involve the entire string,"eating up"
-all the $b$'s in it.
-%TODO: give a coloured example of how this matches POSIXly
-
-This regex would trigger catastrophic backtracking in
-languages like Python and Java,
-whereas it gives a correct but uninformative (non-POSIX)
-match in languages like Go or .NET--The match with only
-character $c$.
-
-Backtracking or depth-first search might give us
-exponential running time, and quite a few tools
-avoid that by determinising the $\mathit{NFA}$
-into a $\mathit{DFA}$ and minimizes it.
-For example, $\mathit{LEX}$ and $\mathit{JFLEX}$ are tools
-in $C$ and $\mathit{JAVA}$ that generates $\mathit{DFA}$-based
-lexers.
-However, they do not scale well with bounded repetitions.
-Bounded repetitions, usually written in the form
-$r^{\{c\}}$ (where $c$ is a constant natural number),
-denotes a regular expression accepting strings
-that can be divided into $c$ substrings, and each
-substring is in $r$.
-%TODO: draw example NFA.
-For the regular expression $(a|b)^*a(a|b)^{\{2\}}$,
-an $\mathit{NFA}$ describing it would look like:
-\begin{center}
-\begin{tikzpicture}[shorten >=1pt,node distance=2cm,on grid,auto]
- \node[state,initial] (q_0) {$q_0$};
- \node[state, red] (q_1) [right=of q_0] {$q_1$};
- \node[state, red] (q_2) [right=of q_1] {$q_2$};
- \node[state,accepting](q_3) [right=of q_2] {$q_3$};
- \path[->]
- (q_0) edge node {a} (q_1)
- edge [loop below] node {a,b} ()
- (q_1) edge node {a,b} (q_2)
- edge [loop above] node {0} ()
- (q_2) edge node {a,b} (q_3);
-\end{tikzpicture}
-\end{center}
-The red states are "counter states" which counts down
-the number of characters needed in addition to the current
-string to make a successful match.
-For example, state $q_1$ indicates a match that has
-gone past the $(a|b)$ part of $(a|b)^*a(a|b)^{\{2\}}$,
-and just consumed the "delimiter" $a$ in the middle, and
-need to match 2 more iterations of $a|b$ to complete.
-State $q_2$ on the other hand, can be viewed as a state
-after $q_1$ has consumed 1 character, and just waits
-for 1 more character to complete.
-Depending on the actual characters appearing in the
-input string, the states $q_1$ and $q_2$ may or may
-not be active, independent from each other.
-A $\mathit{DFA}$ for such an $\mathit{NFA}$ would
-contain at least 4 non-equivalent states that cannot be merged,
-because subset states indicating which of $q_1$ and $q_2$
-are active are at least four: $\phi$, $\{q_1\}$,
-$\{q_2\}$, $\{q_1, q_2\}$.
-Generalizing this to regular expressions with larger
-bounded repetitions number, we have $r^*ar^{\{n\}}$
-in general would require at least $2^n$ states
-in a $\mathit{DFA}$. This is to represent all different
-configurations of "countdown" states.
-For those regexes, tools such as $\mathit{JFLEX}$
-would generate gigantic $\mathit{DFA}$'s or even
-give out memory errors.
-
-For this reason, regex libraries that support
-bounded repetitions often choose to use the $\mathit{NFA}$
-approach.
-One can simulate the $\mathit{NFA}$ running in two ways:
-one by keeping track of all active states after consuming
-a character, and update that set of states iteratively.
-This is a breadth-first-search of the $\mathit{NFA}$.
-for a path terminating
-at an accepting state.
-Languages like $\mathit{GO}$ and $\mathit{RUST}$ use this
-type of $\mathit{NFA}$ simulation, and guarantees a linear runtime
-in terms of input string length.
-The other way to use $\mathit{NFA}$ for matching is to take
-a single state in a path each time, and backtrack if that path
-fails. This is a depth-first-search that could end up
-with exponential run time.
-The reason behind backtracking algorithms in languages like
-Java and Python is that they support back-references.
-\subsection{Back References in Regex--Non-Regular part}
-If we label sub-expressions by parenthesizing them and give
-them a number by the order their opening parenthesis appear,
-$\underset{1}{(}\ldots\underset{2}{(}\ldots\underset{3}{(}\ldots\underset{4}{(}\ldots)\ldots)\ldots)\ldots)$
-We can use the following syntax to denote that we want a string just matched by a
-sub-expression to appear at a certain location again exactly:
-$(.*)\backslash 1$
-would match the string like $\mathit{bobo}$, $\mathit{weewee}$ and etc.
-
-Back-reference is a construct in the "regex" standard
-that programmers found quite useful, but not exactly
-regular any more.
-In fact, that allows the regex construct to express
-languages that cannot be contained in context-free
-languages
-For example, the back reference $(a^*)\backslash 1 \backslash 1$
-expresses the language $\{a^na^na^n\mid n \in N\}$,
-which cannot be expressed by context-free grammars.
-To express such a language one would need context-sensitive
-grammars, and matching/parsing for such grammars is NP-hard in
-general.
-%TODO:cite reference for NP-hardness of CSG matching
-For such constructs, the most intuitive way of matching is
-using backtracking algorithms, and there are no known algorithms
-that does not backtrack.
-%TODO:read a bit more about back reference algorithms
-
-
-
-
-\section{Our Solution--Brzozowski Derivatives}
-
-
-
- Is it possible to have a regex lexing algorithm with proven correctness and
- time complexity, which allows easy extensions to
- constructs like
- bounded repetitions, negation, lookarounds, and even back-references?
-
- We propose Brzozowski's derivatives as a solution to this problem.
-
-The main contribution of this thesis is a proven correct lexing algorithm
-with formalized time bounds.
-To our best knowledge, there is no lexing libraries using Brzozowski derivatives
-that have a provable time guarantee,
-and claims about running time are usually speculative and backed by thin empirical
-evidence.
-%TODO: give references
-For example, Sulzmann and Lu had proposed an algorithm in which they
-claim a linear running time.
-But that was falsified by our experiments and the running time
-is actually $\Omega(2^n)$ in the worst case.
-A similar claim about a theoretical runtime of $O(n^2)$ is made for the Verbatim
-%TODO: give references
-lexer, which calculates POSIX matches and is based on derivatives.
-They formalized the correctness of the lexer, but not the complexity.
-In the performance evaluation section, they simply analyzed the run time
-of matching $a$ with the string $\underbrace{a \ldots a}_{\text{n a's}}$
-and concluded that the algorithm is quadratic in terms of input length.
-When we tried out their extracted OCaml code with our example $(a+aa)^*$,
-the time it took to lex only 40 $a$'s was 5 minutes.
-We therefore believe our results of a proof of performance on general
-inputs rather than specific examples a novel contribution.\\
-
- \section{Preliminaries about Lexing Using Brzozowski derivatives}
- In the last fifteen or so years, Brzozowski's derivatives of regular
-expressions have sparked quite a bit of interest in the functional
-programming and theorem prover communities.
-The beauty of
-Brzozowski's derivatives \parencite{Brzozowski1964} is that they are neatly
-expressible in any functional language, and easily definable and
-reasoned about in theorem provers---the definitions just consist of
-inductive datatypes and simple recursive functions.
-
-Suppose we have an alphabet $\Sigma$, the strings whose characters
-are from $\Sigma$
-can be expressed as $\Sigma^*$.
-
-We use patterns to define a set of strings concisely. Regular expressions
-are one of such patterns systems:
-The basic regular expressions are defined inductively
- by the following grammar:
-\[ r ::= \ZERO \mid \ONE
- \mid c
- \mid r_1 \cdot r_2
- \mid r_1 + r_2
- \mid r^*
-\]
-
-The language or set of strings defined by regular expressions are defined as
-%TODO: FILL in the other defs
-\begin{center}
-\begin{tabular}{lcl}
-$L \; r_1 + r_2$ & $\dn$ & $ L \; r_1 \cup L \; r_2$\\
-$L \; r_1 \cdot r_2$ & $\dn$ & $ L \; r_1 \cap L \; r_2$\\
-\end{tabular}
-\end{center}
-Which are also called the "language interpretation".
-
-
-
-The Brzozowski derivative w.r.t character $c$ is an operation on the regex,
-where the operation transforms the regex to a new one containing
-strings without the head character $c$.
-
-Formally, we define first such a transformation on any string set, which
-we call semantic derivative:
-\begin{center}
-$\Der \; c\; \textit{StringSet} = \{s \mid c :: s \in StringSet\}$
-\end{center}
-Mathematically, it can be expressed as the
-
-If the $\textit{StringSet}$ happen to have some structure, for example,
-if it is regular, then we have that it
-
-The the derivative of regular expression, denoted as
-$r \backslash c$, is a function that takes parameters
-$r$ and $c$, and returns another regular expression $r'$,
-which is computed by the following recursive function:
-
-\begin{center}
-\begin{tabular}{lcl}
- $\ZERO \backslash c$ & $\dn$ & $\ZERO$\\
- $\ONE \backslash c$ & $\dn$ & $\ZERO$\\
- $d \backslash c$ & $\dn$ &
- $\mathit{if} \;c = d\;\mathit{then}\;\ONE\;\mathit{else}\;\ZERO$\\
-$(r_1 + r_2)\backslash c$ & $\dn$ & $r_1 \backslash c \,+\, r_2 \backslash c$\\
-$(r_1 \cdot r_2)\backslash c$ & $\dn$ & $\mathit{if} \, nullable(r_1)$\\
- & & $\mathit{then}\;(r_1\backslash c) \cdot r_2 \,+\, r_2\backslash c$\\
- & & $\mathit{else}\;(r_1\backslash c) \cdot r_2$\\
- $(r^*)\backslash c$ & $\dn$ & $(r\backslash c) \cdot r^*$\\
-\end{tabular}
-\end{center}
-\noindent
-\noindent
-
-The $\nullable$ function tests whether the empty string $""$
-is in the language of $r$:
-
-
-\begin{center}
- \begin{tabular}{lcl}
- $\nullable(\ZERO)$ & $\dn$ & $\mathit{false}$ \\
- $\nullable(\ONE)$ & $\dn$ & $\mathit{true}$ \\
- $\nullable(c)$ & $\dn$ & $\mathit{false}$ \\
- $\nullable(r_1 + r_2)$ & $\dn$ & $\nullable(r_1) \vee \nullable(r_2)$ \\
- $\nullable(r_1\cdot r_2)$ & $\dn$ & $\nullable(r_1) \wedge \nullable(r_2)$ \\
- $\nullable(r^*)$ & $\dn$ & $\mathit{true}$ \\
- \end{tabular}
-\end{center}
-\noindent
-The empty set does not contain any string and
-therefore not the empty string, the empty string
-regular expression contains the empty string
-by definition, the character regular expression
-is the singleton that contains character only,
-and therefore does not contain the empty string,
-the alternative regular expression(or "or" expression)
-might have one of its children regular expressions
-being nullable and any one of its children being nullable
-would suffice. The sequence regular expression
-would require both children to have the empty string
-to compose an empty string and the Kleene star
-operation naturally introduced the empty string.
-
-We can give the meaning of regular expressions derivatives
-by language interpretation:
-
-
-
-
-\begin{center}
-\begin{tabular}{lcl}
- $\ZERO \backslash c$ & $\dn$ & $\ZERO$\\
- $\ONE \backslash c$ & $\dn$ & $\ZERO$\\
- $d \backslash c$ & $\dn$ &
- $\mathit{if} \;c = d\;\mathit{then}\;\ONE\;\mathit{else}\;\ZERO$\\
-$(r_1 + r_2)\backslash c$ & $\dn$ & $r_1 \backslash c \,+\, r_2 \backslash c$\\
-$(r_1 \cdot r_2)\backslash c$ & $\dn$ & $\mathit{if} \, nullable(r_1)$\\
- & & $\mathit{then}\;(r_1\backslash c) \cdot r_2 \,+\, r_2\backslash c$\\
- & & $\mathit{else}\;(r_1\backslash c) \cdot r_2$\\
- $(r^*)\backslash c$ & $\dn$ & $(r\backslash c) \cdot r^*$\\
-\end{tabular}
-\end{center}
-\noindent
-\noindent
-The function derivative, written $\backslash c$,
-defines how a regular expression evolves into
-a new regular expression after all the string it contains
-is chopped off a certain head character $c$.
-The most involved cases are the sequence
-and star case.
-The sequence case says that if the first regular expression
-contains an empty string then second component of the sequence
-might be chosen as the target regular expression to be chopped
-off its head character.
-The star regular expression unwraps the iteration of
-regular expression and attack the star regular expression
-to its back again to make sure there are 0 or more iterations
-following this unfolded iteration.
-
-
-The main property of the derivative operation
-that enables us to reason about the correctness of
-an algorithm using derivatives is
-
-\begin{center}
-$c\!::\!s \in L(r)$ holds
-if and only if $s \in L(r\backslash c)$.
-\end{center}
-
-\noindent
-We can generalise the derivative operation shown above for single characters
-to strings as follows:
-
-\begin{center}
-\begin{tabular}{lcl}
-$r \backslash (c\!::\!s) $ & $\dn$ & $(r \backslash c) \backslash s$ \\
-$r \backslash [\,] $ & $\dn$ & $r$
-\end{tabular}
-\end{center}
-
-\noindent
-and then define Brzozowski's regular-expression matching algorithm as:
-
-\[
-match\;s\;r \;\dn\; nullable(r\backslash s)
-\]
-
-\noindent
-Assuming the a string is given as a sequence of characters, say $c_0c_1..c_n$,
-this algorithm presented graphically is as follows:
-
-\begin{equation}\label{graph:*}
-\begin{tikzcd}
-r_0 \arrow[r, "\backslash c_0"] & r_1 \arrow[r, "\backslash c_1"] & r_2 \arrow[r, dashed] & r_n \arrow[r,"\textit{nullable}?"] & \;\textrm{YES}/\textrm{NO}
-\end{tikzcd}
-\end{equation}
-
-\noindent
-where we start with a regular expression $r_0$, build successive
-derivatives until we exhaust the string and then use \textit{nullable}
-to test whether the result can match the empty string. It can be
-relatively easily shown that this matcher is correct (that is given
-an $s = c_0...c_{n-1}$ and an $r_0$, it generates YES if and only if $s \in L(r_0)$).
-
-Beautiful and simple definition.
-
-If we implement the above algorithm naively, however,
-the algorithm can be excruciatingly slow. For example, when starting with the regular
-expression $(a + aa)^*$ and building 12 successive derivatives
-w.r.t.~the character $a$, one obtains a derivative regular expression
-with more than 8000 nodes (when viewed as a tree). Operations like
-$\backslash$ and $\nullable$ need to traverse such trees and
-consequently the bigger the size of the derivative the slower the
-algorithm.
-
-Brzozowski was quick in finding that during this process a lot useless
-$\ONE$s and $\ZERO$s are generated and therefore not optimal.
-He also introduced some "similarity rules" such
-as $P+(Q+R) = (P+Q)+R$ to merge syntactically
-different but language-equivalent sub-regexes to further decrease the size
-of the intermediate regexes.
-
-More simplifications are possible, such as deleting duplicates
-and opening up nested alternatives to trigger even more simplifications.
-And suppose we apply simplification after each derivative step, and compose
-these two operations together as an atomic one: $a \backslash_{simp}\,c \dn
-\textit{simp}(a \backslash c)$. Then we can build
-a matcher without having cumbersome regular expressions.
-
-
-If we want the size of derivatives in the algorithm to
-stay even lower, we would need more aggressive simplifications.
-Essentially we need to delete useless $\ZERO$s and $\ONE$s, as well as
-deleting duplicates whenever possible. For example, the parentheses in
-$(a+b) \cdot c + b\cdot c$ can be opened up to get $a\cdot c + b \cdot c + b
-\cdot c$, and then simplified to just $a \cdot c + b \cdot c$. Another
-example is simplifying $(a^*+a) + (a^*+ \ONE) + (a +\ONE)$ to just
-$a^*+a+\ONE$. Adding these more aggressive simplification rules help us
-to achieve a very tight size bound, namely,
- the same size bound as that of the \emph{partial derivatives}.
-
-Building derivatives and then simplify them.
-So far so good. But what if we want to
-do lexing instead of just a YES/NO answer?
-This requires us to go back again to the world
-without simplification first for a moment.
-Sulzmann and Lu~\cite{Sulzmann2014} first came up with a nice and
-elegant(arguably as beautiful as the original
-derivatives definition) solution for this.
-
-\subsection*{Values and the Lexing Algorithm by Sulzmann and Lu}
-
-
-They first defined the datatypes for storing the
-lexing information called a \emph{value} or
-sometimes also \emph{lexical value}. These values and regular
-expressions correspond to each other as illustrated in the following
-table:
-
-\begin{center}
- \begin{tabular}{c@{\hspace{20mm}}c}
- \begin{tabular}{@{}rrl@{}}
- \multicolumn{3}{@{}l}{\textbf{Regular Expressions}}\medskip\\
- $r$ & $::=$ & $\ZERO$\\
- & $\mid$ & $\ONE$ \\
- & $\mid$ & $c$ \\
- & $\mid$ & $r_1 \cdot r_2$\\
- & $\mid$ & $r_1 + r_2$ \\
- \\
- & $\mid$ & $r^*$ \\
- \end{tabular}
- &
- \begin{tabular}{@{\hspace{0mm}}rrl@{}}
- \multicolumn{3}{@{}l}{\textbf{Values}}\medskip\\
- $v$ & $::=$ & \\
- & & $\Empty$ \\
- & $\mid$ & $\Char(c)$ \\
- & $\mid$ & $\Seq\,v_1\, v_2$\\
- & $\mid$ & $\Left(v)$ \\
- & $\mid$ & $\Right(v)$ \\
- & $\mid$ & $\Stars\,[v_1,\ldots\,v_n]$ \\
- \end{tabular}
- \end{tabular}
-\end{center}
-
-\noindent
-One regular expression can have multiple lexical values. For example
-for the regular expression $(a+b)^*$, it has a infinite list of
-values corresponding to it: $\Stars\,[]$, $\Stars\,[\Left(Char(a))]$,
-$\Stars\,[\Right(Char(b))]$, $\Stars\,[\Left(Char(a),\,\Right(Char(b))]$,
-$\ldots$, and vice versa.
-Even for the regular expression matching a certain string, there could
-still be more than one value corresponding to it.
-Take the example where $r= (a^*\cdot a^*)^*$ and the string
-$s=\underbrace{aa\ldots a}_\text{n \textit{a}s}$.
-The number of different ways of matching
-without allowing any value under a star to be flattened
-to an empty string can be given by the following formula:
-\begin{center}
- $C_n = (n+1)+n C_1+\ldots + 2 C_{n-1}$
-\end{center}
-and a closed form formula can be calculated to be
-\begin{equation}
- C_n =\frac{(2+\sqrt{2})^n - (2-\sqrt{2})^n}{4\sqrt{2}}
-\end{equation}
-which is clearly in exponential order.
-A lexer aimed at getting all the possible values has an exponential
-worst case runtime. Therefore it is impractical to try to generate
-all possible matches in a run. In practice, we are usually
-interested about POSIX values, which by intuition always
-match the leftmost regular expression when there is a choice
-and always match a sub part as much as possible before proceeding
-to the next token. For example, the above example has the POSIX value
-$ \Stars\,[\Seq(Stars\,[\underbrace{\Char(a),\ldots,\Char(a)}_\text{n iterations}], Stars\,[])]$.
-The output of an algorithm we want would be a POSIX matching
-encoded as a value.
-The contribution of Sulzmann and Lu is an extension of Brzozowski's
-algorithm by a second phase (the first phase being building successive
-derivatives---see \eqref{graph:*}). In this second phase, a POSIX value
-is generated in case the regular expression matches the string.
-Pictorially, the Sulzmann and Lu algorithm is as follows:
-
-\begin{ceqn}
-\begin{equation}\label{graph:2}
-\begin{tikzcd}
-r_0 \arrow[r, "\backslash c_0"] \arrow[d] & r_1 \arrow[r, "\backslash c_1"] \arrow[d] & r_2 \arrow[r, dashed] \arrow[d] & r_n \arrow[d, "mkeps" description] \\
-v_0 & v_1 \arrow[l,"inj_{r_0} c_0"] & v_2 \arrow[l, "inj_{r_1} c_1"] & v_n \arrow[l, dashed]
-\end{tikzcd}
-\end{equation}
-\end{ceqn}
-
-
-\noindent
-For convenience, we shall employ the following notations: the regular
-expression we start with is $r_0$, and the given string $s$ is composed
-of characters $c_0 c_1 \ldots c_{n-1}$. In the first phase from the
-left to right, we build the derivatives $r_1$, $r_2$, \ldots according
-to the characters $c_0$, $c_1$ until we exhaust the string and obtain
-the derivative $r_n$. We test whether this derivative is
-$\textit{nullable}$ or not. If not, we know the string does not match
-$r$ and no value needs to be generated. If yes, we start building the
-values incrementally by \emph{injecting} back the characters into the
-earlier values $v_n, \ldots, v_0$. This is the second phase of the
-algorithm from the right to left. For the first value $v_n$, we call the
-function $\textit{mkeps}$, which builds a POSIX lexical value
-for how the empty string has been matched by the (nullable) regular
-expression $r_n$. This function is defined as
-
- \begin{center}
- \begin{tabular}{lcl}
- $\mkeps(\ONE)$ & $\dn$ & $\Empty$ \\
- $\mkeps(r_{1}+r_{2})$ & $\dn$
- & \textit{if} $\nullable(r_{1})$\\
- & & \textit{then} $\Left(\mkeps(r_{1}))$\\
- & & \textit{else} $\Right(\mkeps(r_{2}))$\\
- $\mkeps(r_1\cdot r_2)$ & $\dn$ & $\Seq\,(\mkeps\,r_1)\,(\mkeps\,r_2)$\\
- $mkeps(r^*)$ & $\dn$ & $\Stars\,[]$
- \end{tabular}
- \end{center}
-
-
-\noindent
-After the $\mkeps$-call, we inject back the characters one by one in order to build
-the lexical value $v_i$ for how the regex $r_i$ matches the string $s_i$
-($s_i = c_i \ldots c_{n-1}$ ) from the previous lexical value $v_{i+1}$.
-After injecting back $n$ characters, we get the lexical value for how $r_0$
-matches $s$. The POSIX value is maintained throught out the process.
-For this Sulzmann and Lu defined a function that reverses
-the ``chopping off'' of characters during the derivative phase. The
-corresponding function is called \emph{injection}, written
-$\textit{inj}$; it takes three arguments: the first one is a regular
-expression ${r_{i-1}}$, before the character is chopped off, the second
-is a character ${c_{i-1}}$, the character we want to inject and the
-third argument is the value ${v_i}$, into which one wants to inject the
-character (it corresponds to the regular expression after the character
-has been chopped off). The result of this function is a new value. The
-definition of $\textit{inj}$ is as follows:
-
-\begin{center}
-\begin{tabular}{l@{\hspace{1mm}}c@{\hspace{1mm}}l}
- $\textit{inj}\,(c)\,c\,Empty$ & $\dn$ & $Char\,c$\\
- $\textit{inj}\,(r_1 + r_2)\,c\,\Left(v)$ & $\dn$ & $\Left(\textit{inj}\,r_1\,c\,v)$\\
- $\textit{inj}\,(r_1 + r_2)\,c\,Right(v)$ & $\dn$ & $Right(\textit{inj}\,r_2\,c\,v)$\\
- $\textit{inj}\,(r_1 \cdot r_2)\,c\,Seq(v_1,v_2)$ & $\dn$ & $Seq(\textit{inj}\,r_1\,c\,v_1,v_2)$\\
- $\textit{inj}\,(r_1 \cdot r_2)\,c\,\Left(Seq(v_1,v_2))$ & $\dn$ & $Seq(\textit{inj}\,r_1\,c\,v_1,v_2)$\\
- $\textit{inj}\,(r_1 \cdot r_2)\,c\,Right(v)$ & $\dn$ & $Seq(\textit{mkeps}(r_1),\textit{inj}\,r_2\,c\,v)$\\
- $\textit{inj}\,(r^*)\,c\,Seq(v,Stars\,vs)$ & $\dn$ & $Stars((\textit{inj}\,r\,c\,v)\,::\,vs)$\\
-\end{tabular}
-\end{center}
-
-\noindent This definition is by recursion on the ``shape'' of regular
-expressions and values.
-The clauses basically do one thing--identifying the ``holes'' on
-value to inject the character back into.
-For instance, in the last clause for injecting back to a value
-that would turn into a new star value that corresponds to a star,
-we know it must be a sequence value. And we know that the first
-value of that sequence corresponds to the child regex of the star
-with the first character being chopped off--an iteration of the star
-that had just been unfolded. This value is followed by the already
-matched star iterations we collected before. So we inject the character
-back to the first value and form a new value with this new iteration
-being added to the previous list of iterations, all under the $Stars$
-top level.
-
-We have mentioned before that derivatives without simplification
-can get clumsy, and this is true for values as well--they reflect
-the regular expressions size by definition.
-
-One can introduce simplification on the regex and values, but have to
-be careful in not breaking the correctness as the injection
-function heavily relies on the structure of the regexes and values
-being correct and match each other.
-It can be achieved by recording some extra rectification functions
-during the derivatives step, and applying these rectifications in
-each run during the injection phase.
-And we can prove that the POSIX value of how
-regular expressions match strings will not be affected---although is much harder
-to establish. Some initial results in this regard have been
-obtained in \cite{AusafDyckhoffUrban2016}.
-
-%Brzozowski, after giving the derivatives and simplification,
-%did not explore lexing with simplification or he may well be
-%stuck on an efficient simplificaiton with a proof.
-%He went on to explore the use of derivatives together with
-%automaton, and did not try lexing using derivatives.
-
-We want to get rid of complex and fragile rectification of values.
-Can we not create those intermediate values $v_1,\ldots v_n$,
-and get the lexing information that should be already there while
-doing derivatives in one pass, without a second phase of injection?
-In the meantime, can we make sure that simplifications
-are easily handled without breaking the correctness of the algorithm?
-
-Sulzmann and Lu solved this problem by
-introducing additional informtaion to the
-regular expressions called \emph{bitcodes}.
-
-\subsection*{Bit-coded Algorithm}
-Bits and bitcodes (lists of bits) are defined as:
-
-\begin{center}
- $b ::= 1 \mid 0 \qquad
-bs ::= [] \mid b::bs
-$
-\end{center}
-
-\noindent
-The $1$ and $0$ are not in bold in order to avoid
-confusion with the regular expressions $\ZERO$ and $\ONE$. Bitcodes (or
-bit-lists) can be used to encode values (or potentially incomplete values) in a
-compact form. This can be straightforwardly seen in the following
-coding function from values to bitcodes:
-
-\begin{center}
-\begin{tabular}{lcl}
- $\textit{code}(\Empty)$ & $\dn$ & $[]$\\
- $\textit{code}(\Char\,c)$ & $\dn$ & $[]$\\
- $\textit{code}(\Left\,v)$ & $\dn$ & $0 :: code(v)$\\
- $\textit{code}(\Right\,v)$ & $\dn$ & $1 :: code(v)$\\
- $\textit{code}(\Seq\,v_1\,v_2)$ & $\dn$ & $code(v_1) \,@\, code(v_2)$\\
- $\textit{code}(\Stars\,[])$ & $\dn$ & $[0]$\\
- $\textit{code}(\Stars\,(v\!::\!vs))$ & $\dn$ & $1 :: code(v) \;@\;
- code(\Stars\,vs)$
-\end{tabular}
-\end{center}
-
-\noindent
-Here $\textit{code}$ encodes a value into a bitcodes by converting
-$\Left$ into $0$, $\Right$ into $1$, and marks the start of a non-empty
-star iteration by $1$. The border where a local star terminates
-is marked by $0$. This coding is lossy, as it throws away the information about
-characters, and also does not encode the ``boundary'' between two
-sequence values. Moreover, with only the bitcode we cannot even tell
-whether the $1$s and $0$s are for $\Left/\Right$ or $\Stars$. The
-reason for choosing this compact way of storing information is that the
-relatively small size of bits can be easily manipulated and ``moved
-around'' in a regular expression. In order to recover values, we will
-need the corresponding regular expression as an extra information. This
-means the decoding function is defined as:
-
-
-%\begin{definition}[Bitdecoding of Values]\mbox{}
-\begin{center}
-\begin{tabular}{@{}l@{\hspace{1mm}}c@{\hspace{1mm}}l@{}}
- $\textit{decode}'\,bs\,(\ONE)$ & $\dn$ & $(\Empty, bs)$\\
- $\textit{decode}'\,bs\,(c)$ & $\dn$ & $(\Char\,c, bs)$\\
- $\textit{decode}'\,(0\!::\!bs)\;(r_1 + r_2)$ & $\dn$ &
- $\textit{let}\,(v, bs_1) = \textit{decode}'\,bs\,r_1\;\textit{in}\;
- (\Left\,v, bs_1)$\\
- $\textit{decode}'\,(1\!::\!bs)\;(r_1 + r_2)$ & $\dn$ &
- $\textit{let}\,(v, bs_1) = \textit{decode}'\,bs\,r_2\;\textit{in}\;
- (\Right\,v, bs_1)$\\
- $\textit{decode}'\,bs\;(r_1\cdot r_2)$ & $\dn$ &
- $\textit{let}\,(v_1, bs_1) = \textit{decode}'\,bs\,r_1\;\textit{in}$\\
- & & $\textit{let}\,(v_2, bs_2) = \textit{decode}'\,bs_1\,r_2$\\
- & & \hspace{35mm}$\textit{in}\;(\Seq\,v_1\,v_2, bs_2)$\\
- $\textit{decode}'\,(0\!::\!bs)\,(r^*)$ & $\dn$ & $(\Stars\,[], bs)$\\
- $\textit{decode}'\,(1\!::\!bs)\,(r^*)$ & $\dn$ &
- $\textit{let}\,(v, bs_1) = \textit{decode}'\,bs\,r\;\textit{in}$\\
- & & $\textit{let}\,(\Stars\,vs, bs_2) = \textit{decode}'\,bs_1\,r^*$\\
- & & \hspace{35mm}$\textit{in}\;(\Stars\,v\!::\!vs, bs_2)$\bigskip\\
-
- $\textit{decode}\,bs\,r$ & $\dn$ &
- $\textit{let}\,(v, bs') = \textit{decode}'\,bs\,r\;\textit{in}$\\
- & & $\textit{if}\;bs' = []\;\textit{then}\;\textit{Some}\,v\;
- \textit{else}\;\textit{None}$
-\end{tabular}
-\end{center}
-%\end{definition}
-
-Sulzmann and Lu's integrated the bitcodes into regular expressions to
-create annotated regular expressions \cite{Sulzmann2014}.
-\emph{Annotated regular expressions} are defined by the following
-grammar:%\comment{ALTS should have an $as$ in the definitions, not just $a_1$ and $a_2$}
-
-\begin{center}
-\begin{tabular}{lcl}
- $\textit{a}$ & $::=$ & $\ZERO$\\
- & $\mid$ & $_{bs}\ONE$\\
- & $\mid$ & $_{bs}{\bf c}$\\
- & $\mid$ & $_{bs}\sum\,as$\\
- & $\mid$ & $_{bs}a_1\cdot a_2$\\
- & $\mid$ & $_{bs}a^*$
-\end{tabular}
-\end{center}
-%(in \textit{ALTS})
-
-\noindent
-where $bs$ stands for bitcodes, $a$ for $\mathbf{a}$nnotated regular
-expressions and $as$ for a list of annotated regular expressions.
-The alternative constructor($\sum$) has been generalized to
-accept a list of annotated regular expressions rather than just 2.
-We will show that these bitcodes encode information about
-the (POSIX) value that should be generated by the Sulzmann and Lu
-algorithm.
-
-
-To do lexing using annotated regular expressions, we shall first
-transform the usual (un-annotated) regular expressions into annotated
-regular expressions. This operation is called \emph{internalisation} and
-defined as follows:
-
-%\begin{definition}
-\begin{center}
-\begin{tabular}{lcl}
- $(\ZERO)^\uparrow$ & $\dn$ & $\ZERO$\\
- $(\ONE)^\uparrow$ & $\dn$ & $_{[]}\ONE$\\
- $(c)^\uparrow$ & $\dn$ & $_{[]}{\bf c}$\\
- $(r_1 + r_2)^\uparrow$ & $\dn$ &
- $_{[]}\sum[\textit{fuse}\,[0]\,r_1^\uparrow,\,
- \textit{fuse}\,[1]\,r_2^\uparrow]$\\
- $(r_1\cdot r_2)^\uparrow$ & $\dn$ &
- $_{[]}r_1^\uparrow \cdot r_2^\uparrow$\\
- $(r^*)^\uparrow$ & $\dn$ &
- $_{[]}(r^\uparrow)^*$\\
-\end{tabular}
-\end{center}
-%\end{definition}
-
-\noindent
-We use up arrows here to indicate that the basic un-annotated regular
-expressions are ``lifted up'' into something slightly more complex. In the
-fourth clause, $\textit{fuse}$ is an auxiliary function that helps to
-attach bits to the front of an annotated regular expression. Its
-definition is as follows:
-
-\begin{center}
-\begin{tabular}{lcl}
- $\textit{fuse}\;bs \; \ZERO$ & $\dn$ & $\ZERO$\\
- $\textit{fuse}\;bs\; _{bs'}\ONE$ & $\dn$ &
- $_{bs @ bs'}\ONE$\\
- $\textit{fuse}\;bs\;_{bs'}{\bf c}$ & $\dn$ &
- $_{bs@bs'}{\bf c}$\\
- $\textit{fuse}\;bs\,_{bs'}\sum\textit{as}$ & $\dn$ &
- $_{bs@bs'}\sum\textit{as}$\\
- $\textit{fuse}\;bs\; _{bs'}a_1\cdot a_2$ & $\dn$ &
- $_{bs@bs'}a_1 \cdot a_2$\\
- $\textit{fuse}\;bs\,_{bs'}a^*$ & $\dn$ &
- $_{bs @ bs'}a^*$
-\end{tabular}
-\end{center}
-
-\noindent
-After internalising the regular expression, we perform successive
-derivative operations on the annotated regular expressions. This
-derivative operation is the same as what we had previously for the
-basic regular expressions, except that we beed to take care of
-the bitcodes:
-
-
-\iffalse
- %\begin{definition}{bder}
-\begin{center}
- \begin{tabular}{@{}lcl@{}}
- $(\textit{ZERO})\,\backslash c$ & $\dn$ & $\textit{ZERO}$\\
- $(\textit{ONE}\;bs)\,\backslash c$ & $\dn$ & $\textit{ZERO}$\\
- $(\textit{CHAR}\;bs\,d)\,\backslash c$ & $\dn$ &
- $\textit{if}\;c=d\; \;\textit{then}\;
- \textit{ONE}\;bs\;\textit{else}\;\textit{ZERO}$\\
- $(\textit{ALTS}\;bs\,as)\,\backslash c$ & $\dn$ &
- $\textit{ALTS}\;bs\,(as.map(\backslash c))$\\
- $(\textit{SEQ}\;bs\,a_1\,a_2)\,\backslash c$ & $\dn$ &
- $\textit{if}\;\textit{bnullable}\,a_1$\\
- & &$\textit{then}\;\textit{ALTS}\,bs\,List((\textit{SEQ}\,[]\,(a_1\,\backslash c)\,a_2),$\\
- & &$\phantom{\textit{then}\;\textit{ALTS}\,bs\,}(\textit{fuse}\,(\textit{bmkeps}\,a_1)\,(a_2\,\backslash c)))$\\
- & &$\textit{else}\;\textit{SEQ}\,bs\,(a_1\,\backslash c)\,a_2$\\
- $(\textit{STAR}\,bs\,a)\,\backslash c$ & $\dn$ &
- $\textit{SEQ}\;bs\,(\textit{fuse}\, [\Z] (r\,\backslash c))\,
- (\textit{STAR}\,[]\,r)$
-\end{tabular}
-\end{center}
-%\end{definition}
-
-\begin{center}
- \begin{tabular}{@{}lcl@{}}
- $(\textit{ZERO})\,\backslash c$ & $\dn$ & $\textit{ZERO}$\\
- $(_{bs}\textit{ONE})\,\backslash c$ & $\dn$ & $\textit{ZERO}$\\
- $(_{bs}\textit{CHAR}\;d)\,\backslash c$ & $\dn$ &
- $\textit{if}\;c=d\; \;\textit{then}\;
- _{bs}\textit{ONE}\;\textit{else}\;\textit{ZERO}$\\
- $(_{bs}\textit{ALTS}\;\textit{as})\,\backslash c$ & $\dn$ &
- $_{bs}\textit{ALTS}\;(\textit{as}.\textit{map}(\backslash c))$\\
- $(_{bs}\textit{SEQ}\;a_1\,a_2)\,\backslash c$ & $\dn$ &
- $\textit{if}\;\textit{bnullable}\,a_1$\\
- & &$\textit{then}\;_{bs}\textit{ALTS}\,List((_{[]}\textit{SEQ}\,(a_1\,\backslash c)\,a_2),$\\
- & &$\phantom{\textit{then}\;_{bs}\textit{ALTS}\,}(\textit{fuse}\,(\textit{bmkeps}\,a_1)\,(a_2\,\backslash c)))$\\
- & &$\textit{else}\;_{bs}\textit{SEQ}\,(a_1\,\backslash c)\,a_2$\\
- $(_{bs}\textit{STAR}\,a)\,\backslash c$ & $\dn$ &
- $_{bs}\textit{SEQ}\;(\textit{fuse}\, [0] \; r\,\backslash c )\,
- (_{bs}\textit{STAR}\,[]\,r)$
-\end{tabular}
-\end{center}
-%\end{definition}
-\fi
-
-\begin{center}
- \begin{tabular}{@{}lcl@{}}
- $(\ZERO)\,\backslash c$ & $\dn$ & $\ZERO$\\
- $(_{bs}\ONE)\,\backslash c$ & $\dn$ & $\ZERO$\\
- $(_{bs}{\bf d})\,\backslash c$ & $\dn$ &
- $\textit{if}\;c=d\; \;\textit{then}\;
- _{bs}\ONE\;\textit{else}\;\ZERO$\\
- $(_{bs}\sum \;\textit{as})\,\backslash c$ & $\dn$ &
- $_{bs}\sum\;(\textit{as.map}(\backslash c))$\\
- $(_{bs}\;a_1\cdot a_2)\,\backslash c$ & $\dn$ &
- $\textit{if}\;\textit{bnullable}\,a_1$\\
- & &$\textit{then}\;_{bs}\sum\,[(_{[]}\,(a_1\,\backslash c)\cdot\,a_2),$\\
- & &$\phantom{\textit{then},\;_{bs}\sum\,}(\textit{fuse}\,(\textit{bmkeps}\,a_1)\,(a_2\,\backslash c))]$\\
- & &$\textit{else}\;_{bs}\,(a_1\,\backslash c)\cdot a_2$\\
- $(_{bs}a^*)\,\backslash c$ & $\dn$ &
- $_{bs}(\textit{fuse}\, [0] \; r\,\backslash c)\cdot
- (_{[]}r^*))$
-\end{tabular}
-\end{center}
-
-%\end{definition}
-\noindent
-For instance, when we do derivative of $_{bs}a^*$ with respect to c,
-we need to unfold it into a sequence,
-and attach an additional bit $0$ to the front of $r \backslash c$
-to indicate that there is one more star iteration. Also the sequence clause
-is more subtle---when $a_1$ is $\textit{bnullable}$ (here
-\textit{bnullable} is exactly the same as $\textit{nullable}$, except
-that it is for annotated regular expressions, therefore we omit the
-definition). Assume that $\textit{bmkeps}$ correctly extracts the bitcode for how
-$a_1$ matches the string prior to character $c$ (more on this later),
-then the right branch of alternative, which is $\textit{fuse} \; \bmkeps \; a_1 (a_2
-\backslash c)$ will collapse the regular expression $a_1$(as it has
-already been fully matched) and store the parsing information at the
-head of the regular expression $a_2 \backslash c$ by fusing to it. The
-bitsequence $\textit{bs}$, which was initially attached to the
-first element of the sequence $a_1 \cdot a_2$, has
-now been elevated to the top-level of $\sum$, as this information will be
-needed whichever way the sequence is matched---no matter whether $c$ belongs
-to $a_1$ or $ a_2$. After building these derivatives and maintaining all
-the lexing information, we complete the lexing by collecting the
-bitcodes using a generalised version of the $\textit{mkeps}$ function
-for annotated regular expressions, called $\textit{bmkeps}$:
-
-
-%\begin{definition}[\textit{bmkeps}]\mbox{}
-\begin{center}
-\begin{tabular}{lcl}
- $\textit{bmkeps}\,(_{bs}\ONE)$ & $\dn$ & $bs$\\
- $\textit{bmkeps}\,(_{bs}\sum a::\textit{as})$ & $\dn$ &
- $\textit{if}\;\textit{bnullable}\,a$\\
- & &$\textit{then}\;bs\,@\,\textit{bmkeps}\,a$\\
- & &$\textit{else}\;bs\,@\,\textit{bmkeps}\,(_{bs}\sum \textit{as})$\\
- $\textit{bmkeps}\,(_{bs} a_1 \cdot a_2)$ & $\dn$ &
- $bs \,@\,\textit{bmkeps}\,a_1\,@\, \textit{bmkeps}\,a_2$\\
- $\textit{bmkeps}\,(_{bs}a^*)$ & $\dn$ &
- $bs \,@\, [0]$
-\end{tabular}
-\end{center}
-%\end{definition}
-
-\noindent
-This function completes the value information by travelling along the
-path of the regular expression that corresponds to a POSIX value and
-collecting all the bitcodes, and using $S$ to indicate the end of star
-iterations. If we take the bitcodes produced by $\textit{bmkeps}$ and
-decode them, we get the value we expect. The corresponding lexing
-algorithm looks as follows:
-
-\begin{center}
-\begin{tabular}{lcl}
- $\textit{blexer}\;r\,s$ & $\dn$ &
- $\textit{let}\;a = (r^\uparrow)\backslash s\;\textit{in}$\\
- & & $\;\;\textit{if}\; \textit{bnullable}(a)$\\
- & & $\;\;\textit{then}\;\textit{decode}\,(\textit{bmkeps}\,a)\,r$\\
- & & $\;\;\textit{else}\;\textit{None}$
-\end{tabular}
-\end{center}
-
-\noindent
-In this definition $\_\backslash s$ is the generalisation of the derivative
-operation from characters to strings (just like the derivatives for un-annotated
-regular expressions).
-
-Remember tha one of the important reasons we introduced bitcodes
-is that they can make simplification more structured and therefore guaranteeing
-the correctness.
-
-\subsection*{Our Simplification Rules}
-
-In this section we introduce aggressive (in terms of size) simplification rules
-on annotated regular expressions
-in order to keep derivatives small. Such simplifications are promising
-as we have
-generated test data that show
-that a good tight bound can be achieved. Obviously we could only
-partially cover the search space as there are infinitely many regular
-expressions and strings.
-
-One modification we introduced is to allow a list of annotated regular
-expressions in the $\sum$ constructor. This allows us to not just
-delete unnecessary $\ZERO$s and $\ONE$s from regular expressions, but
-also unnecessary ``copies'' of regular expressions (very similar to
-simplifying $r + r$ to just $r$, but in a more general setting). Another
-modification is that we use simplification rules inspired by Antimirov's
-work on partial derivatives. They maintain the idea that only the first
-``copy'' of a regular expression in an alternative contributes to the
-calculation of a POSIX value. All subsequent copies can be pruned away from
-the regular expression. A recursive definition of our simplification function
-that looks somewhat similar to our Scala code is given below:
-%\comment{Use $\ZERO$, $\ONE$ and so on.
-%Is it $ALTS$ or $ALTS$?}\\
-
-\begin{center}
- \begin{tabular}{@{}lcl@{}}
-
- $\textit{simp} \; (_{bs}a_1\cdot a_2)$ & $\dn$ & $ (\textit{simp} \; a_1, \textit{simp} \; a_2) \; \textit{match} $ \\
- &&$\quad\textit{case} \; (\ZERO, \_) \Rightarrow \ZERO$ \\
- &&$\quad\textit{case} \; (\_, \ZERO) \Rightarrow \ZERO$ \\
- &&$\quad\textit{case} \; (\ONE, a_2') \Rightarrow \textit{fuse} \; bs \; a_2'$ \\
- &&$\quad\textit{case} \; (a_1', \ONE) \Rightarrow \textit{fuse} \; bs \; a_1'$ \\
- &&$\quad\textit{case} \; (a_1', a_2') \Rightarrow _{bs}a_1' \cdot a_2'$ \\
-
- $\textit{simp} \; (_{bs}\sum \textit{as})$ & $\dn$ & $\textit{distinct}( \textit{flatten} ( \textit{as.map(simp)})) \; \textit{match} $ \\
- &&$\quad\textit{case} \; [] \Rightarrow \ZERO$ \\
- &&$\quad\textit{case} \; a :: [] \Rightarrow \textit{fuse bs a}$ \\
- &&$\quad\textit{case} \; as' \Rightarrow _{bs}\sum \textit{as'}$\\
-
- $\textit{simp} \; a$ & $\dn$ & $\textit{a} \qquad \textit{otherwise}$
-\end{tabular}
-\end{center}
-
-\noindent
-The simplification does a pattern matching on the regular expression.
-When it detected that the regular expression is an alternative or
-sequence, it will try to simplify its children regular expressions
-recursively and then see if one of the children turn into $\ZERO$ or
-$\ONE$, which might trigger further simplification at the current level.
-The most involved part is the $\sum$ clause, where we use two
-auxiliary functions $\textit{flatten}$ and $\textit{distinct}$ to open up nested
-alternatives and reduce as many duplicates as possible. Function
-$\textit{distinct}$ keeps the first occurring copy only and remove all later ones
-when detected duplicates. Function $\textit{flatten}$ opens up nested $\sum$s.
-Its recursive definition is given below:
-
- \begin{center}
- \begin{tabular}{@{}lcl@{}}
- $\textit{flatten} \; (_{bs}\sum \textit{as}) :: \textit{as'}$ & $\dn$ & $(\textit{map} \;
- (\textit{fuse}\;bs)\; \textit{as}) \; @ \; \textit{flatten} \; as' $ \\
- $\textit{flatten} \; \ZERO :: as'$ & $\dn$ & $ \textit{flatten} \; \textit{as'} $ \\
- $\textit{flatten} \; a :: as'$ & $\dn$ & $a :: \textit{flatten} \; \textit{as'}$ \quad(otherwise)
-\end{tabular}
-\end{center}
-
-\noindent
-Here $\textit{flatten}$ behaves like the traditional functional programming flatten
-function, except that it also removes $\ZERO$s. Or in terms of regular expressions, it
-removes parentheses, for example changing $a+(b+c)$ into $a+b+c$.
-
-Having defined the $\simp$ function,
-we can use the previous notation of natural
-extension from derivative w.r.t.~character to derivative
-w.r.t.~string:%\comment{simp in the [] case?}
-
-\begin{center}
-\begin{tabular}{lcl}
-$r \backslash_{simp} (c\!::\!s) $ & $\dn$ & $(r \backslash_{simp}\, c) \backslash_{simp}\, s$ \\
-$r \backslash_{simp} [\,] $ & $\dn$ & $r$
-\end{tabular}
-\end{center}
-
-\noindent
-to obtain an optimised version of the algorithm:
-
- \begin{center}
-\begin{tabular}{lcl}
- $\textit{blexer\_simp}\;r\,s$ & $\dn$ &
- $\textit{let}\;a = (r^\uparrow)\backslash_{simp}\, s\;\textit{in}$\\
- & & $\;\;\textit{if}\; \textit{bnullable}(a)$\\
- & & $\;\;\textit{then}\;\textit{decode}\,(\textit{bmkeps}\,a)\,r$\\
- & & $\;\;\textit{else}\;\textit{None}$
-\end{tabular}
-\end{center}
-
-\noindent
-This algorithm keeps the regular expression size small, for example,
-with this simplification our previous $(a + aa)^*$ example's 8000 nodes
-will be reduced to just 6 and stays constant, no matter how long the
-input string is.
-
-
-
-Derivatives give a simple solution
-to the problem of matching a string $s$ with a regular
-expression $r$: if the derivative of $r$ w.r.t.\ (in
-succession) all the characters of the string matches the empty string,
-then $r$ matches $s$ (and {\em vice versa}).
-
-
-
-However, there are two difficulties with derivative-based matchers:
-First, Brzozowski's original matcher only generates a yes/no answer
-for whether a regular expression matches a string or not. This is too
-little information in the context of lexing where separate tokens must
-be identified and also classified (for example as keywords
-or identifiers). Sulzmann and Lu~\cite{Sulzmann2014} overcome this
-difficulty by cleverly extending Brzozowski's matching
-algorithm. Their extended version generates additional information on
-\emph{how} a regular expression matches a string following the POSIX
-rules for regular expression matching. They achieve this by adding a
-second ``phase'' to Brzozowski's algorithm involving an injection
-function. In our own earlier work we provided the formal
-specification of what POSIX matching means and proved in Isabelle/HOL
-the correctness
-of Sulzmann and Lu's extended algorithm accordingly
-\cite{AusafDyckhoffUrban2016}.
-
-The second difficulty is that Brzozowski's derivatives can
-grow to arbitrarily big sizes. For example if we start with the
-regular expression $(a+aa)^*$ and take
-successive derivatives according to the character $a$, we end up with
-a sequence of ever-growing derivatives like
-
-\def\ll{\stackrel{\_\backslash{} a}{\longrightarrow}}
-\begin{center}
-\begin{tabular}{rll}
-$(a + aa)^*$ & $\ll$ & $(\ONE + \ONE{}a) \cdot (a + aa)^*$\\
-& $\ll$ & $(\ZERO + \ZERO{}a + \ONE) \cdot (a + aa)^* \;+\; (\ONE + \ONE{}a) \cdot (a + aa)^*$\\
-& $\ll$ & $(\ZERO + \ZERO{}a + \ZERO) \cdot (a + aa)^* + (\ONE + \ONE{}a) \cdot (a + aa)^* \;+\; $\\
-& & $\qquad(\ZERO + \ZERO{}a + \ONE) \cdot (a + aa)^* + (\ONE + \ONE{}a) \cdot (a + aa)^*$\\
-& $\ll$ & \ldots \hspace{15mm}(regular expressions of sizes 98, 169, 283, 468, 767, \ldots)
-\end{tabular}
-\end{center}
-
-\noindent where after around 35 steps we run out of memory on a
-typical computer (we shall define shortly the precise details of our
-regular expressions and the derivative operation). Clearly, the
-notation involving $\ZERO$s and $\ONE$s already suggests
-simplification rules that can be applied to regular regular
-expressions, for example $\ZERO{}\,r \Rightarrow \ZERO$, $\ONE{}\,r
-\Rightarrow r$, $\ZERO{} + r \Rightarrow r$ and $r + r \Rightarrow
-r$. While such simple-minded simplifications have been proved in our
-earlier work to preserve the correctness of Sulzmann and Lu's
-algorithm \cite{AusafDyckhoffUrban2016}, they unfortunately do
-\emph{not} help with limiting the growth of the derivatives shown
-above: the growth is slowed, but the derivatives can still grow rather
-quickly beyond any finite bound.
-
-
-Sulzmann and Lu overcome this ``growth problem'' in a second algorithm
-\cite{Sulzmann2014} where they introduce bitcoded
-regular expressions. In this version, POSIX values are
-represented as bitsequences and such sequences are incrementally generated
-when derivatives are calculated. The compact representation
-of bitsequences and regular expressions allows them to define a more
-``aggressive'' simplification method that keeps the size of the
-derivatives finite no matter what the length of the string is.
-They make some informal claims about the correctness and linear behaviour
-of this version, but do not provide any supporting proof arguments, not
-even ``pencil-and-paper'' arguments. They write about their bitcoded
-\emph{incremental parsing method} (that is the algorithm to be formalised
-in this paper):
-
-
-\begin{quote}\it
- ``Correctness Claim: We further claim that the incremental parsing
- method [..] in combination with the simplification steps [..]
- yields POSIX parse trees. We have tested this claim
- extensively [..] but yet
- have to work out all proof details.'' \cite[Page 14]{Sulzmann2014}
-\end{quote}
-
-
-
-
-\section{Backgound}
-%Regular expression matching and lexing has been
-% widely-used and well-implemented
-%in software industry.
-%TODO: expand the above into a full paragraph
-%TODO: look up snort rules to use here--give readers idea of what regexes look like
-
-
-Theoretical results say that regular expression matching
-should be linear with respect to the input.
-Under a certain class of regular expressions and inputs though,
-practical implementations suffer from non-linear or even
-exponential running time,
-allowing a ReDoS (regular expression denial-of-service ) attack.
-
-
-%----------------------------------------------------------------------------------------
-
-\section{Engineering and Academic Approaches to Deal with Catastrophic Backtracking}
-
-The reason behind is that regex libraries in popular language engines
- often want to support richer constructs
-than the most basic regular expressions, and lexing rather than matching
-is needed for sub-match extraction.
-
-There is also static analysis work on regular expression that
-have potential expoential behavious. Rathnayake and Thielecke
-\parencite{Rathnayake2014StaticAF} proposed an algorithm
-that detects regular expressions triggering exponential
-behavious on backtracking matchers.
-People also developed static analysis methods for
-generating non-linear polynomial worst-time estimates
-for regexes, attack string that exploit the worst-time
-scenario, and "attack automata" that generates
-attack strings.
-For a comprehensive analysis, please refer to Weideman's thesis
-\parencite{Weideman2017Static}.
-
-\subsection{DFA Approach}
-
-Exponential states.
-
-\subsection{NFA Approach}
-Backtracking.
-
-
-
-%----------------------------------------------------------------------------------------
-
-\section{Our Approach}
-In the last fifteen or so years, Brzozowski's derivatives of regular
-expressions have sparked quite a bit of interest in the functional
-programming and theorem prover communities. The beauty of
-Brzozowski's derivatives \parencite{Brzozowski1964} is that they are neatly
-expressible in any functional language, and easily definable and
-reasoned about in theorem provers---the definitions just consist of
-inductive datatypes and simple recursive functions. Derivatives of a
-regular expression, written $r \backslash c$, give a simple solution
-to the problem of matching a string $s$ with a regular
-expression $r$: if the derivative of $r$ w.r.t.\ (in
-succession) all the characters of the string matches the empty string,
-then $r$ matches $s$ (and {\em vice versa}).
-
-
-This work aims to address the above vulnerability by the combination
-of Brzozowski's derivatives and interactive theorem proving. We give an
-improved version of Sulzmann and Lu's bit-coded algorithm using
-derivatives, which come with a formal guarantee in terms of correctness and
-running time as an Isabelle/HOL proof.
-Then we improve the algorithm with an even stronger version of
-simplification, and prove a time bound linear to input and
-cubic to regular expression size using a technique by
-Antimirov.
-
-\subsection{Existing Work}
-We are aware
-of a mechanised correctness proof of Brzozowski's derivative-based matcher in HOL4 by
-Owens and Slind~\parencite{Owens2008}. Another one in Isabelle/HOL is part
-of the work by Krauss and Nipkow \parencite{Krauss2011}. And another one
-in Coq is given by Coquand and Siles \parencite{Coquand2012}.
-Also Ribeiro and Du Bois give one in Agda \parencite{RibeiroAgda2017}.
-
-%----------------------------------------------------------------------------------------
-
-\section{What this Template Includes}
-
-\subsection{Folders}
-
-This template comes as a single zip file that expands out to several files and folders. The folder names are mostly self-explanatory:
-
-\keyword{Appendices} -- this is the folder where you put the appendices. Each appendix should go into its own separate \file{.tex} file. An example and template are included in the directory.
-
-\keyword{Chapters} -- this is the folder where you put the thesis chapters. A thesis usually has about six chapters, though there is no hard rule on this. Each chapter should go in its own separate \file{.tex} file and they can be split as:
-\begin{itemize}
-\item Chapter 1: Introduction to the thesis topic
-\item Chapter 2: Background information and theory
-\item Chapter 3: (Laboratory) experimental setup
-\item Chapter 4: Details of experiment 1
-\item Chapter 5: Details of experiment 2
-\item Chapter 6: Discussion of the experimental results
-\item Chapter 7: Conclusion and future directions
-\end{itemize}
-This chapter layout is specialised for the experimental sciences, your discipline may be different.
-
-\keyword{Figures} -- this folder contains all figures for the thesis. These are the final images that will go into the thesis document.
-
-\subsection{Files}
-
-Included are also several files, most of them are plain text and you can see their contents in a text editor. After initial compilation, you will see that more auxiliary files are created by \LaTeX{} or BibTeX and which you don't need to delete or worry about:
-
-\keyword{example.bib} -- this is an important file that contains all the bibliographic information and references that you will be citing in the thesis for use with BibTeX. You can write it manually, but there are reference manager programs available that will create and manage it for you. Bibliographies in \LaTeX{} are a large subject and you may need to read about BibTeX before starting with this. Many modern reference managers will allow you to export your references in BibTeX format which greatly eases the amount of work you have to do.
-
-\keyword{MastersDoctoralThesis.cls} -- this is an important file. It is the class file that tells \LaTeX{} how to format the thesis.
-
-\keyword{main.pdf} -- this is your beautifully typeset thesis (in the PDF file format) created by \LaTeX{}. It is supplied in the PDF with the template and after you compile the template you should get an identical version.
-
-\keyword{main.tex} -- this is an important file. This is the file that you tell \LaTeX{} to compile to produce your thesis as a PDF file. It contains the framework and constructs that tell \LaTeX{} how to layout the thesis. It is heavily commented so you can read exactly what each line of code does and why it is there. After you put your own information into the \emph{THESIS INFORMATION} block -- you have now started your thesis!
-
-Files that are \emph{not} included, but are created by \LaTeX{} as auxiliary files include:
-
-\keyword{main.aux} -- this is an auxiliary file generated by \LaTeX{}, if it is deleted \LaTeX{} simply regenerates it when you run the main \file{.tex} file.
-
-\keyword{main.bbl} -- this is an auxiliary file generated by BibTeX, if it is deleted, BibTeX simply regenerates it when you run the \file{main.aux} file. Whereas the \file{.bib} file contains all the references you have, this \file{.bbl} file contains the references you have actually cited in the thesis and is used to build the bibliography section of the thesis.
-
-\keyword{main.blg} -- this is an auxiliary file generated by BibTeX, if it is deleted BibTeX simply regenerates it when you run the main \file{.aux} file.
-
-\keyword{main.lof} -- this is an auxiliary file generated by \LaTeX{}, if it is deleted \LaTeX{} simply regenerates it when you run the main \file{.tex} file. It tells \LaTeX{} how to build the \emph{List of Figures} section.
-
-\keyword{main.log} -- this is an auxiliary file generated by \LaTeX{}, if it is deleted \LaTeX{} simply regenerates it when you run the main \file{.tex} file. It contains messages from \LaTeX{}, if you receive errors and warnings from \LaTeX{}, they will be in this \file{.log} file.
-
-\keyword{main.lot} -- this is an auxiliary file generated by \LaTeX{}, if it is deleted \LaTeX{} simply regenerates it when you run the main \file{.tex} file. It tells \LaTeX{} how to build the \emph{List of Tables} section.
-
-\keyword{main.out} -- this is an auxiliary file generated by \LaTeX{}, if it is deleted \LaTeX{} simply regenerates it when you run the main \file{.tex} file.
-
-So from this long list, only the files with the \file{.bib}, \file{.cls} and \file{.tex} extensions are the most important ones. The other auxiliary files can be ignored or deleted as \LaTeX{} and BibTeX will regenerate them.
-
-%----------------------------------------------------------------------------------------
-
-\section{Filling in Your Information in the \file{main.tex} File}\label{FillingFile}
-
-You will need to personalise the thesis template and make it your own by filling in your own information. This is done by editing the \file{main.tex} file in a text editor or your favourite LaTeX environment.
-
-Open the file and scroll down to the third large block titled \emph{THESIS INFORMATION} where you can see the entries for \emph{University Name}, \emph{Department Name}, etc \ldots
-
-Fill out the information about yourself, your group and institution. You can also insert web links, if you do, make sure you use the full URL, including the \code{http://} for this. If you don't want these to be linked, simply remove the \verb|\href{url}{name}| and only leave the name.
-
-When you have done this, save the file and recompile \code{main.tex}. All the information you filled in should now be in the PDF, complete with web links. You can now begin your thesis proper!
-
-%----------------------------------------------------------------------------------------
-
-\section{The \code{main.tex} File Explained}
-
-The \file{main.tex} file contains the structure of the thesis. There are plenty of written comments that explain what pages, sections and formatting the \LaTeX{} code is creating. Each major document element is divided into commented blocks with titles in all capitals to make it obvious what the following bit of code is doing. Initially there seems to be a lot of \LaTeX{} code, but this is all formatting, and it has all been taken care of so you don't have to do it.
-
-Begin by checking that your information on the title page is correct. For the thesis declaration, your institution may insist on something different than the text given. If this is the case, just replace what you see with what is required in the \emph{DECLARATION PAGE} block.
-
-Then comes a page which contains a funny quote. You can put your own, or quote your favourite scientist, author, person, and so on. Make sure to put the name of the person who you took the quote from.
-
-Following this is the abstract page which summarises your work in a condensed way and can almost be used as a standalone document to describe what you have done. The text you write will cause the heading to move up so don't worry about running out of space.
-
-Next come the acknowledgements. On this page, write about all the people who you wish to thank (not forgetting parents, partners and your advisor/supervisor).
-
-The contents pages, list of figures and tables are all taken care of for you and do not need to be manually created or edited. The next set of pages are more likely to be optional and can be deleted since they are for a more technical thesis: insert a list of abbreviations you have used in the thesis, then a list of the physical constants and numbers you refer to and finally, a list of mathematical symbols used in any formulae. Making the effort to fill these tables means the reader has a one-stop place to refer to instead of searching the internet and references to try and find out what you meant by certain abbreviations or symbols.
-
-The list of symbols is split into the Roman and Greek alphabets. Whereas the abbreviations and symbols ought to be listed in alphabetical order (and this is \emph{not} done automatically for you) the list of physical constants should be grouped into similar themes.
-
-The next page contains a one line dedication. Who will you dedicate your thesis to?
-
-Finally, there is the block where the chapters are included. Uncomment the lines (delete the \code{\%} character) as you write the chapters. Each chapter should be written in its own file and put into the \emph{Chapters} folder and named \file{Chapter1}, \file{Chapter2}, etc\ldots Similarly for the appendices, uncomment the lines as you need them. Each appendix should go into its own file and placed in the \emph{Appendices} folder.
-
-After the preamble, chapters and appendices finally comes the bibliography. The bibliography style (called \option{authoryear}) is used for the bibliography and is a fully featured style that will even include links to where the referenced paper can be found online. Do not underestimate how grateful your reader will be to find that a reference to a paper is just a click away. Of course, this relies on you putting the URL information into the BibTeX file in the first place.
-
-%----------------------------------------------------------------------------------------
-
-\section{Thesis Features and Conventions}\label{ThesisConventions}
-
-To get the best out of this template, there are a few conventions that you may want to follow.
-
-One of the most important (and most difficult) things to keep track of in such a long document as a thesis is consistency. Using certain conventions and ways of doing things (such as using a Todo list) makes the job easier. Of course, all of these are optional and you can adopt your own method.
-
-\subsection{Printing Format}
-
-This thesis template is designed for double sided printing (i.e. content on the front and back of pages) as most theses are printed and bound this way. Switching to one sided printing is as simple as uncommenting the \option{oneside} option of the \code{documentclass} command at the top of the \file{main.tex} file. You may then wish to adjust the margins to suit specifications from your institution.
-
-The headers for the pages contain the page number on the outer side (so it is easy to flick through to the page you want) and the chapter name on the inner side.
-
-The text is set to 11 point by default with single line spacing, again, you can tune the text size and spacing should you want or need to using the options at the very start of \file{main.tex}. The spacing can be changed similarly by replacing the \option{singlespacing} with \option{onehalfspacing} or \option{doublespacing}.
-
-\subsection{Using US Letter Paper}
-
-The paper size used in the template is A4, which is the standard size in Europe. If you are using this thesis template elsewhere and particularly in the United States, then you may have to change the A4 paper size to the US Letter size. This can be done in the margins settings section in \file{main.tex}.
-
-Due to the differences in the paper size, the resulting margins may be different to what you like or require (as it is common for institutions to dictate certain margin sizes). If this is the case, then the margin sizes can be tweaked by modifying the values in the same block as where you set the paper size. Now your document should be set up for US Letter paper size with suitable margins.
-
-\subsection{References}
-
-The \code{biblatex} package is used to format the bibliography and inserts references such as this one \parencite{Reference1}. The options used in the \file{main.tex} file mean that the in-text citations of references are formatted with the author(s) listed with the date of the publication. Multiple references are separated by semicolons (e.g. \parencite{Reference2, Reference1}) and references with more than three authors only show the first author with \emph{et al.} indicating there are more authors (e.g. \parencite{Reference3}). This is done automatically for you. To see how you use references, have a look at the \file{Chapter1.tex} source file. Many reference managers allow you to simply drag the reference into the document as you type.
-
-Scientific references should come \emph{before} the punctuation mark if there is one (such as a comma or period). The same goes for footnotes\footnote{Such as this footnote, here down at the bottom of the page.}. You can change this but the most important thing is to keep the convention consistent throughout the thesis. Footnotes themselves should be full, descriptive sentences (beginning with a capital letter and ending with a full stop). The APA6 states: \enquote{Footnote numbers should be superscripted, [...], following any punctuation mark except a dash.} The Chicago manual of style states: \enquote{A note number should be placed at the end of a sentence or clause. The number follows any punctuation mark except the dash, which it precedes. It follows a closing parenthesis.}
-
-The bibliography is typeset with references listed in alphabetical order by the first author's last name. This is similar to the APA referencing style. To see how \LaTeX{} typesets the bibliography, have a look at the very end of this document (or just click on the reference number links in in-text citations).
-
-\subsubsection{A Note on bibtex}
-
-The bibtex backend used in the template by default does not correctly handle unicode character encoding (i.e. "international" characters). You may see a warning about this in the compilation log and, if your references contain unicode characters, they may not show up correctly or at all. The solution to this is to use the biber backend instead of the outdated bibtex backend. This is done by finding this in \file{main.tex}: \option{backend=bibtex} and changing it to \option{backend=biber}. You will then need to delete all auxiliary BibTeX files and navigate to the template directory in your terminal (command prompt). Once there, simply type \code{biber main} and biber will compile your bibliography. You can then compile \file{main.tex} as normal and your bibliography will be updated. An alternative is to set up your LaTeX editor to compile with biber instead of bibtex, see \href{http://tex.stackexchange.com/questions/154751/biblatex-with-biber-configuring-my-editor-to-avoid-undefined-citations/}{here} for how to do this for various editors.
-
-\subsection{Tables}
-
-Tables are an important way of displaying your results, below is an example table which was generated with this code:
-
-{\small
-\begin{verbatim}
-\begin{table}
-\caption{The effects of treatments X and Y on the four groups studied.}
-\label{tab:treatments}
-\centering
-\begin{tabular}{l l l}
-\toprule
-\tabhead{Groups} & \tabhead{Treatment X} & \tabhead{Treatment Y} \\
-\midrule
-1 & 0.2 & 0.8\\
-2 & 0.17 & 0.7\\
-3 & 0.24 & 0.75\\
-4 & 0.68 & 0.3\\
-\bottomrule\\
-\end{tabular}
-\end{table}
-\end{verbatim}
-}
-
-\begin{table}
-\caption{The effects of treatments X and Y on the four groups studied.}
-\label{tab:treatments}
-\centering
-\begin{tabular}{l l l}
-\toprule
-\tabhead{Groups} & \tabhead{Treatment X} & \tabhead{Treatment Y} \\
-\midrule
-1 & 0.2 & 0.8\\
-2 & 0.17 & 0.7\\
-3 & 0.24 & 0.75\\
-4 & 0.68 & 0.3\\
-\bottomrule\\
-\end{tabular}
-\end{table}
-
-You can reference tables with \verb|\ref{<label>}| where the label is defined within the table environment. See \file{Chapter1.tex} for an example of the label and citation (e.g. Table~\ref{tab:treatments}).
-
-\subsection{Figures}
-
-There will hopefully be many figures in your thesis (that should be placed in the \emph{Figures} folder). The way to insert figures into your thesis is to use a code template like this:
-\begin{verbatim}
-\begin{figure}
-\centering
-\includegraphics{Figures/Electron}
-\decoRule
-\caption[An Electron]{An electron (artist's impression).}
-\label{fig:Electron}
-\end{figure}
-\end{verbatim}
-Also look in the source file. Putting this code into the source file produces the picture of the electron that you can see in the figure below.
-
-\begin{figure}[th]
-\centering
-\includegraphics{Figures/Electron}
-\decoRule
-\caption[An Electron]{An electron (artist's impression).}
-\label{fig:Electron}
-\end{figure}
-
-Sometimes figures don't always appear where you write them in the source. The placement depends on how much space there is on the page for the figure. Sometimes there is not enough room to fit a figure directly where it should go (in relation to the text) and so \LaTeX{} puts it at the top of the next page. Positioning figures is the job of \LaTeX{} and so you should only worry about making them look good!
-
-Figures usually should have captions just in case you need to refer to them (such as in Figure~\ref{fig:Electron}). The \verb|\caption| command contains two parts, the first part, inside the square brackets is the title that will appear in the \emph{List of Figures}, and so should be short. The second part in the curly brackets should contain the longer and more descriptive caption text.
-
-The \verb|\decoRule| command is optional and simply puts an aesthetic horizontal line below the image. If you do this for one image, do it for all of them.
-
-\LaTeX{} is capable of using images in pdf, jpg and png format.
-
-\subsection{Typesetting mathematics}
-
-If your thesis is going to contain heavy mathematical content, be sure that \LaTeX{} will make it look beautiful, even though it won't be able to solve the equations for you.
-
-The \enquote{Not So Short Introduction to \LaTeX} (available on \href{http://www.ctan.org/tex-archive/info/lshort/english/lshort.pdf}{CTAN}) should tell you everything you need to know for most cases of typesetting mathematics. If you need more information, a much more thorough mathematical guide is available from the AMS called, \enquote{A Short Math Guide to \LaTeX} and can be downloaded from:
-\url{ftp://ftp.ams.org/pub/tex/doc/amsmath/short-math-guide.pdf}
-
-There are many different \LaTeX{} symbols to remember, luckily you can find the most common symbols in \href{http://ctan.org/pkg/comprehensive}{The Comprehensive \LaTeX~Symbol List}.
-
-You can write an equation, which is automatically given an equation number by \LaTeX{} like this:
-\begin{verbatim}
-\begin{equation}
-E = mc^{2}
-\label{eqn:Einstein}
-\end{equation}
-\end{verbatim}
-
-This will produce Einstein's famous energy-matter equivalence equation:
-\begin{equation}
-E = mc^{2}
-\label{eqn:Einstein}
-\end{equation}
-
-All equations you write (which are not in the middle of paragraph text) are automatically given equation numbers by \LaTeX{}. If you don't want a particular equation numbered, use the unnumbered form:
-\begin{verbatim}
-\[ a^{2}=4 \]
-\end{verbatim}
-
-%----------------------------------------------------------------------------------------
-
-\section{Sectioning and Subsectioning}
-
-You should break your thesis up into nice, bite-sized sections and subsections. \LaTeX{} automatically builds a table of Contents by looking at all the \verb|\chapter{}|, \verb|\section{}| and \verb|\subsection{}| commands you write in the source.
-
-The Table of Contents should only list the sections to three (3) levels. A \verb|chapter{}| is level zero (0). A \verb|\section{}| is level one (1) and so a \verb|\subsection{}| is level two (2). In your thesis it is likely that you will even use a \verb|subsubsection{}|, which is level three (3). The depth to which the Table of Contents is formatted is set within \file{MastersDoctoralThesis.cls}. If you need this changed, you can do it in \file{main.tex}.
-
-%----------------------------------------------------------------------------------------
-
-\section{In Closing}
-
-You have reached the end of this mini-guide. You can now rename or overwrite this pdf file and begin writing your own \file{Chapter1.tex} and the rest of your thesis. The easy work of setting up the structure and framework has been taken care of for you. It's now your job to fill it out!
-
-Good luck and have lots of fun!
-
-\begin{flushright}
-Guide written by ---\\
-Sunil Patel: \href{http://www.sunilpatel.co.uk}{www.sunilpatel.co.uk}\\
-Vel: \href{http://www.LaTeXTemplates.com}{LaTeXTemplates.com}
-\end{flushright}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Chapters/Chapter2.aux Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,154 +0,0 @@
-\relax
-\providecommand\hyper@newdestlabel[2]{}
-\@writefile{toc}{\contentsline {chapter}{\numberline {2}Chapter Title Here}{23}{chapter.50}}
-\@writefile{lof}{\addvspace {10\p@ }}
-\@writefile{lot}{\addvspace {10\p@ }}
-\newlabel{ChapterX}{{2}{23}{Chapter Title Here}{chapter.50}{}}
-\@writefile{toc}{\contentsline {section}{\numberline {2.1}Properties of $\delimiter "026E30F c$}{23}{section.51}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {2.1.1}function $\delimiter "026E30F c$ is not 1-to-1}{23}{subsection.52}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {2.1.2}Subsection 1}{23}{subsection.53}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {2.1.3}Subsection 2}{23}{subsection.54}}
-\@writefile{toc}{\contentsline {section}{\numberline {2.2}Main Section 2}{24}{section.55}}
-\@setckpt{Chapters/Chapter2}{
-\setcounter{page}{25}
-\setcounter{equation}{0}
-\setcounter{enumi}{0}
-\setcounter{enumii}{0}
-\setcounter{enumiii}{0}
-\setcounter{enumiv}{0}
-\setcounter{footnote}{0}
-\setcounter{mpfootnote}{0}
-\setcounter{part}{0}
-\setcounter{chapter}{2}
-\setcounter{section}{2}
-\setcounter{subsection}{0}
-\setcounter{subsubsection}{0}
-\setcounter{paragraph}{0}
-\setcounter{subparagraph}{0}
-\setcounter{figure}{0}
-\setcounter{table}{0}
-\setcounter{LT@tables}{3}
-\setcounter{LT@chunks}{1}
-\setcounter{ContinuedFloat}{0}
-\setcounter{Item}{0}
-\setcounter{Hfootnote}{1}
-\setcounter{bookmark@seq@number}{35}
-\setcounter{tabx@nest}{0}
-\setcounter{listtotal}{0}
-\setcounter{listcount}{0}
-\setcounter{liststart}{0}
-\setcounter{liststop}{0}
-\setcounter{citecount}{0}
-\setcounter{citetotal}{0}
-\setcounter{multicitecount}{0}
-\setcounter{multicitetotal}{0}
-\setcounter{instcount}{6}
-\setcounter{maxnames}{3}
-\setcounter{minnames}{1}
-\setcounter{maxitems}{3}
-\setcounter{minitems}{1}
-\setcounter{citecounter}{0}
-\setcounter{savedcitecounter}{0}
-\setcounter{uniquelist}{0}
-\setcounter{uniquename}{0}
-\setcounter{refsection}{0}
-\setcounter{refsegment}{0}
-\setcounter{maxextratitle}{0}
-\setcounter{maxextratitleyear}{0}
-\setcounter{maxextradate}{0}
-\setcounter{maxextraalpha}{0}
-\setcounter{abbrvpenalty}{50}
-\setcounter{highnamepenalty}{50}
-\setcounter{lownamepenalty}{25}
-\setcounter{maxparens}{3}
-\setcounter{parenlevel}{0}
-\setcounter{mincomprange}{10}
-\setcounter{maxcomprange}{100000}
-\setcounter{mincompwidth}{1}
-\setcounter{afterword}{0}
-\setcounter{savedafterword}{0}
-\setcounter{annotator}{0}
-\setcounter{savedannotator}{0}
-\setcounter{author}{0}
-\setcounter{savedauthor}{0}
-\setcounter{bookauthor}{0}
-\setcounter{savedbookauthor}{0}
-\setcounter{commentator}{0}
-\setcounter{savedcommentator}{0}
-\setcounter{editor}{0}
-\setcounter{savededitor}{0}
-\setcounter{editora}{0}
-\setcounter{savededitora}{0}
-\setcounter{editorb}{0}
-\setcounter{savededitorb}{0}
-\setcounter{editorc}{0}
-\setcounter{savededitorc}{0}
-\setcounter{foreword}{0}
-\setcounter{savedforeword}{0}
-\setcounter{holder}{0}
-\setcounter{savedholder}{0}
-\setcounter{introduction}{0}
-\setcounter{savedintroduction}{0}
-\setcounter{namea}{0}
-\setcounter{savednamea}{0}
-\setcounter{nameb}{0}
-\setcounter{savednameb}{0}
-\setcounter{namec}{0}
-\setcounter{savednamec}{0}
-\setcounter{translator}{0}
-\setcounter{savedtranslator}{0}
-\setcounter{shortauthor}{0}
-\setcounter{savedshortauthor}{0}
-\setcounter{shorteditor}{0}
-\setcounter{savedshorteditor}{0}
-\setcounter{labelname}{0}
-\setcounter{savedlabelname}{0}
-\setcounter{institution}{0}
-\setcounter{savedinstitution}{0}
-\setcounter{lista}{0}
-\setcounter{savedlista}{0}
-\setcounter{listb}{0}
-\setcounter{savedlistb}{0}
-\setcounter{listc}{0}
-\setcounter{savedlistc}{0}
-\setcounter{listd}{0}
-\setcounter{savedlistd}{0}
-\setcounter{liste}{0}
-\setcounter{savedliste}{0}
-\setcounter{listf}{0}
-\setcounter{savedlistf}{0}
-\setcounter{location}{0}
-\setcounter{savedlocation}{0}
-\setcounter{organization}{0}
-\setcounter{savedorganization}{0}
-\setcounter{origlocation}{0}
-\setcounter{savedoriglocation}{0}
-\setcounter{origpublisher}{0}
-\setcounter{savedorigpublisher}{0}
-\setcounter{publisher}{0}
-\setcounter{savedpublisher}{0}
-\setcounter{language}{0}
-\setcounter{savedlanguage}{0}
-\setcounter{origlanguage}{0}
-\setcounter{savedoriglanguage}{0}
-\setcounter{pageref}{0}
-\setcounter{savedpageref}{0}
-\setcounter{textcitecount}{0}
-\setcounter{textcitetotal}{0}
-\setcounter{textcitemaxnames}{0}
-\setcounter{biburlnumpenalty}{0}
-\setcounter{biburlucpenalty}{0}
-\setcounter{biburllcpenalty}{0}
-\setcounter{smartand}{1}
-\setcounter{bbx:relatedcount}{0}
-\setcounter{bbx:relatedtotal}{0}
-\setcounter{parentequation}{0}
-\setcounter{ALG@line}{0}
-\setcounter{ALG@rem}{0}
-\setcounter{ALG@nested}{0}
-\setcounter{ALG@Lnr}{2}
-\setcounter{ALG@blocknr}{10}
-\setcounter{ALG@storecount}{0}
-\setcounter{ALG@tmpcounter}{0}
-\setcounter{section@level}{1}
-}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Chapters/Chapter2.tex Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,69 +0,0 @@
-% Chapter Template
-
-\chapter{Chapter Title Here} % Main chapter title
-
-\label{ChapterX} % Change X to a consecutive number; for referencing this chapter elsewhere, use \ref{ChapterX}
-
-%----------------------------------------------------------------------------------------
-% SECTION 1
-%----------------------------------------------------------------------------------------
-
-\section{Properties of $\backslash c$}
-
-To have a clear idea of what we can and
-need to prove about the algorithms involving
-Brzozowski's derivatives, there are a few
-properties we need to be clear about
-it.
-\subsection{function $\backslash c$ is not 1-to-1}
-\begin{center}
-The derivative $w.r.t$ character $c$ is not one-to-one.
-Formally,
- $\exists r_1 \;r_2. r_1 \neq r_2 \mathit{and} r_1 \backslash c = r_2 \backslash c$
-\end{center}
-This property is trivially true for the
-character regex example:
-\begin{center}
- $r_1 = e; \; r_2 = d;\; r_1 \backslash c = \ZERO = r_2 \backslash c$
-\end{center}
-But apart from the cases where the derivative
-output is $\ZERO$, are there non-trivial results
-of derivatives which contain strings?
-The answer is yes.
-For example,
-\begin{center}
- Let $r_1 = a^*b\;\quad r_2 = (a\cdot a^*)\cdot b + b$.\\
- where $a$ is not nullable.\\
- $r_1 \backslash c = ((a \backslash c)\cdot a^*)\cdot c + b \backslash c$\\
- $r_2 \backslash c = ((a \backslash c)\cdot a^*)\cdot c + b \backslash c$
-\end{center}
-We start with two syntactically different regexes,
-and end up with the same derivative result, which is
-a "meaningful" regex because it contains strings.
-We have rediscovered Arden's lemma:\\
-\begin{center}
- $A^*B = A\cdot A^* \cdot B + B$
-\end{center}
-
-
-%-----------------------------------
-% SUBSECTION 1
-%-----------------------------------
-\subsection{Subsection 1}
-
-Nunc posuere quam at lectus tristique eu ultrices augue venenatis. Vestibulum ante ipsum primis in faucibus orci luctus et ultrices posuere cubilia Curae; Aliquam erat volutpat. Vivamus sodales tortor eget quam adipiscing in vulputate ante ullamcorper. Sed eros ante, lacinia et sollicitudin et, aliquam sit amet augue. In hac habitasse platea dictumst.
-
-%-----------------------------------
-% SUBSECTION 2
-%-----------------------------------
-
-\subsection{Subsection 2}
-Morbi rutrum odio eget arcu adipiscing sodales. Aenean et purus a est pulvinar pellentesque. Cras in elit neque, quis varius elit. Phasellus fringilla, nibh eu tempus venenatis, dolor elit posuere quam, quis adipiscing urna leo nec orci. Sed nec nulla auctor odio aliquet consequat. Ut nec nulla in ante ullamcorper aliquam at sed dolor. Phasellus fermentum magna in augue gravida cursus. Cras sed pretium lorem. Pellentesque eget ornare odio. Proin accumsan, massa viverra cursus pharetra, ipsum nisi lobortis velit, a malesuada dolor lorem eu neque.
-
-%----------------------------------------------------------------------------------------
-% SECTION 2
-%----------------------------------------------------------------------------------------
-
-\section{Main Section 2}
-
-Sed ullamcorper quam eu nisl interdum at interdum enim egestas. Aliquam placerat justo sed lectus lobortis ut porta nisl porttitor. Vestibulum mi dolor, lacinia molestie gravida at, tempus vitae ligula. Donec eget quam sapien, in viverra eros. Donec pellentesque justo a massa fringilla non vestibulum metus vestibulum. Vestibulum in orci quis felis tempor lacinia. Vivamus ornare ultrices facilisis. Ut hendrerit volutpat vulputate. Morbi condimentum venenatis augue, id porta ipsum vulputate in. Curabitur luctus tempus justo. Vestibulum risus lectus, adipiscing nec condimentum quis, condimentum nec nisl. Aliquam dictum sagittis velit sed iaculis. Morbi tristique augue sit amet nulla pulvinar id facilisis ligula mollis. Nam elit libero, tincidunt ut aliquam at, molestie in quam. Aenean rhoncus vehicula hendrerit.
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Chapters/Chapter3.aux Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,153 +0,0 @@
-\relax
-\providecommand\hyper@newdestlabel[2]{}
-\@writefile{toc}{\contentsline {chapter}{\numberline {3}Common Identities In Simplification-Related Functions}{25}{chapter.56}}
-\@writefile{lof}{\addvspace {10\p@ }}
-\@writefile{lot}{\addvspace {10\p@ }}
-\newlabel{ChapterX}{{3}{25}{Common Identities In Simplification-Related Functions}{chapter.56}{}}
-\@writefile{toc}{\contentsline {section}{\numberline {3.1}Idempotency of $\mathit {simp}$}{25}{section.57}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {3.1.1}Syntactic Equivalence Under $\mathit {simp}$}{25}{subsection.59}}
-\@writefile{toc}{\contentsline {subsection}{\numberline {3.1.2}Subsection 2}{25}{subsection.60}}
-\@writefile{toc}{\contentsline {section}{\numberline {3.2}Main Section 2}{25}{section.61}}
-\@setckpt{Chapters/Chapter3}{
-\setcounter{page}{26}
-\setcounter{equation}{1}
-\setcounter{enumi}{0}
-\setcounter{enumii}{0}
-\setcounter{enumiii}{0}
-\setcounter{enumiv}{0}
-\setcounter{footnote}{0}
-\setcounter{mpfootnote}{0}
-\setcounter{part}{0}
-\setcounter{chapter}{3}
-\setcounter{section}{2}
-\setcounter{subsection}{0}
-\setcounter{subsubsection}{0}
-\setcounter{paragraph}{0}
-\setcounter{subparagraph}{0}
-\setcounter{figure}{0}
-\setcounter{table}{0}
-\setcounter{LT@tables}{3}
-\setcounter{LT@chunks}{1}
-\setcounter{ContinuedFloat}{0}
-\setcounter{Item}{0}
-\setcounter{Hfootnote}{1}
-\setcounter{bookmark@seq@number}{40}
-\setcounter{tabx@nest}{0}
-\setcounter{listtotal}{0}
-\setcounter{listcount}{0}
-\setcounter{liststart}{0}
-\setcounter{liststop}{0}
-\setcounter{citecount}{0}
-\setcounter{citetotal}{0}
-\setcounter{multicitecount}{0}
-\setcounter{multicitetotal}{0}
-\setcounter{instcount}{6}
-\setcounter{maxnames}{3}
-\setcounter{minnames}{1}
-\setcounter{maxitems}{3}
-\setcounter{minitems}{1}
-\setcounter{citecounter}{0}
-\setcounter{savedcitecounter}{0}
-\setcounter{uniquelist}{0}
-\setcounter{uniquename}{0}
-\setcounter{refsection}{0}
-\setcounter{refsegment}{0}
-\setcounter{maxextratitle}{0}
-\setcounter{maxextratitleyear}{0}
-\setcounter{maxextradate}{0}
-\setcounter{maxextraalpha}{0}
-\setcounter{abbrvpenalty}{50}
-\setcounter{highnamepenalty}{50}
-\setcounter{lownamepenalty}{25}
-\setcounter{maxparens}{3}
-\setcounter{parenlevel}{0}
-\setcounter{mincomprange}{10}
-\setcounter{maxcomprange}{100000}
-\setcounter{mincompwidth}{1}
-\setcounter{afterword}{0}
-\setcounter{savedafterword}{0}
-\setcounter{annotator}{0}
-\setcounter{savedannotator}{0}
-\setcounter{author}{0}
-\setcounter{savedauthor}{0}
-\setcounter{bookauthor}{0}
-\setcounter{savedbookauthor}{0}
-\setcounter{commentator}{0}
-\setcounter{savedcommentator}{0}
-\setcounter{editor}{0}
-\setcounter{savededitor}{0}
-\setcounter{editora}{0}
-\setcounter{savededitora}{0}
-\setcounter{editorb}{0}
-\setcounter{savededitorb}{0}
-\setcounter{editorc}{0}
-\setcounter{savededitorc}{0}
-\setcounter{foreword}{0}
-\setcounter{savedforeword}{0}
-\setcounter{holder}{0}
-\setcounter{savedholder}{0}
-\setcounter{introduction}{0}
-\setcounter{savedintroduction}{0}
-\setcounter{namea}{0}
-\setcounter{savednamea}{0}
-\setcounter{nameb}{0}
-\setcounter{savednameb}{0}
-\setcounter{namec}{0}
-\setcounter{savednamec}{0}
-\setcounter{translator}{0}
-\setcounter{savedtranslator}{0}
-\setcounter{shortauthor}{0}
-\setcounter{savedshortauthor}{0}
-\setcounter{shorteditor}{0}
-\setcounter{savedshorteditor}{0}
-\setcounter{labelname}{0}
-\setcounter{savedlabelname}{0}
-\setcounter{institution}{0}
-\setcounter{savedinstitution}{0}
-\setcounter{lista}{0}
-\setcounter{savedlista}{0}
-\setcounter{listb}{0}
-\setcounter{savedlistb}{0}
-\setcounter{listc}{0}
-\setcounter{savedlistc}{0}
-\setcounter{listd}{0}
-\setcounter{savedlistd}{0}
-\setcounter{liste}{0}
-\setcounter{savedliste}{0}
-\setcounter{listf}{0}
-\setcounter{savedlistf}{0}
-\setcounter{location}{0}
-\setcounter{savedlocation}{0}
-\setcounter{organization}{0}
-\setcounter{savedorganization}{0}
-\setcounter{origlocation}{0}
-\setcounter{savedoriglocation}{0}
-\setcounter{origpublisher}{0}
-\setcounter{savedorigpublisher}{0}
-\setcounter{publisher}{0}
-\setcounter{savedpublisher}{0}
-\setcounter{language}{0}
-\setcounter{savedlanguage}{0}
-\setcounter{origlanguage}{0}
-\setcounter{savedoriglanguage}{0}
-\setcounter{pageref}{0}
-\setcounter{savedpageref}{0}
-\setcounter{textcitecount}{0}
-\setcounter{textcitetotal}{0}
-\setcounter{textcitemaxnames}{0}
-\setcounter{biburlnumpenalty}{0}
-\setcounter{biburlucpenalty}{0}
-\setcounter{biburllcpenalty}{0}
-\setcounter{smartand}{1}
-\setcounter{bbx:relatedcount}{0}
-\setcounter{bbx:relatedtotal}{0}
-\setcounter{parentequation}{0}
-\setcounter{ALG@line}{0}
-\setcounter{ALG@rem}{0}
-\setcounter{ALG@nested}{0}
-\setcounter{ALG@Lnr}{2}
-\setcounter{ALG@blocknr}{10}
-\setcounter{ALG@storecount}{0}
-\setcounter{ALG@tmpcounter}{0}
-\setcounter{section@level}{1}
-}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Chapters/Chapter3.tex Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,51 +0,0 @@
-% Chapter Template
-
-\chapter{Common Identities In Simplification-Related Functions} % Main chapter title
-
-\label{ChapterX} % Change X to a consecutive number; for referencing this chapter elsewhere, use \ref{ChapterX}
-
-
-
-%----------------------------------------------------------------------------------------
-% SECTION 1
-%----------------------------------------------------------------------------------------
-
-\section{Idempotency of $\simp$}
-
-\begin{equation}
- \simp \;r = \simp\; \simp \; r
-\end{equation}
-This property means we do not have to repeatedly
-apply simplification in each step, which justifies
-our definition of $\blexersimp$.
-It will also be useful in future proofs where properties such as
-closed forms are needed.
-The proof is by structural induction on $r$.
-
-%-----------------------------------
-% SUBSECTION 1
-%-----------------------------------
-\subsection{Syntactic Equivalence Under $\simp$}
-We prove that minor differences can be annhilated
-by $\simp$.
-For example,
-\begin{center}
-$\simp \;(\simpALTs\; (\map \;(\_\backslash \; x)\; (\distinct \; \mathit{rs}\; \phi))) =
- \simp \;(\simpALTs \;(\distinct \;(\map \;(\_ \backslash\; x) \; \mathit{rs}) \; \phi))$
-\end{center}
-
-
-%-----------------------------------
-% SUBSECTION 2
-%-----------------------------------
-
-\subsection{Subsection 2}
-Morbi rutrum odio eget arcu adipiscing sodales. Aenean et purus a est pulvinar pellentesque. Cras in elit neque, quis varius elit. Phasellus fringilla, nibh eu tempus venenatis, dolor elit posuere quam, quis adipiscing urna leo nec orci. Sed nec nulla auctor odio aliquet consequat. Ut nec nulla in ante ullamcorper aliquam at sed dolor. Phasellus fermentum magna in augue gravida cursus. Cras sed pretium lorem. Pellentesque eget ornare odio. Proin accumsan, massa viverra cursus pharetra, ipsum nisi lobortis velit, a malesuada dolor lorem eu neque.
-
-%----------------------------------------------------------------------------------------
-% SECTION 2
-%----------------------------------------------------------------------------------------
-
-\section{Main Section 2}
-
-Sed ullamcorper quam eu nisl interdum at interdum enim egestas. Aliquam placerat justo sed lectus lobortis ut porta nisl porttitor. Vestibulum mi dolor, lacinia molestie gravida at, tempus vitae ligula. Donec eget quam sapien, in viverra eros. Donec pellentesque justo a massa fringilla non vestibulum metus vestibulum. Vestibulum in orci quis felis tempor lacinia. Vivamus ornare ultrices facilisis. Ut hendrerit volutpat vulputate. Morbi condimentum venenatis augue, id porta ipsum vulputate in. Curabitur luctus tempus justo. Vestibulum risus lectus, adipiscing nec condimentum quis, condimentum nec nisl. Aliquam dictum sagittis velit sed iaculis. Morbi tristique augue sit amet nulla pulvinar id facilisis ligula mollis. Nam elit libero, tincidunt ut aliquam at, molestie in quam. Aenean rhoncus vehicula hendrerit.
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Chapters/ChapterTemplate.tex Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,35 +0,0 @@
-% Chapter Template
-
-\chapter{Chapter Title Here} % Main chapter title
-
-\label{ChapterX} % Change X to a consecutive number; for referencing this chapter elsewhere, use \ref{ChapterX}
-
-%----------------------------------------------------------------------------------------
-% SECTION 1
-%----------------------------------------------------------------------------------------
-
-\section{Main Section 1}
-
-Lorem ipsum dolor sit amet, consectetur adipiscing elit. Aliquam ultricies lacinia euismod. Nam tempus risus in dolor rhoncus in interdum enim tincidunt. Donec vel nunc neque. In condimentum ullamcorper quam non consequat. Fusce sagittis tempor feugiat. Fusce magna erat, molestie eu convallis ut, tempus sed arcu. Quisque molestie, ante a tincidunt ullamcorper, sapien enim dignissim lacus, in semper nibh erat lobortis purus. Integer dapibus ligula ac risus convallis pellentesque.
-
-%-----------------------------------
-% SUBSECTION 1
-%-----------------------------------
-\subsection{Subsection 1}
-
-Nunc posuere quam at lectus tristique eu ultrices augue venenatis. Vestibulum ante ipsum primis in faucibus orci luctus et ultrices posuere cubilia Curae; Aliquam erat volutpat. Vivamus sodales tortor eget quam adipiscing in vulputate ante ullamcorper. Sed eros ante, lacinia et sollicitudin et, aliquam sit amet augue. In hac habitasse platea dictumst.
-
-%-----------------------------------
-% SUBSECTION 2
-%-----------------------------------
-
-\subsection{Subsection 2}
-Morbi rutrum odio eget arcu adipiscing sodales. Aenean et purus a est pulvinar pellentesque. Cras in elit neque, quis varius elit. Phasellus fringilla, nibh eu tempus venenatis, dolor elit posuere quam, quis adipiscing urna leo nec orci. Sed nec nulla auctor odio aliquet consequat. Ut nec nulla in ante ullamcorper aliquam at sed dolor. Phasellus fermentum magna in augue gravida cursus. Cras sed pretium lorem. Pellentesque eget ornare odio. Proin accumsan, massa viverra cursus pharetra, ipsum nisi lobortis velit, a malesuada dolor lorem eu neque.
-
-%----------------------------------------------------------------------------------------
-% SECTION 2
-%----------------------------------------------------------------------------------------
-
-\section{Main Section 2}
-
-Sed ullamcorper quam eu nisl interdum at interdum enim egestas. Aliquam placerat justo sed lectus lobortis ut porta nisl porttitor. Vestibulum mi dolor, lacinia molestie gravida at, tempus vitae ligula. Donec eget quam sapien, in viverra eros. Donec pellentesque justo a massa fringilla non vestibulum metus vestibulum. Vestibulum in orci quis felis tempor lacinia. Vivamus ornare ultrices facilisis. Ut hendrerit volutpat vulputate. Morbi condimentum venenatis augue, id porta ipsum vulputate in. Curabitur luctus tempus justo. Vestibulum risus lectus, adipiscing nec condimentum quis, condimentum nec nisl. Aliquam dictum sagittis velit sed iaculis. Morbi tristique augue sit amet nulla pulvinar id facilisis ligula mollis. Nam elit libero, tincidunt ut aliquam at, molestie in quam. Aenean rhoncus vehicula hendrerit.
\ No newline at end of file
Binary file PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/Figures/Electron.pdf has changed
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/MastersDoctoralThesis.cls Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,544 +0,0 @@
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% Masters/Doctoral Thesis
-% Class File
-% Version 1.6 (27/8/17)
-%
-% This class was downloaded from:
-% http://www.LaTeXTemplates.com
-%
-% Authors:
-% Vel (vel@latextemplates.com)
-% Johannes Böttcher
-%
-% Notes:
-% 1) This class file defines the structure and layout of the template file (main.tex).
-% 2) It has been written in such a way that under most circumstances you should not need
-% to edit it; updating it to a newer version will be harder. If you do make changes, please change the name of
-% the file and add comments to make your changes more visible.
-%
-% Class license:
-% LPPL v1.3c (http://www.latex-project.org/lppl)
-%
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-
-%----------------------------------------------------------------------------------------
-% CLASS DEFINITION AND PARAMETERS
-%----------------------------------------------------------------------------------------
-
-\NeedsTeXFormat{LaTeX2e}[1996/12/01]
-\newcommand{\classname}{MastersDoctoralThesis}
-\ProvidesClass{\classname}[2017/08/27 v1.6 LaTeXTemplates.com]
-\providecommand{\baseclass}{book}
-\RequirePackage{etoolbox}
-\RequirePackage{xparse}
-\newbool{nolistspace}
-\newbool{chapteroneline}
-\newbool{listtoc}
-\newbool{toctoc}
-\newbool{parskip}
-\newbool{hyperrefsupport}
-\booltrue{hyperrefsupport}
-\newbool{headsepline}
-\newbool{consistentlayout}
-
-\DeclareOption{nohyperref}{\boolfalse{hyperrefsupport}}
-\DeclareOption{nolistspacing}{\booltrue{nolistspace}}
-\DeclareOption{liststotoc}{\booltrue{listtoc}}
-\DeclareOption{chapterinoneline}{\booltrue{chapteroneline}}
-\DeclareOption{toctotoc}{\booltrue{toctoc}}
-\DeclareOption{parskip}{\booltrue{parskip}}
-\DeclareOption{headsepline}{\booltrue{headsepline}}
-\DeclareOption{consistentlayout}{\booltrue{consistentlayout}}
-\DeclareOption*{\PassOptionsToClass{\CurrentOption}{\baseclass}}
-
-\ProcessOptions\relax
-
-\LoadClass{\baseclass}
-
-% Simple interface for the user to customize the chapter titles
-\ProvideDocumentCommand{\abovechapterskip}{}{\vspace*{20pt}}
-\ProvideDocumentCommand{\chapterbelowskip}{}{\vspace*{40pt}}
-\ProvideDocumentCommand{\chapterinbetweenskip}{}{\vspace*{20pt}}
-\ProvideDocumentCommand{\autodot}{}{}
-\ProvideDocumentCommand{\mdtChapapp}{}{}
-\ProvideDocumentCommand{\chapteralign}{}{\raggedright}
-\ProvideDocumentCommand{\chapterfont}{}{\Huge\bfseries}
-\ProvideDocumentCommand{\chapterprefixfont}{}{\LARGE\bfseries}
-\DeclareDocumentCommand{\@makechapterhead}{ m }{%
- \abovechapterskip
- {\parindent \z@ \chapteralign \normalfont
- \ifnum \c@secnumdepth >\m@ne
- \if@mainmatter
- \ifbool{chapteroneline}{%
- \chapterfont \mdtChapapp\thechapter\autodot\enspace
- }{%
- \chapterprefixfont \@chapapp\space \thechapter
- \par\nobreak
- \chapterinbetweenskip
- }%
- \fi
- \fi
- \interlinepenalty\@M%
- \chapterfont #1\par\nobreak
- \chapterbelowskip
- }
- \thispagestyle{\chapter@p@gestyle}
-}
-\def\@makeschapterhead#1{%
- \abovechapterskip
- {\parindent \z@ \chapteralign
- \normalfont
- \interlinepenalty\@M
- \chapterfont #1\par\nobreak
- \chapterbelowskip
- }
- \thispagestyle{\chapter@p@gestyle}
-}
-
-
-% Addchap provides unnumbered chapters with an entry in the table of contents as well as an updated header
-\ProvideDocumentCommand{\addchap}{ s o m }{%
- \chapter*{#3}%
- \markboth{}{}%
- \IfBooleanTF{#1}{%
- }{%
- \IfNoValueTF{#2}{%
- \addchaptertocentry{#3}%
- \markboth{\MakeMarkcase{#3}}{\MakeMarkcase{#3}}%
- }{%
- \addchaptertocentry{#2}%
- \markboth{\MakeMarkcase{#2}}{\MakeMarkcase{#2}}%
- }%
- }%
-}%
-
-\ProvideDocumentCommand{\addsec}{ s o m }{%
- \section*{#3}%
- \markright{}%
- \IfBooleanTF{#1}{%
- }{%
- \IfNoValueTF{#2}{%
- \addcontentsline{toc}{section}{#3}%
- \markright{\MakeMarkcase{#3}}%%
- }{%
- \addcontentsline{toc}{section}{#2}%
- \markright{\MakeMarkcase{#2}}%
- }%
- }%
-}%
-
-%----------------------------------------------------------------------------------------
-% CLASS OPTIONS
-%----------------------------------------------------------------------------------------
-
-\ifbool{parskip}{\RequirePackage{parskip}} % If the parskip option is passed to the class, require the parskip package
-
-
-\ifbool{listtoc}{% If the liststotoc option has been passed to the class, add the lists to the table of contents
- \patchcmd{\listoftables}{\@starttoc{lot}}{%
- \addchaptertocentry{\listtablename}\@starttoc{lot}%
- }{}{}%
- \patchcmd{\listoffigures}{\@starttoc{lof}}{%
- \addchaptertocentry{\listfigurename}\@starttoc{lof}%
- }{}{}%
-}
-
-\ifbool{toctoc}{% If the toctotoc options has been passed to the class, add the table of contents to the table of contents
- \patchcmd{\tableofcontents}{\@starttoc{toc}%
-}{%
- \addchaptertocentry{\contentsname}\@starttoc{toc}}{}{}%
-}
-
-\patchcmd{\tableofcontents}{\MakeUppercase}{\MakeMarkcase}{}{}
-\patchcmd{\tableofcontents}{\MakeUppercase}{\MakeMarkcase}{}{}
-\patchcmd{\listoffigures}{\MakeUppercase}{\MakeMarkcase}{}{}
-\patchcmd{\listoffigures}{\MakeUppercase}{\MakeMarkcase}{}{}
-\patchcmd{\listoftables}{\MakeUppercase}{\MakeMarkcase}{}{}
-\patchcmd{\listoftables}{\MakeUppercase}{\MakeMarkcase}{}{}
-
-% If the option `nolistspacing' is given, the spacing in the different lists is reduced to single spacing. This option is only useful, if the spacing of the document has been changed to onehalfspacing or doublespacing.
-\ifbool{nolistspace}{
- \patchcmd{\listoffigures}{%
- \@starttoc{lof}
- }{%
- \begingroup%
- \singlespace\@starttoc{lof}\endgroup%
- }{}{}%
- \patchcmd{\listoftables}{%
- \@starttoc{lot}
- }{%
- \begingroup%
- \singlespace\@starttoc{lot}\endgroup%
- }{}{}%
- \patchcmd{\tableofcontents}{%
- \@starttoc{toc}
- }{%
- \begingroup%
- \singlespace\@starttoc{toc}\endgroup%
- }{}{}%
-}{}
-
-
-%----------------------------------------------------------------------------------------
-% REQUIRED PACKAGES
-%----------------------------------------------------------------------------------------
-
-\RequirePackage{babel} % Required for automatically changing names of document elements to languages besides english
-
-\RequirePackage{scrbase} % Required for handling language-dependent names of sections/document elements
-
-\RequirePackage{scrhack} % Loads fixes for various packages
-
-\RequirePackage{setspace} % Required for changing line spacing
-
-\RequirePackage{longtable} % Required for tables that span multiple pages (used in the symbols, abbreviations and physical constants pages)
-
-\RequirePackage{siunitx} % Required for \SI commands
-
-\RequirePackage{graphicx} % Required to include images
-\graphicspath{{Figures/}{./}} % Specifies where to look for included images
-
-\RequirePackage{booktabs} % Required for better table rules
-
-\RequirePackage{caption} % Required for customising the captions
-\captionsetup{justification=centerlast,font=small,labelfont=sc,margin=50pt}
-
-%----------------------------------------------------------------------------------------
-% DEFINE CUSTOM THESIS INFORMATION COMMANDS
-%----------------------------------------------------------------------------------------
-
-\NewDocumentCommand{\thesistitle} { o m }{%
- \IfValueTF{#1}{\def\shorttitle{#1}}{\def\shorttitle{#2}}%
- \def\@title{#2}%
- \def\ttitle{#2}%
-}
-\DeclareDocumentCommand{\author}{m}{\newcommand{\authorname}{#1}\renewcommand{\@author}{#1}}
-\NewDocumentCommand{\supervisor}{m}{\newcommand{\supname}{#1}}
-\NewDocumentCommand{\examiner}{m}{\newcommand{\examname}{#1}}
-\NewDocumentCommand{\degree}{m}{\newcommand{\degreename}{#1}}
-\NewDocumentCommand{\addresses}{m}{\newcommand{\addressname}{#1}}
-\NewDocumentCommand{\university}{m}{\newcommand{\univname}{#1}}
-\NewDocumentCommand{\department}{m}{\newcommand{\deptname}{#1}}
-\NewDocumentCommand{\group}{m}{\newcommand{\groupname}{#1}}
-\NewDocumentCommand{\faculty}{m}{\newcommand{\facname}{#1}}
-\NewDocumentCommand{\subject}{m}{\newcommand{\subjectname}{#1}}
-\NewDocumentCommand{\keywords}{m}{\newcommand{\keywordnames}{#1}}
-
-\newcommand{\checktoopen}{% New command to move content to the next page which prints to the next odd page if twosided mode is active
- \if@openright\cleardoublepage\else\clearpage\fi
- \ifdef{\phantomsection}{\phantomsection}{}% The \phantomsection command is necessary for hyperref to jump to the correct page
-}
-
-\NewDocumentCommand{\bhrule}{}{\typeout{--------------------}}
-\NewDocumentCommand{\tttypeout}{m}{\bhrule\typeout{\space #1}\bhrule}
-
-\newcommand{\HRule}{\rule{.9\linewidth}{.6pt}} % New command to make the lines in the title page
-\newcommand{\decoRule}{\rule{.8\textwidth}{.4pt}} % New command for a rule to be used under figures
-
-\setcounter{tocdepth}{3} % The depth to which the document sections are printed to the table of contents
-\ProvideDocumentCommand{\addchaptertocentry}{ m }{%
- \addcontentsline{toc}{chapter}{#1}%
-}
-
-%----------------------------------------------------------------------------------------
-% COLOURS
-%----------------------------------------------------------------------------------------
-
-\usepackage{xcolor} % Required for specifying custom colours
-
-\colorlet{mdtRed}{red!50!black}
-
-%----------------------------------------------------------------------------------------
-% MARGINS
-%----------------------------------------------------------------------------------------
-
-\RequirePackage{geometry}
-\geometry{
- headheight=4ex,
- includehead,
- includefoot
-}
-
-\raggedbottom
-
-%----------------------------------------------------------------------------------------
-% PENALTIES
-%----------------------------------------------------------------------------------------
-
-\doublehyphendemerits=10000 % No consecutive line hyphens
-\brokenpenalty=10000 % No broken words across columns/pages
-\widowpenalty=9999 % Almost no widows at bottom of page
-\clubpenalty=9999 % Almost no orphans at top of page
-\interfootnotelinepenalty=9999 % Almost never break footnotes
-
-%----------------------------------------------------------------------------------------
-% HEADERS AND FOOTERS
-%----------------------------------------------------------------------------------------
-
-\RequirePackage[markcase=used]{scrlayer-scrpage}
-\providepairofpagestyles{thesisSimple}{%
- \clearpairofpagestyles%
- \automark[chapter]{chapter}
- \ihead{\headmark}% Inner header
- \ohead[\pagemark]{\pagemark}% Outer header
-}
-\ifoot{}% Inner footer
-\ofoot{}% Outer footer
-\pagestyle{thesisSimple}
-\providepairofpagestyles[thesisSimple]{thesis}{%
- \automark*[section]{}%
-}
-\providepairofpagestyles[thesisSimple]{review}{%
- \ofoot[\shorttitle/\authorname]{\shorttitle/\authorname}
- \ifoot[\today]{\today}
-}
-\pagestyle{thesis}
-\ifbool{headsepline}{\KOMAoption{headsepline}{true}}{}
-\PreventPackageFromLoading[\ClassError{\classname}{Package `fancyhdr' is
-incompatible\MessageBreak with this class}{The pagesyles are defined
- using package `scrlayer-scrpage', please consult the\MessageBreak
-KOMA-script documentation for details.}]{fancyhdr}
-
-
-\newcommand{\blank@p@gestyle}{empty}
-\newcommand{\chapter@p@gestyle}{plain}
-\NewDocumentCommand{\blankpagestyle}{ m }{%
- \ClassWarning{\classname}{\string\blankpagestyle\space is
- obsolete,\MessageBreak use \string\setblankpagestyle \space instead}\renewcommand{\blank@p@gestyle}{}{#1}
-}
-\NewDocumentCommand{\setblankpagestyle}{ m }{\renewcommand{\blank@p@gestyle}{#1}}
-\NewDocumentCommand{\setchapterpagestyle}{ m }{\renewcommand{\chapter@p@gestyle}{#1}}
-
-\DeclareDocumentCommand\cleardoublepage{}{\clearpage\if@twoside \ifodd\c@page\else
- \hbox{}
- \thispagestyle{\blank@p@gestyle}
- \newpage
- \if@twocolumn\hbox{}\newpage\fi\fi\fi%
-}
-
-%----------------------------------------------------------------------------------------
-% ABBREVIATIONS PAGE DESIGN
-%----------------------------------------------------------------------------------------
-
-\newcommand{\abbrevname}{List of Abbreviations}
-\providecaptionname{english,british,american}{\abbrevname}{List of Abbreviations}
-\providecaptionname{ngerman,german,austrian,naustrian}{\abbrevname}{Abk\"urzungsverzeichnis}
-\NewDocumentEnvironment{abbreviations}{ m }{%
- \ifbool{nolistspace}{\begingroup\singlespacing}{}
- \ifbool{listtoc}{\addchap{\abbrevname}}{\addchap*{\abbrevname}}
- \begin{longtable}{#1}
- }{%
- \end{longtable}
- \addtocounter{table}{-1}% Don't count this table as one of the document tables
- \ifbool{nolistspace}{\endgroup}{}
-}
-
-%----------------------------------------------------------------------------------------
-% ABSTRACT PAGE DESIGN
-%----------------------------------------------------------------------------------------
-
-\DeclareDocumentCommand{\abstractauthorfont}{}{}
-\DeclareDocumentCommand{\abstracttitlefont}{}{}
-\newcommand{\byname}{by}
-\newcommand{\abstractname}{Abstract}
-\providecaptionname{german,ngerman,austrian,naustrian}{\byname}{von}
-\providecaptionname{american,australian,british,canadian,english,newzealand,UKenglish,USenglish}{\byname}{by}
-\ifbool{consistentlayout}{
- \DeclareDocumentEnvironment{abstract}{ O{} }{%
- \addchap*{\abstractname}%
- {\chapteralign\normalsize\abstractauthorfont \authorname \par}% Author name
- \vspace{\baselineskip}
- {\chapteralign\parbox{.7\linewidth}{\chapteralign\normalsize\itshape\abstracttitlefont\@title}\par}% Thesis title
- \bigskip\noindent\ignorespaces
- }%
- {}%end alt-abstract
-}{%
- \DeclareDocumentEnvironment{abstract}{ O{\null\vfill} }{
- \checktoopen
- \tttypeout{\abstractname}
- #1%added to be able to have abstract more than one page long
- \thispagestyle{plain}
- \begin{center}
- {\normalsize \MakeUppercase{\univname} \par}% University name in capitals
- \bigskip
- {\huge\textit{\abstractname} \par}
- \bigskip
- {\normalsize \facname \par}% Faculty name
- {\normalsize \deptname \par}% Department name
- \bigskip
- {\normalsize \degreename\par}% Degree name
- \bigskip
- {\normalsize\bfseries \@title \par}% Thesis title
- \medskip
- {\normalsize \byname{} \authorname \par}% Author name
- \bigskip
- \end{center}
- }
- {
- \vfill\null
- }
-}
-
-\DeclareDocumentEnvironment{extraAbstract}{ O{\null\vfill} }{
- \checktoopen
- \tttypeout{\abstractname}
- #1%added to be able to have abstract more than one page long
- \thispagestyle{empty}
- \begin{center}
- {\normalsize \MakeUppercase{\univname} \par}% University name in capitals
- \bigskip
- {\huge\textit{\abstractname} \par}
- \bigskip
- {\normalsize \facname \par}% Faculty name
- {\normalsize \deptname \par}% Department name
- \bigskip
- {\normalsize \degreename\par}% Degree name
- \bigskip
- {\normalsize\bfseries \@title \par}% Thesis title
- \medskip
- {\normalsize \byname{} \authorname \par}% Author name
- \bigskip
- \end{center}
-}
-{
- \vfill\null
-}
-
-%----------------------------------------------------------------------------------------
-% ACKNOWLEDGEMENTS PAGE DESIGN
-%----------------------------------------------------------------------------------------
-
-\usepackage{xcolor}
-\colorlet{mdtRed}{red!50!black}
-\newcommand{\acknowledgementname}{Acknowledgements}
-\providecaptionname{american,australian,british,canadian,english,newzealand,UKenglish,USenglish} {\acknowledgementname}{Acknowledgements} % Acknowledgement text for English countries
-\providecaptionname{german,ngerman,austrian,naustrian}{\acknowledgementname}{Danksagung} % Acknowledgement text for Germanic countries
-
-\ifbool{consistentlayout}{
- \DeclareDocumentEnvironment{acknowledgements}{}{%
- \tttypeout{\acknowledgementname}
- \addchap*{\acknowledgementname}
- }
-}
-{
- \DeclareDocumentEnvironment{acknowledgements}{}{%
- \checktoopen
- \tttypeout{\acknowledgementname}
- \thispagestyle{plain}
- \begin{center}{\huge\textit{\acknowledgementname}\par}\end{center}
- }
- {
- \vfil\vfil\null
- }
-}
-
-%----------------------------------------------------------------------------------------
-% DECLARATION PAGE DESIGN
-%----------------------------------------------------------------------------------------
-
-\newcommand{\authorshipname}{Declaration of Authorship}
-\providecaptionname{american,australian,british,canadian,english,newzealand,UKenglish,USenglish}{\authorshipname}{Declaration of Authorship} % Declaration of Authorship text for English countries
-\providecaptionname{german,ngerman,austrian,naustrian}{\authorshipname}{Eidesstattliche Erkl\"arung} % Declaration of Authorship text for Germanic countries
-
-\ifbool{consistentlayout}{
- \DeclareDocumentEnvironment{declaration}{}{
- \addchap*{\authorshipname}
- }{}%
-}{
- \DeclareDocumentEnvironment{declaration}{}{
- \checktoopen
- \tttypeout{\authorshipname}
- \thispagestyle{plain}
- \null\vfil
- {\noindent\huge\bfseries\authorshipname\par\vspace{10pt}}
- }{}
-}
-
-%----------------------------------------------------------------------------------------
-% DEDICATION PAGE DESIGN
-%----------------------------------------------------------------------------------------
-
-\ifbool{consistentlayout}{
- \DeclareDocumentCommand{\dedicatory}{
- m O{\vspace*{.7\textheight} } }{
- \checktoopen\tttypeout{Dedicatory}
- \markboth{}{}
- #2
- {\hfill\parbox{.4\textwidth}{\flushright#1\par}}
- }
-}{
- \newcommand\dedicatory[1]{
- \checktoopen
- \tttypeout{Dedicatory}
- \null\vfil
- \thispagestyle{plain}
- \begin{center}{\Large\slshape #1}\end{center}
- \vfil\null
- }
-}
-
-
-%----------------------------------------------------------------------------------------
-% PHYSICAL CONSTANTS PAGE DESIGN
-%----------------------------------------------------------------------------------------
-
-\newcommand{\constantsname}{Physical Constants}
-\providecaptionname{english,british,american}{\constantsname}{Physical Constants}
-\providecaptionname{ngerman,german,austrian,naustrian}{\constantsname}{Physikalische Konstanten}
-
-\NewDocumentEnvironment{constants}{ m }{%
- \ifbool{nolistspace}{\begingroup\singlespacing}{}
- \ifbool{listtoc}{\addchap{\constantsname}}{\addchap*{\constantsname}}
- \begin{longtable}{#1}
- }{%
- \end{longtable}
- \addtocounter{table}{-1}% Don't count this table as one of the document tables
- \ifbool{nolistspace}{\endgroup}{}
-}
-
-%----------------------------------------------------------------------------------------
-% SYMBOLS PAGE DESIGN
-%----------------------------------------------------------------------------------------
-
-\newcommand{\symbolsname}{List of Symbols}
-\providecaptionname{english,british,american}{\symbolsname}{List of Symbols}
-\providecaptionname{ngerman,german,austrian,naustrian}{\symbolsname}{Symbolverzeichnis}
-
-\NewDocumentEnvironment{symbols}{ m }{%
- \ifbool{nolistspace}{\begingroup\singlespacing}{}
- \ifbool{listtoc}{\addchap{\symbolsname}}{\addchap*{\symbolsname}}
- \begin{longtable}{#1}
- }{%
- \end{longtable}
- \addtocounter{table}{-1}% Don't count this table as one of the document tables
- \ifbool{nolistspace}{\endgroup}{}
-}
-
-%----------------------------------------------------------------------------------------
-
-\ifbool{hyperrefsupport}{% If the nohyperref class option has not been specified
-\AtEndPreamble{\RequirePackage{hyperref}
-\hypersetup{pdfpagemode={UseOutlines},
-bookmarksopen=true,
-bookmarksopenlevel=0,
-hypertexnames=false,
-colorlinks=true,% Set to false to disable coloring links
-citecolor=magenta,% The color of citations
-linkcolor=red,% The color of references to document elements (sections, figures, etc)
-urlcolor=mdtRed,% The color of hyperlinks (URLs)
-pdfstartview={FitV},
-unicode,
-breaklinks=true,
-}
-
-\pdfstringdefDisableCommands{% If there is an explicit linebreak in a section heading (or anything printed to the pdf-bookmarks), it is replaced by a space
- \let\\\space%
-}
- }
-}{%nothing
-}
-
-%----------------------------------------------------------------------------------------
-
-\endinput
-% lazyLizardTracer
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/bad-scala.data Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,34 +0,0 @@
-%% LaTeX2e file `bad-scala.data'
-%% generated by the `filecontents' environment
-%% from source `main' on 2022/03/16.
-%%
-1 0.048028
-2 0.126308
-3 0.169670
-4 0.264180
-5 0.384297
-6 0.612785
-7 0.817211
-8 1.089386
-9 1.363222
-10 1.644981
-11 1.987046
-12 2.416012
-13 2.920956
-14 3.398956
-15 3.739649
-16 4.329977
-17 4.932896
-18 5.633909
-19 6.436107
-20 6.927233
-21 7.441163
-22 8.242139
-23 8.901034
-24 9.680487
-25 10.496226
-26 11.385733
-27 12.247613
-28 13.990491
-29 14.245804
-30 15.206283
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/data.sty Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,123 +0,0 @@
-% The data files, written on the first run.
-
-
-\begin{filecontents}{re-python2.data}
-1 0.033
-5 0.036
-10 0.034
-15 0.036
-18 0.059
-19 0.084
-20 0.141
-21 0.248
-22 0.485
-23 0.878
-24 1.71
-25 3.40
-26 7.08
-27 14.12
-28 26.69
-\end{filecontents}
-
-
-% JavaScript, example (a*)*b
-\begin{filecontents}{re-js.data}
-5 0.061
-10 0.061
-15 0.061
-20 0.070
-23 0.131
-25 0.308
-26 0.564
-28 1.994
-30 7.648
-31 15.881
-32 32.190
-\end{filecontents}
-
-% Java 8, example (a*)*b
-\begin{filecontents}{re-java.data}
-5 0.00298
-10 0.00418
-15 0.00996
-16 0.01710
-17 0.03492
-18 0.03303
-19 0.05084
-20 0.10177
-21 0.19960
-22 0.41159
-23 0.82234
-24 1.70251
-25 3.36112
-26 6.63998
-27 13.35120
-28 29.81185
-\end{filecontents}
-
-% Java, example (a*)b
-\begin{filecontents}{good-java.data}
-1 1.5633E-5
-2 1.299E-5
-3 1.1451E-5
-4 1.5846E-5
-5 1.9934E-5
-6 2.174E-5
-7 2.7669E-5
-8 2.8657E-5
-9 2.8161E-5
-10 2.8729E-5
-11 3.5367E-5
-12 3.701E-5
-13 3.84E-5
-14 4.1329E-5
-15 4.8116E-5
-16 5.3597E-5
-17 4.6792E-5
-18 5.8618E-5
-19 6.2078E-5
-20 6.4702E-5
-21 6.1464E-5
-22 6.4693E-5
-23 6.1667E-5
-24 7.1466E-5
-25 7.8089E-5
-26 7.4661E-5
-27 7.5628E-5
-28 8.9169E-5
-29 9.4161E-5
-30 9.8494E-5
-\end{filecontents}
-
-\begin{filecontents}{bad-scala.data}
-1 0.048028
-2 0.126308
-3 0.169670
-4 0.264180
-5 0.384297
-6 0.612785
-7 0.817211
-8 1.089386
-9 1.363222
-10 1.644981
-11 1.987046
-12 2.416012
-13 2.920956
-14 3.398956
-15 3.739649
-16 4.329977
-17 4.932896
-18 5.633909
-19 6.436107
-20 6.927233
-21 7.441163
-22 8.242139
-23 8.901034
-24 9.680487
-25 10.496226
-26 11.385733
-27 12.247613
-28 13.990491
-29 14.245804
-30 15.206283
-\end{filecontents}
\ No newline at end of file
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/example.bib Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,376 +0,0 @@
-%% This BibTeX bibliography file was created using BibDesk.
-%% https://bibdesk.sourceforge.io/
-
-%% Created for CS TAN at 2022-03-16 16:38:47 +0000
-
-
-%% Saved with string encoding Unicode (UTF-8)
-
-@article{Rathnayake2014StaticAF,
- title={Static Analysis for Regular Expression Exponential Runtime via Substructural Logics},
- author={Asiri Rathnayake and Hayo Thielecke},
- journal={ArXiv,
- year={2014},
- volume={abs/1405.7058}
-}
-
-@inproceedings{RibeiroAgda2017,
- abstract = {We describe the formalization of a regular expression (RE) parsing algorithm that produces a bit representation of its parse tree in the dependently typed language Agda. The algorithm computes bit-codes using Brzozowski derivatives and we prove that produced codes are equivalent to parse trees ensuring soundness and completeness w.r.t an inductive RE semantics. We include the certified algorithm in a tool developed by us, named verigrep, for regular expression based search in the style of the well known GNU grep. Practical experiments conducted with this tool are reported.},
- address = {New York, NY, USA},
- articleno = {4},
- author = {Ribeiro, Rodrigo and Bois, Andr\'{e} Du},
- booktitle = {Proceedings of the 21st Brazilian Symposium on Programming Languages},
- date-modified = {2022-03-16 16:38:47 +0000},
- doi = {10.1145/3125374.3125381},
- isbn = {9781450353892},
- keywords = {Certified algorithms, regular expressions, dependent types, bit-codes},
- location = {Fortaleza, CE, Brazil},
- numpages = {8},
- publisher = {Association for Computing Machinery},
- series = {SBLP 2017},
- title = {Certified Bit-Coded Regular Expression Parsing},
- url = {https://doi.org/10.1145/3125374.3125381},
- year = {2017},
- bdsk-url-1 = {https://doi.org/10.1145/3125374.3125381}}
-
-@article{Thompson_1968,
- author = {Ken Thompson},
- date-added = {2022-02-23 13:44:42 +0000},
- date-modified = {2022-02-23 13:44:42 +0000},
- doi = {10.1145/363347.363387},
- journal = {Communications of the {ACM}},
- month = {jun},
- number = {6},
- pages = {419--422},
- publisher = {Association for Computing Machinery ({ACM})},
- title = {Programming Techniques: Regular expression search algorithm},
- url = {https://doi.org/10.1145%2F363347.363387},
- volume = {11},
- year = 1968,
- bdsk-url-1 = {https://doi.org/10.1145%2F363347.363387},
- bdsk-url-2 = {https://doi.org/10.1145/363347.363387}}
-
-@article{17Bir,
- author = {Asiri Rathnayake and Hayo Thielecke},
- date-added = {2019-08-18 17:57:30 +0000},
- date-modified = {2019-08-18 18:00:13 +0000},
- journal = {arXiv:1405.7058},
- title = {Static Analysis for Regular Expression Exponential Runtime via Substructural Logics},
- year = {2017}}
-
-@article{nielson11bcre,
- author = {Lasse Nielsen, Fritz Henglein},
- date-added = {2019-07-03 21:09:39 +0000},
- date-modified = {2019-07-03 21:17:33 +0000},
- journal = {LATA},
- title = {Bit-coded Regular Expression Parsing},
- year = {2011},
- bdsk-file-1 = {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}}
-
-@misc{SE16,
- author = {StackStatus},
- date-added = {2019-06-26 11:28:41 +0000},
- date-modified = {2019-06-26 16:07:31 +0000},
- keywords = {ReDos Attack},
- month = {July},
- rating = {5},
- read = {1},
- title = {Stack Overflow Outage Postmortem},
- url = {https://stackstatus.net/post/147710624694/outage-postmortem-july-20-2016},
- year = {2016},
- bdsk-url-1 = {https://stackstatus.net/post/147710624694/outage-postmortem-july-20-2016}}
-
-@article{HosoyaVouillonPierce2005,
- author = {H.~Hosoya and J.~Vouillon and B.~C.~Pierce},
- journal = {ACM Transactions on Programming Languages and Systems (TOPLAS)},
- number = 1,
- pages = {46--90},
- title = {{R}egular {E}xpression {T}ypes for {XML}},
- volume = 27,
- year = {2005}}
-
-@misc{POSIX,
- note = {\url{http://pubs.opengroup.org/onlinepubs/009695399/basedefs/xbd_chap09.html}},
- title = {{T}he {O}pen {G}roup {B}ase {S}pecification {I}ssue 6 {IEEE} {S}td 1003.1 2004 {E}dition},
- year = {2004}}
-
-@inproceedings{AusafDyckhoffUrban2016,
- author = {F.~Ausaf and R.~Dyckhoff and C.~Urban},
- booktitle = {Proc.~of the 7th International Conference on Interactive Theorem Proving (ITP)},
- pages = {69--86},
- series = {LNCS},
- title = {{POSIX} {L}exing with {D}erivatives of {R}egular {E}xpressions ({P}roof {P}earl)},
- volume = {9807},
- year = {2016}}
-
-@article{aduAFP16,
- author = {F.~Ausaf and R.~Dyckhoff and C.~Urban},
- issn = {2150-914x},
- journal = {Archive of Formal Proofs},
- note = {\url{http://www.isa-afp.org/entries/Posix-Lexing.shtml}, Formal proof development},
- title = {{POSIX} {L}exing with {D}erivatives of {R}egular {E}xpressions},
- year = 2016}
-
-@techreport{CrashCourse2014,
- annote = {draft report},
- author = {N.~B.~B.~Grathwohl and F.~Henglein and U.~T.~Rasmussen},
- institution = {University of Copenhagen},
- title = {{A} {C}rash-{C}ourse in {R}egular {E}xpression {P}arsing and {R}egular {E}xpressions as {T}ypes},
- year = {2014}}
-
-@inproceedings{Sulzmann2014,
- author = {M.~Sulzmann and K.~Lu},
- booktitle = {Proc.~of the 12th International Conference on Functional and Logic Programming (FLOPS)},
- pages = {203--220},
- series = {LNCS},
- title = {{POSIX} {R}egular {E}xpression {P}arsing with {D}erivatives},
- volume = {8475},
- year = {2014}}
-
-@inproceedings{Sulzmann2014b,
- author = {M.~Sulzmann and P.~van Steenhoven},
- booktitle = {Proc.~of the 23rd International Conference on Compiler Construction (CC)},
- pages = {174--191},
- series = {LNCS},
- title = {{A} {F}lexible and {E}fficient {ML} {L}exer {T}ool {B}ased on {E}xtended {R}egular {E}xpression {S}ubmatching},
- volume = {8409},
- year = {2014}}
-
-@book{Pierce2015,
- author = {B.~C.~Pierce and C.~Casinghino and M.~Gaboardi and M.~Greenberg and C.~Hri\c{t}cu and V.~Sj\"{o}berg and B.~Yorgey},
- note = {\url{http://www.cis.upenn.edu/~bcpierce/sf}},
- publisher = {Electronic textbook},
- title = {{S}oftware {F}oundations},
- year = {2015}}
-
-@misc{Kuklewicz,
- author = {C.~Kuklewicz},
- howpublished = {\url{https://wiki.haskell.org/Regex_Posix}},
- title = {{R}egex {P}osix}}
-
-@article{Vansummeren2006,
- author = {S.~Vansummeren},
- journal = {ACM Transactions on Programming Languages and Systems},
- number = {3},
- pages = {389--428},
- title = {{T}ype {I}nference for {U}nique {P}attern {M}atching},
- volume = {28},
- year = {2006}}
-
-@inproceedings{Asperti12,
- author = {A.~Asperti},
- booktitle = {Proc.~of the 3rd International Conference on Interactive Theorem Proving (ITP)},
- pages = {283--298},
- series = {LNCS},
- title = {{A} {C}ompact {P}roof of {D}ecidability for {R}egular {E}xpression {E}quivalence},
- volume = {7406},
- year = {2012}}
-
-@inproceedings{Frisch2004,
- author = {A.~Frisch and L.~Cardelli},
- booktitle = {Proc.~of the 31st International Conference on Automata, Languages and Programming (ICALP)},
- pages = {618--629},
- series = {LNCS},
- title = {{G}reedy {R}egular {E}xpression {M}atching},
- volume = {3142},
- year = {2004}}
-
-@article{Antimirov95,
- author = {V.~Antimirov},
- journal = {Theoretical Computer Science},
- pages = {291--319},
- title = {{P}artial {D}erivatives of {R}egular {E}xpressions and {F}inite {A}utomata {C}onstructions},
- volume = {155},
- year = {1995}}
-
-@inproceedings{Nipkow98,
- author = {T.~Nipkow},
- booktitle = {Proc.~of the 11th International Conference on Theorem Proving in Higher Order Logics (TPHOLs)},
- pages = {1--15},
- series = {LNCS},
- title = {{V}erified {L}exical {A}nalysis},
- volume = 1479,
- year = 1998}
-
-@article{Brzozowski1964,
- author = {J.~A.~Brzozowski},
- journal = {Journal of the {ACM}},
- number = {4},
- pages = {481--494},
- title = {{D}erivatives of {R}egular {E}xpressions},
- volume = {11},
- year = {1964}}
-
-@article{Leroy2009,
- author = {X.~Leroy},
- journal = {Communications of the ACM},
- number = 7,
- pages = {107--115},
- title = {{F}ormal {V}erification of a {R}ealistic {C}ompiler},
- volume = 52,
- year = 2009}
-
-@inproceedings{Paulson2015,
- author = {L.~C.~Paulson},
- booktitle = {Proc.~of the 25th International Conference on Automated Deduction (CADE)},
- pages = {231--245},
- series = {LNAI},
- title = {{A} {F}ormalisation of {F}inite {A}utomata {U}sing {H}ereditarily {F}inite {S}ets},
- volume = {9195},
- year = {2015}}
-
-@article{Wu2014,
- author = {C.~Wu and X.~Zhang and C.~Urban},
- journal = {Journal of Automatic Reasoning},
- number = {4},
- pages = {451--480},
- title = {{A} {F}ormalisation of the {M}yhill-{N}erode {T}heorem based on {R}egular {E}xpressions},
- volume = {52},
- year = {2014}}
-
-@inproceedings{Regehr2011,
- author = {X.~Yang and Y.~Chen and E.~Eide and J.~Regehr},
- booktitle = {Proc.~of the 32nd ACM SIGPLAN Conference on Programming Language Design and Implementation (PLDI)},
- pages = {283--294},
- title = {{F}inding and {U}nderstanding {B}ugs in {C} {C}ompilers},
- year = {2011}}
-
-@article{Norrish2014,
- author = {A.~Barthwal and M.~Norrish},
- journal = {Journal of Computer and System Sciences},
- number = {2},
- pages = {346--362},
- title = {{A} {M}echanisation of {S}ome {C}ontext-{F}ree {L}anguage {T}heory in {HOL4}},
- volume = {80},
- year = {2014}}
-
-@article{Thompson1968,
- author = {K.~Thompson},
- issue_date = {June 1968},
- journal = {Communications of the ACM},
- number = {6},
- pages = {419--422},
- title = {{P}rogramming {T}echniques: {R}egular {E}xpression {S}earch {A}lgorithm},
- volume = {11},
- year = {1968}}
-
-@article{Owens2009,
- author = {S.~Owens and J.~H.~Reppy and A.~Turon},
- journal = {Journal of Functinal Programming},
- number = {2},
- pages = {173--190},
- title = {{R}egular-{E}xpression {D}erivatives {R}e-{E}xamined},
- volume = {19},
- year = {2009}}
-
-@inproceedings{Sulzmann2015,
- author = {M.~Sulzmann and P.~Thiemann},
- booktitle = {Proc.~of the 9th International Conference on Language and Automata Theory and Applications (LATA)},
- pages = {275--286},
- series = {LNCS},
- title = {{D}erivatives for {R}egular {S}huffle {E}xpressions},
- volume = {8977},
- year = {2015}}
-
-@inproceedings{Chen2012,
- author = {H.~Chen and S.~Yu},
- booktitle = {Proc.~in the International Workshop on Theoretical Computer Science (WTCS)},
- pages = {343--356},
- series = {LNCS},
- title = {{D}erivatives of {R}egular {E}xpressions and an {A}pplication},
- volume = {7160},
- year = {2012}}
-
-@article{Krauss2011,
- author = {A.~Krauss and T.~Nipkow},
- journal = {Journal of Automated Reasoning},
- pages = {95--106},
- title = {{P}roof {P}earl: {R}egular {E}xpression {E}quivalence and {R}elation {A}lgebra},
- volume = 49,
- year = 2012}
-
-@inproceedings{Traytel2015,
- author = {D.~Traytel},
- booktitle = {Proc.~of the 24th Annual Conference on Computer Science Logic (CSL)},
- pages = {487--503},
- series = {LIPIcs},
- title = {{A} {C}oalgebraic {D}ecision {P}rocedure for {WS1S}},
- volume = {41},
- year = {2015}}
-
-@inproceedings{Traytel2013,
- author = {D.~Traytel and T.~Nipkow},
- booktitle = {Proc.~of the 18th ACM SIGPLAN International Conference on Functional Programming (ICFP)},
- pages = {3-12},
- title = {{A} {V}erified {D}ecision {P}rocedure for {MSO} on {W}ords {B}ased on {D}erivatives of {R}egular {E}xpressions},
- year = 2013}
-
-@inproceedings{Coquand2012,
- author = {T.~Coquand and V.~Siles},
- booktitle = {Proc.~of the 1st International Conference on Certified Programs and Proofs (CPP)},
- pages = {119--134},
- series = {LNCS},
- title = {{A} {D}ecision {P}rocedure for {R}egular {E}xpression {E}quivalence in {T}ype {T}heory},
- volume = {7086},
- year = {2011}}
-
-@inproceedings{Almeidaetal10,
- author = {J.~B.~Almeida and N.~Moriera and D.~Pereira and S.~M.~de Sousa},
- booktitle = {Proc.~of the 15th International Conference on Implementation and Application of Automata (CIAA)},
- pages = {59-68},
- series = {LNCS},
- title = {{P}artial {D}erivative {A}utomata {F}ormalized in {C}oq},
- volume = {6482},
- year = {2010}}
-
-@article{Owens2008,
- author = {S.~Owens and K.~Slind},
- journal = {Higher-Order and Symbolic Computation},
- number = {4},
- pages = {377--409},
- title = {{A}dapting {F}unctional {P}rograms to {H}igher {O}rder {L}ogic},
- volume = {21},
- year = {2008}}
-
-@article{Owens2,
- author = {S.~Owens and K.~Slind},
- bibsource = {dblp computer science bibliography, http://dblp.org},
- biburl = {http://dblp.uni-trier.de/rec/bib/journals/lisp/OwensS08},
- doi = {10.1007/s10990-008-9038-0},
- journal = {Higher-Order and Symbolic Computation},
- number = {4},
- pages = {377--409},
- timestamp = {Wed, 16 Dec 2009 13:51:02 +0100},
- title = {Adapting functional programs to higher order logic},
- url = {http://dx.doi.org/10.1007/s10990-008-9038-0},
- volume = {21},
- year = {2008},
- bdsk-url-1 = {http://dx.doi.org/10.1007/s10990-008-9038-0}}
-
-@misc{PCRE,
- title = {{PCRE - Perl Compatible Regular Expressions}},
- url = {http://www.pcre.org},
- bdsk-url-1 = {http://www.pcre.org}}
-
-@inproceedings{OkuiSuzuki2010,
- author = {S.~Okui and T.~Suzuki},
- booktitle = {Proc.~of the 15th International Conference on Implementation and Application of Automata (CIAA)},
- pages = {231--240},
- series = {LNCS},
- title = {{D}isambiguation in {R}egular {E}xpression {M}atching via {P}osition {A}utomata with {A}ugmented {T}ransitions},
- volume = {6482},
- year = {2010}}
-
-@techreport{OkuiSuzukiTech,
- author = {S.~Okui and T.~Suzuki},
- institution = {University of Aizu},
- title = {{D}isambiguation in {R}egular {E}xpression {M}atching via {P}osition {A}utomata with {A}ugmented {T}ransitions},
- year = {2013}}
-
-@inproceedings{Davis18,
- author = {J.~C.~Davis and C.~.A.~Coghlan and F.~Servant and D.~Lee},
- booktitle = {Proc.~of the 26th ACM Joint Meeting on European Software Engineering Conference and Symposium on the Foundations of Software Engineering (ESEC/FSE)},
- numpages = {11},
- pages = {246--256},
- title = {{T}he {I}mpact of {R}egular {E}xpression {D}enial of {S}ervice ({ReDoS}) in {P}ractice: {A}n {E}mpirical {S}tudy at the {E}cosystem {S}cale},
- year = {2018}}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/exampletemplate.bib Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,40 +0,0 @@
-@article{Reference1,
- Abstract = {We have developed an enhanced Littrow configuration extended cavity diode laser (ECDL) that can be tuned without changing the direction of the output beam. The output of a conventional Littrow ECDL is reflected from a plane mirror fixed parallel to the tuning diffraction grating. Using a free-space Michelson wavemeter to measure the laser wavelength, we can tune the laser over a range greater than 10 nm without any alteration of alignment.},
- Author = {C. J. Hawthorn and K. P. Weber and R. E. Scholten},
- Journal = {Review of Scientific Instruments},
- Month = {12},
- Number = {12},
- Numpages = {3},
- Pages = {4477--4479},
- Title = {Littrow Configuration Tunable External Cavity Diode Laser with Fixed Direction Output Beam},
- Volume = {72},
- Url = {http://link.aip.org/link/?RSI/72/4477/1},
- Year = {2001}}
-
-@article{Reference3,
- Abstract = {Operating a laser diode in an extended cavity which provides frequency-selective feedback is a very effective method of reducing the laser's linewidth and improving its tunability. We have developed an extremely simple laser of this type, built from inexpensive commercial components with only a few minor modifications. A 780~nm laser built to this design has an output power of 80~mW, a linewidth of 350~kHz, and it has been continuously locked to a Doppler-free rubidium transition for several days.},
- Author = {A. S. Arnold and J. S. Wilson and M. G. Boshier and J. Smith},
- Journal = {Review of Scientific Instruments},
- Month = {3},
- Number = {3},
- Numpages = {4},
- Pages = {1236--1239},
- Title = {A Simple Extended-Cavity Diode Laser},
- Volume = {69},
- Url = {http://link.aip.org/link/?RSI/69/1236/1},
- Year = {1998}}
-
-@article{Reference2,
- Abstract = {We present a review of the use of diode lasers in atomic physics with an extensive list of references. We discuss the relevant characteristics of diode lasers and explain how to purchase and use them. We also review the various techniques that have been used to control and narrow the spectral outputs of diode lasers. Finally we present a number of examples illustrating the use of diode lasers in atomic physics experiments. Review of Scientific Instruments is copyrighted by The American Institute of Physics.},
- Author = {Carl E. Wieman and Leo Hollberg},
- Journal = {Review of Scientific Instruments},
- Keywords = {Diode Laser},
- Month = {1},
- Number = {1},
- Numpages = {20},
- Pages = {1--20},
- Title = {Using Diode Lasers for Atomic Physics},
- Volume = {62},
- Url = {http://link.aip.org/link/?RSI/62/1/1},
- Year = {1991}}
-
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/good-java.data Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,34 +0,0 @@
-%% LaTeX2e file `good-java.data'
-%% generated by the `filecontents' environment
-%% from source `main' on 2022/03/16.
-%%
-1 1.5633E-5
-2 1.299E-5
-3 1.1451E-5
-4 1.5846E-5
-5 1.9934E-5
-6 2.174E-5
-7 2.7669E-5
-8 2.8657E-5
-9 2.8161E-5
-10 2.8729E-5
-11 3.5367E-5
-12 3.701E-5
-13 3.84E-5
-14 4.1329E-5
-15 4.8116E-5
-16 5.3597E-5
-17 4.6792E-5
-18 5.8618E-5
-19 6.2078E-5
-20 6.4702E-5
-21 6.1464E-5
-22 6.4693E-5
-23 6.1667E-5
-24 7.1466E-5
-25 7.8089E-5
-26 7.4661E-5
-27 7.5628E-5
-28 8.9169E-5
-29 9.4161E-5
-30 9.8494E-5
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/graphic.sty Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,12 +0,0 @@
-\usepackage{tikz}
-%\usepackage{pgf}
-%\usetikzlibrary{positioning}
-%\usetikzlibrary{calc}
-%\usetikzlibrary{automata}
-%\usetikzlibrary{arrows}
-%\usetikzlibrary{backgrounds}
-%\usetikzlibrary{fit}
-%\usepackage{tikz-qtree}
-\usepackage{pgfplots}
-
-%\pgfplotsset{compat=1.15}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main-blx.bib Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,11 +0,0 @@
-@Comment{$ biblatex control file $}
-@Comment{$ biblatex version 2.9 $}
-Do not modify this file!
-
-This is an auxiliary file used by the 'biblatex' package.
-This file may safely be deleted. It will be recreated as
-required.
-
-@Control{biblatex-control,
- options = {2.9:0:0:1:0:1:1:0:0:1:0:2:3:1:79:+:nyt},
-}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.aux Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,114 +0,0 @@
-\relax
-\providecommand\hyper@newdestlabel[2]{}
-\providecommand\HyperFirstAtBeginDocument{\AtBeginDocument}
-\HyperFirstAtBeginDocument{\ifx\hyper@anchor\@undefined
-\global\let\oldcontentsline\contentsline
-\gdef\contentsline#1#2#3#4{\oldcontentsline{#1}{#2}{#3}}
-\global\let\oldnewlabel\newlabel
-\gdef\newlabel#1#2{\newlabelxx{#1}#2}
-\gdef\newlabelxx#1#2#3#4#5#6{\oldnewlabel{#1}{{#2}{#3}}}
-\AtEndDocument{\ifx\hyper@anchor\@undefined
-\let\contentsline\oldcontentsline
-\let\newlabel\oldnewlabel
-\fi}
-\fi}
-\global\let\hyper@last\relax
-\gdef\HyperFirstAtBeginDocument#1{#1}
-\providecommand\HyField@AuxAddToFields[1]{}
-\providecommand\HyField@AuxAddToCoFields[2]{}
-\bibstyle{biblatex}
-\bibdata{main-blx,example}
-\citation{biblatex-control}
-\abx@aux@refcontext{nyt/global//global/global}
-\@writefile{toc}{\boolfalse {citerequest}\boolfalse {citetracker}\boolfalse {pagetracker}\boolfalse {backtracker}\relax }
-\@writefile{lof}{\boolfalse {citerequest}\boolfalse {citetracker}\boolfalse {pagetracker}\boolfalse {backtracker}\relax }
-\@writefile{lot}{\boolfalse {citerequest}\boolfalse {citetracker}\boolfalse {pagetracker}\boolfalse {backtracker}\relax }
-\babel@aux{english}{}
-\@writefile{toc}{\contentsline {chapter}{Declaration of Authorship}{iii}{section*.1}}
-\@writefile{toc}{\contentsline {chapter}{Abstract}{vii}{section*.2}}
-\@writefile{toc}{\contentsline {chapter}{Acknowledgements}{ix}{section*.3}}
-\gdef \LT@i {\LT@entry
- {1}{66.74977pt}\LT@entry
- {1}{127.90416pt}}
-\gdef \LT@ii {\LT@entry
- {1}{82.51714pt}\LT@entry
- {1}{30.45663pt}\LT@entry
- {1}{154.48697pt}}
-\gdef \LT@iii {\LT@entry
- {1}{20.63945pt}\LT@entry
- {1}{100.58446pt}\LT@entry
- {1}{54.27406pt}}
-\@input{Chapters/Chapter1.aux}
-\citation{Brzozowski1964}
-\abx@aux@cite{Brzozowski1964}
-\abx@aux@segm{0}{0}{Brzozowski1964}
-\abx@aux@page{1}{4}
-\citation{Sulzmann2014}
-\abx@aux@cite{Sulzmann2014}
-\abx@aux@segm{0}{0}{Sulzmann2014}
-\citation{AusafDyckhoffUrban2016}
-\abx@aux@cite{AusafDyckhoffUrban2016}
-\abx@aux@segm{0}{0}{AusafDyckhoffUrban2016}
-\citation{Sulzmann2014}
-\abx@aux@segm{0}{0}{Sulzmann2014}
-\citation{Sulzmann2014}
-\abx@aux@segm{0}{0}{Sulzmann2014}
-\citation{AusafDyckhoffUrban2016}
-\abx@aux@segm{0}{0}{AusafDyckhoffUrban2016}
-\citation{AusafDyckhoffUrban2016}
-\abx@aux@segm{0}{0}{AusafDyckhoffUrban2016}
-\citation{Sulzmann2014}
-\abx@aux@segm{0}{0}{Sulzmann2014}
-\citation{Sulzmann2014}
-\abx@aux@segm{0}{0}{Sulzmann2014}
-\citation{Rathnayake2014StaticAF}
-\abx@aux@cite{Rathnayake2014StaticAF}
-\abx@aux@segm{0}{0}{Rathnayake2014StaticAF}
-\citation{Weideman2017Static}
-\abx@aux@cite{Weideman2017Static}
-\abx@aux@segm{0}{0}{Weideman2017Static}
-\citation{Brzozowski1964}
-\abx@aux@segm{0}{0}{Brzozowski1964}
-\citation{Owens2008}
-\abx@aux@cite{Owens2008}
-\abx@aux@segm{0}{0}{Owens2008}
-\citation{Krauss2011}
-\abx@aux@cite{Krauss2011}
-\abx@aux@segm{0}{0}{Krauss2011}
-\citation{Coquand2012}
-\abx@aux@cite{Coquand2012}
-\abx@aux@segm{0}{0}{Coquand2012}
-\citation{RibeiroAgda2017}
-\abx@aux@cite{RibeiroAgda2017}
-\abx@aux@segm{0}{0}{RibeiroAgda2017}
-\abx@aux@page{2}{15}
-\abx@aux@page{3}{15}
-\abx@aux@page{4}{15}
-\abx@aux@page{5}{16}
-\abx@aux@page{6}{16}
-\citation{Reference1}
-\abx@aux@cite{Reference1}
-\abx@aux@segm{0}{0}{Reference1}
-\citation{Reference2}
-\abx@aux@cite{Reference2}
-\abx@aux@segm{0}{0}{Reference2}
-\citation{Reference1}
-\abx@aux@segm{0}{0}{Reference1}
-\citation{Reference3}
-\abx@aux@cite{Reference3}
-\abx@aux@segm{0}{0}{Reference3}
-\@input{Chapters/Chapter2.aux}
-\@input{Chapters/Chapter3.aux}
-\@input{Appendices/AppendixA.aux}
-\abx@aux@refcontextdefaultsdone
-\abx@aux@defaultrefcontext{0}{Brzozowski1964}{nyt/global//global/global}
-\abx@aux@defaultrefcontext{0}{Coquand2012}{nyt/global//global/global}
-\abx@aux@defaultrefcontext{0}{Krauss2011}{nyt/global//global/global}
-\abx@aux@defaultrefcontext{0}{Owens2008}{nyt/global//global/global}
-\abx@aux@defaultrefcontext{0}{RibeiroAgda2017}{nyt/global//global/global}
-\@writefile{toc}{\contentsline {chapter}{Bibliography}{29}{appendix*.64}}
-\abx@aux@page{7}{29}
-\abx@aux@page{8}{29}
-\abx@aux@page{9}{29}
-\abx@aux@page{10}{29}
-\abx@aux@page{11}{29}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.bbl Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,197 +0,0 @@
-% $ biblatex auxiliary file $
-% $ biblatex bbl format version 2.9 $
-% Do not modify the above lines!
-%
-% This is an auxiliary file used by the 'biblatex' package.
-% This file may safely be deleted. It will be recreated as
-% required.
-%
-\begingroup
-\makeatletter
-\@ifundefined{ver@biblatex.sty}
- {\@latex@error
- {Missing 'biblatex' package}
- {The bibliography requires the 'biblatex' package.}
- \aftergroup\endinput}
- {}
-\endgroup
-
-\datalist[entry]{nyt/global//global/global}
- \entry{Brzozowski1964}{article}{}
- \name{author}{1}{}{%
- {{hash=BJA}{%
- family={Brzozowski},
- familyi={B\bibinitperiod},
- given={J.\bibnamedelima A.},
- giveni={J\bibinitperiod\bibinitdelim A\bibinitperiod},
- }}%
- }
- \strng{namehash}{BJA1}
- \strng{fullhash}{BJA1}
- \field{labelnamesource}{author}
- \field{labeltitlesource}{title}
- \field{labelyear}{1964}
- \field{labeldatesource}{year}
- \field{sortinit}{B}
- \field{sortinithash}{B}
- \field{number}{4}
- \field{pages}{481\bibrangedash 494}
- \field{title}{{D}erivatives of {R}egular {E}xpressions}
- \field{volume}{11}
- \field{journaltitle}{Journal of the {ACM}}
- \field{year}{1964}
- \endentry
-
- \entry{Coquand2012}{inproceedings}{}
- \name{author}{2}{}{%
- {{hash=CT}{%
- family={Coquand},
- familyi={C\bibinitperiod},
- given={T.},
- giveni={T\bibinitperiod},
- }}%
- {{hash=SV}{%
- family={Siles},
- familyi={S\bibinitperiod},
- given={V.},
- giveni={V\bibinitperiod},
- }}%
- }
- \strng{namehash}{CTSV1}
- \strng{fullhash}{CTSV1}
- \field{labelnamesource}{author}
- \field{labeltitlesource}{title}
- \field{labelyear}{2011}
- \field{labeldatesource}{year}
- \field{sortinit}{C}
- \field{sortinithash}{C}
- \field{booktitle}{Proc.~of the 1st International Conference on Certified
- Programs and Proofs (CPP)}
- \field{pages}{119\bibrangedash 134}
- \field{series}{LNCS}
- \field{title}{{A} {D}ecision {P}rocedure for {R}egular {E}xpression
- {E}quivalence in {T}ype {T}heory}
- \field{volume}{7086}
- \field{year}{2011}
- \endentry
-
- \entry{Krauss2011}{article}{}
- \name{author}{2}{}{%
- {{hash=KA}{%
- family={Krauss},
- familyi={K\bibinitperiod},
- given={A.},
- giveni={A\bibinitperiod},
- }}%
- {{hash=NT}{%
- family={Nipkow},
- familyi={N\bibinitperiod},
- given={T.},
- giveni={T\bibinitperiod},
- }}%
- }
- \strng{namehash}{KANT1}
- \strng{fullhash}{KANT1}
- \field{labelnamesource}{author}
- \field{labeltitlesource}{title}
- \field{labelyear}{2012}
- \field{labeldatesource}{year}
- \field{sortinit}{K}
- \field{sortinithash}{K}
- \field{pages}{95\bibrangedash 106}
- \field{title}{{P}roof {P}earl: {R}egular {E}xpression {E}quivalence and
- {R}elation {A}lgebra}
- \field{volume}{49}
- \field{journaltitle}{Journal of Automated Reasoning}
- \field{year}{2012}
- \endentry
-
- \entry{Owens2008}{article}{}
- \name{author}{2}{}{%
- {{hash=OS}{%
- family={Owens},
- familyi={O\bibinitperiod},
- given={S.},
- giveni={S\bibinitperiod},
- }}%
- {{hash=SK}{%
- family={Slind},
- familyi={S\bibinitperiod},
- given={K.},
- giveni={K\bibinitperiod},
- }}%
- }
- \strng{namehash}{OSSK1}
- \strng{fullhash}{OSSK1}
- \field{labelnamesource}{author}
- \field{labeltitlesource}{title}
- \field{labelyear}{2008}
- \field{labeldatesource}{year}
- \field{sortinit}{O}
- \field{sortinithash}{O}
- \field{number}{4}
- \field{pages}{377\bibrangedash 409}
- \field{title}{{A}dapting {F}unctional {P}rograms to {H}igher {O}rder
- {L}ogic}
- \field{volume}{21}
- \field{journaltitle}{Higher-Order and Symbolic Computation}
- \field{year}{2008}
- \endentry
-
- \entry{RibeiroAgda2017}{inproceedings}{}
- \name{author}{2}{}{%
- {{hash=RR}{%
- family={Ribeiro},
- familyi={R\bibinitperiod},
- given={Rodrigo},
- giveni={R\bibinitperiod},
- }}%
- {{hash=BAD}{%
- family={Bois},
- familyi={B\bibinitperiod},
- given={Andr\'{e}\bibnamedelima Du},
- giveni={A\bibinitperiod\bibinitdelim D\bibinitperiod},
- }}%
- }
- \list{publisher}{1}{%
- {Association for Computing Machinery}%
- }
- \keyw{Certified algorithms, regular expressions, dependent types,
- bit-codes}
- \strng{namehash}{RRBAD1}
- \strng{fullhash}{RRBAD1}
- \field{labelnamesource}{author}
- \field{labeltitlesource}{title}
- \field{labelyear}{2017}
- \field{labeldatesource}{year}
- \field{sortinit}{R}
- \field{sortinithash}{R}
- \field{abstract}{%
- We describe the formalization of a regular expression (RE) parsing
- algorithm that produces a bit representation of its parse tree in the
- dependently typed language Agda. The algorithm computes bit-codes using
- Brzozowski derivatives and we prove that produced codes are equivalent to
- parse trees ensuring soundness and completeness w.r.t an inductive RE
- semantics. We include the certified algorithm in a tool developed by us,
- named verigrep, for regular expression based search in the style of the well
- known GNU grep. Practical experiments conducted with this tool are reported.%
- }
- \field{booktitle}{Proceedings of the 21st Brazilian Symposium on
- Programming Languages}
- \verb{doi}
- \verb 10.1145/3125374.3125381
- \endverb
- \field{isbn}{9781450353892}
- \field{series}{SBLP 2017}
- \field{title}{Certified Bit-Coded Regular Expression Parsing}
- \verb{url}
- \verb https://doi.org/10.1145/3125374.3125381
- \endverb
- \list{location}{1}{%
- {Fortaleza, CE, Brazil}%
- }
- \field{year}{2017}
- \warn{\item Can't use 'location' + 'address'}
- \endentry
-\enddatalist
-\endinput
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.lof Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,7 +0,0 @@
-\boolfalse {citerequest}\boolfalse {citetracker}\boolfalse {pagetracker}\boolfalse {backtracker}\relax
-\babel@toc {english}{}
-\addvspace {10\p@ }
-\contentsline {figure}{\numberline {1.1}{\ignorespaces An Electron}}{21}{figure.caption.45}
-\addvspace {10\p@ }
-\addvspace {10\p@ }
-\addvspace {10\p@ }
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.log Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,2596 +0,0 @@
-This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2018) (preloaded format=pdflatex 2019.2.7) 23 MAR 2022 14:08
-entering extended mode
- restricted \write18 enabled.
- file:line:error style messages enabled.
- %&-line parsing enabled.
-**main.tex
-(./main.tex
-LaTeX2e <2018-04-01> patch level 2
-Babel <3.18> and hyphenation patterns for 84 language(s) loaded.
-(./MastersDoctoralThesis.cls
-Document Class: MastersDoctoralThesis 2017/08/27 v1.6 LaTeXTemplates.com
-(/usr/local/texlive/2018/texmf-dist/tex/latex/etoolbox/etoolbox.sty
-Package: etoolbox 2018/02/11 v2.5e e-TeX tools for LaTeX (JAW)
-\etb@tempcnta=\count80
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/l3packages/xparse/xparse.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/l3kernel/expl3.sty
-Package: expl3 2018/03/05 L3 programming layer (loader)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/l3kernel/expl3-code.tex
-Package: expl3 2018/03/05 L3 programming layer (code)
-\c_max_int=\count81
-\l_tmpa_int=\count82
-\l_tmpb_int=\count83
-\g_tmpa_int=\count84
-\g_tmpb_int=\count85
-\g__intarray_font_int=\count86
-\g__prg_map_int=\count87
-\c_log_iow=\count88
-\l_iow_line_count_int=\count89
-\l__iow_line_target_int=\count90
-\l__iow_one_indent_int=\count91
-\l__iow_indent_int=\count92
-\c_zero_dim=\dimen102
-\c_max_dim=\dimen103
-\l_tmpa_dim=\dimen104
-\l_tmpb_dim=\dimen105
-\g_tmpa_dim=\dimen106
-\g_tmpb_dim=\dimen107
-\c_zero_skip=\skip41
-\c_max_skip=\skip42
-\l_tmpa_skip=\skip43
-\l_tmpb_skip=\skip44
-\g_tmpa_skip=\skip45
-\g_tmpb_skip=\skip46
-\c_zero_muskip=\muskip10
-\c_max_muskip=\muskip11
-\l_tmpa_muskip=\muskip12
-\l_tmpb_muskip=\muskip13
-\g_tmpa_muskip=\muskip14
-\g_tmpb_muskip=\muskip15
-\l_keys_choice_int=\count93
-\c__fp_leading_shift_int=\count94
-\c__fp_middle_shift_int=\count95
-\c__fp_trailing_shift_int=\count96
-\c__fp_big_leading_shift_int=\count97
-\c__fp_big_middle_shift_int=\count98
-\c__fp_big_trailing_shift_int=\count99
-\c__fp_Bigg_leading_shift_int=\count100
-\c__fp_Bigg_middle_shift_int=\count101
-\c__fp_Bigg_trailing_shift_int=\count102
-\c__fp_rand_size_int=\count103
-\c__fp_rand_four_int=\count104
-\c__fp_rand_eight_int=\count105
-\l__sort_length_int=\count106
-\l__sort_min_int=\count107
-\l__sort_top_int=\count108
-\l__sort_max_int=\count109
-\l__sort_true_max_int=\count110
-\l__sort_block_int=\count111
-\l__sort_begin_int=\count112
-\l__sort_end_int=\count113
-\l__sort_A_int=\count114
-\l__sort_B_int=\count115
-\l__sort_C_int=\count116
-\l__tl_build_start_index_int=\count117
-\l__tl_build_index_int=\count118
-\l__tl_analysis_normal_int=\count119
-\l__tl_analysis_index_int=\count120
-\l__tl_analysis_nesting_int=\count121
-\l__tl_analysis_type_int=\count122
-\l__regex_internal_a_int=\count123
-\l__regex_internal_b_int=\count124
-\l__regex_internal_c_int=\count125
-\l__regex_balance_int=\count126
-\l__regex_group_level_int=\count127
-\l__regex_mode_int=\count128
-\c__regex_cs_in_class_mode_int=\count129
-\c__regex_cs_mode_int=\count130
-\l__regex_catcodes_int=\count131
-\l__regex_default_catcodes_int=\count132
-\c__regex_catcode_D_int=\count133
-\c__regex_catcode_S_int=\count134
-\c__regex_catcode_L_int=\count135
-\c__regex_catcode_O_int=\count136
-\c__regex_catcode_A_int=\count137
-\c__regex_all_catcodes_int=\count138
-\l__regex_show_lines_int=\count139
-\l__regex_min_state_int=\count140
-\l__regex_max_state_int=\count141
-\l__regex_left_state_int=\count142
-\l__regex_right_state_int=\count143
-\l__regex_capturing_group_int=\count144
-\l__regex_min_pos_int=\count145
-\l__regex_max_pos_int=\count146
-\l__regex_curr_pos_int=\count147
-\l__regex_start_pos_int=\count148
-\l__regex_success_pos_int=\count149
-\l__regex_curr_char_int=\count150
-\l__regex_curr_catcode_int=\count151
-\l__regex_last_char_int=\count152
-\l__regex_case_changed_char_int=\count153
-\l__regex_curr_state_int=\count154
-\l__regex_step_int=\count155
-\l__regex_min_active_int=\count156
-\l__regex_max_active_int=\count157
-\l__regex_replacement_csnames_int=\count158
-\l__regex_match_count_int=\count159
-\l__regex_min_submatch_int=\count160
-\l__regex_submatch_int=\count161
-\l__regex_zeroth_submatch_int=\count162
-\g__regex_trace_regex_int=\count163
-\c_empty_box=\box26
-\l_tmpa_box=\box27
-\l_tmpb_box=\box28
-\g_tmpa_box=\box29
-\g_tmpb_box=\box30
-\l__box_top_dim=\dimen108
-\l__box_bottom_dim=\dimen109
-\l__box_left_dim=\dimen110
-\l__box_right_dim=\dimen111
-\l__box_top_new_dim=\dimen112
-\l__box_bottom_new_dim=\dimen113
-\l__box_left_new_dim=\dimen114
-\l__box_right_new_dim=\dimen115
-\l__box_internal_box=\box31
-\l__coffin_internal_box=\box32
-\l__coffin_internal_dim=\dimen116
-\l__coffin_offset_x_dim=\dimen117
-\l__coffin_offset_y_dim=\dimen118
-\l__coffin_x_dim=\dimen119
-\l__coffin_y_dim=\dimen120
-\l__coffin_x_prime_dim=\dimen121
-\l__coffin_y_prime_dim=\dimen122
-\c_empty_coffin=\box33
-\l__coffin_aligned_coffin=\box34
-\l__coffin_aligned_internal_coffin=\box35
-\l_tmpa_coffin=\box36
-\l_tmpb_coffin=\box37
-\l__coffin_display_coffin=\box38
-\l__coffin_display_coord_coffin=\box39
-\l__coffin_display_pole_coffin=\box40
-\l__coffin_display_offset_dim=\dimen123
-\l__coffin_display_x_dim=\dimen124
-\l__coffin_display_y_dim=\dimen125
-\l__coffin_bounding_shift_dim=\dimen126
-\l__coffin_left_corner_dim=\dimen127
-\l__coffin_right_corner_dim=\dimen128
-\l__coffin_bottom_corner_dim=\dimen129
-\l__coffin_top_corner_dim=\dimen130
-\l__coffin_scaled_total_height_dim=\dimen131
-\l__coffin_scaled_width_dim=\dimen132
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/l3kernel/l3pdfmode.def
-File: l3pdfmode.def 2017/03/18 v L3 Experimental driver: PDF mode
-\l__driver_color_stack_int=\count164
-))
-Package: xparse 2018/02/21 L3 Experimental document command parser
-\l__xparse_current_arg_int=\count165
-\g__xparse_grabber_int=\count166
-\l__xparse_m_args_int=\count167
-\l__xparse_mandatory_args_int=\count168
-\l__xparse_v_nesting_int=\count169
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/book.cls
-Document Class: book 2014/09/29 v1.4h Standard LaTeX document class
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/bk11.clo
-File: bk11.clo 2014/09/29 v1.4h Standard LaTeX file (size option)
-)
-\c@part=\count170
-\c@chapter=\count171
-\c@section=\count172
-\c@subsection=\count173
-\c@subsubsection=\count174
-\c@paragraph=\count175
-\c@subparagraph=\count176
-\c@figure=\count177
-\c@table=\count178
-\abovecaptionskip=\skip47
-\belowcaptionskip=\skip48
-\bibindent=\dimen133
-)
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \abovechapterskip with sig. '' on line 59.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \chapterbelowskip with sig. '' on line 60.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \chapterinbetweenskip with sig. '' on line 61.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \autodot with sig. '' on line 62.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \mdtChapapp with sig. '' on line 63.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \chapteralign with sig. '' on line 64.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \chapterfont with sig. '' on line 65.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \chapterprefixfont with sig. '' on line 66.
-.................................................
-.................................................
-. LaTeX info: "xparse/redefine-command"
-.
-. Redefining command \@makechapterhead with sig. ' m ' on line 86.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \addchap with sig. ' s o m ' on line 113.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \addsec with sig. ' s o m ' on line 128.
-.................................................
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/babel/babel.sty
-Package: babel 2018/02/14 3.18 The Babel package
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/babel/switch.def
-File: switch.def 2018/02/14 3.18 Babel switching mechanism
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/babel-english/english.ldf
-Language: english 2017/06/06 v3.3r English support from the babel system
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/babel/babel.def
-File: babel.def 2018/02/14 3.18 Babel common definitions
-\babel@savecnt=\count179
-\U@D=\dimen134
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/babel/txtbabel.def)
-\bbl@dirlevel=\count180
-)
-\l@canadian = a dialect from \language\l@american
-\l@australian = a dialect from \language\l@british
-\l@newzealand = a dialect from \language\l@british
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/koma-script/scrbase.sty
-Package: scrbase 2018/03/30 v3.25 KOMA-Script package (KOMA-Script-independent
-basics and keyval usage)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics/keyval.sty
-Package: keyval 2014/10/28 v1.15 key=value parser (DPC)
-\KV@toks@=\toks14
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/koma-script/scrlfile.sty
-Package: scrlfile 2018/03/30 v3.25 KOMA-Script package (loading files)
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/koma-script/scrhack.sty
-Package: scrhack 2018/03/30 v3.25 KOMA-Script package
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/koma-script/scrkbase.sty
-Package: scrkbase 2018/03/30 v3.25 KOMA-Script package (KOMA-Script-dependent b
-asics and keyval usage)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/xpatch/xpatch.sty
-Package: xpatch 2012/10/02 v0.3 Extending etoolbox patching commands
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchcmd with sig. '' on line 125.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretocmd with sig. '' on line 126.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xapptocmd with sig. '' on line 127.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshowcmd with sig. '' on line 128.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchbibmacro with sig. 'm' on line 131.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretobibmacro with sig. 'm' on line 133.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xapptobibmacro with sig. 'm' on line 135.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshowbibmacro with sig. 'm' on line 137.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchfieldformat with sig. 'O{*}m' on line 139.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretofieldformat with sig. 'O{*}m' on line 141.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xapptofieldformat with sig. 'O{*}m' on line 143.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshowfieldformat with sig. 'O{*}m' on line 145.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchnameformat with sig. 'O{*}m' on line 147.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretonameformat with sig. 'O{*}m' on line 149.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xapptonameformat with sig. 'O{*}m' on line 151.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshownameformat with sig. 'O{*}m' on line 153.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchlistformat with sig. 'O{*}m' on line 155.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretolistformat with sig. 'O{*}m' on line 157.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xapptolistformat with sig. 'O{*}m' on line 159.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshowlistformat with sig. 'O{*}m' on line 161.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchindexfieldformat with sig. 'O{*}m' on line 163.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretoindexfieldformat with sig. 'O{*}m' on line 165.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xapptoindexfieldformat with sig. 'O{*}m' on line 167.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshowindexfieldformat with sig. 'O{*}m' on line 169.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchindexnameformat with sig. 'O{*}m' on line 171.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretoindexnameformat with sig. 'O{*}m' on line 173.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xapptoindexnameformat with sig. 'O{*}m' on line 175.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshowindexnameformat with sig. 'O{*}m' on line 177.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchindexlistformat with sig. 'O{*}m' on line 179.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretoindexlistformat with sig. 'O{*}m' on line 181.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xappindextolistformat with sig. 'O{*}m' on line 183.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshowindexlistformat with sig. 'O{*}m' on line 185.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpatchbibdriver with sig. 'm' on line 187.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xpretobibdriver with sig. 'm' on line 189.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xapptobibdriver with sig. 'm' on line 191.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \xshowbibdriver with sig. 'm' on line 193.
-.................................................
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/setspace/setspace.sty
-Package: setspace 2011/12/19 v6.7a set line spacing
-)
-Package scrhack Info: loading setspace hack on input line 193.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/koma-script/setspace.hak
-File: setspace.hak 2018/03/30 v3.25 KOMA-Script package (hacking package setspa
-ce)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/tools/longtable.sty
-Package: longtable 2014/10/28 v4.11 Multi-page Table package (DPC)
-\LTleft=\skip49
-\LTright=\skip50
-\LTpre=\skip51
-\LTpost=\skip52
-\LTchunksize=\count181
-\LTcapwidth=\dimen135
-\LT@head=\box41
-\LT@firsthead=\box42
-\LT@foot=\box43
-\LT@lastfoot=\box44
-\LT@cols=\count182
-\LT@rows=\count183
-\c@LT@tables=\count184
-\c@LT@chunks=\count185
-\LT@p@ftn=\toks15
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/siunitx/siunitx.sty
-Package: siunitx 2018-03-20 v2.7m A comprehensive (SI) units package
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/amsmath/amstext.sty
-Package: amstext 2000/06/29 v2.01 AMS text
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/amsmath/amsgen.sty
-File: amsgen.sty 1999/11/30 v2.0 generic functions
-\@emptytoks=\toks16
-\ex@=\dimen136
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/tools/array.sty
-Package: array 2018/04/07 v2.4g Tabular extension package (FMi)
-\col@sep=\dimen137
-\ar@mcellbox=\box45
-\extrarowheight=\dimen138
-\NC@list=\toks17
-\extratabsurround=\skip53
-\backup@length=\skip54
-\ar@cellbox=\box46
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/l3packages/l3keys2e/l3keys2e.sty
-Package: l3keys2e 2018/02/21 LaTeX2e option processing using LaTeX3 keys
-)
-\l__siunitx_tmp_box=\box47
-\l__siunitx_tmp_dim=\dimen139
-\l__siunitx_tmp_int=\count186
-\l__siunitx_number_mantissa_length_int=\count187
-\l__siunitx_number_uncert_length_int=\count188
-\l__siunitx_round_int=\count189
-\l__siunitx_process_decimal_int=\count190
-\l__siunitx_process_uncertainty_int=\count191
-\l__siunitx_process_fixed_int=\count192
-\l__siunitx_process_integer_min_int=\count193
-\l__siunitx_process_precision_int=\count194
-\l__siunitx_group_min_int=\count195
-\l__siunitx_angle_marker_box=\box48
-\l__siunitx_angle_unit_box=\box49
-\l__siunitx_angle_marker_dim=\dimen140
-\l__siunitx_angle_unit_dim=\dimen141
-\l__siunitx_unit_int=\count196
-\l__siunitx_unit_denominator_int=\count197
-\l__siunitx_unit_numerator_int=\count198
-\l__siunitx_unit_prefix_int=\count199
-\l__siunitx_unit_prefix_base_int=\count266
-\l__siunitx_unit_prefix_gram_int=\count267
-\l__siunitx_number_product_int=\count268
-\c__siunitx_one_fill_skip=\skip55
-\l__siunitx_table_unit_align_skip=\skip56
-\l__siunitx_table_exponent_dim=\dimen142
-\l__siunitx_table_integer_dim=\dimen143
-\l__siunitx_table_mantissa_dim=\dimen144
-\l__siunitx_table_marker_dim=\dimen145
-\l__siunitx_table_result_dim=\dimen146
-\l__siunitx_table_uncert_dim=\dimen147
-\l__siunitx_table_fill_pre_dim=\dimen148
-\l__siunitx_table_fill_post_dim=\dimen149
-\l__siunitx_table_fill_mid_dim=\dimen150
-\l__siunitx_table_pre_box=\box50
-\l__siunitx_table_post_box=\box51
-\l__siunitx_table_mantissa_box=\box52
-\l__siunitx_table_result_box=\box53
-\l__siunitx_table_number_align_skip=\skip57
-\l__siunitx_table_text_align_skip=\skip58
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \DeclareBinaryPrefix with sig. 'mmm' on line 7244.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \DeclareSIPostPower with sig. 'mm' on line 7247.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \DeclareSIPrefix with sig. 'mmm' on line 7250.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \DeclareSIPrePower with sig. 'mm' on line 7253.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \DeclareSIQualifier with sig. 'mm' on line 7256.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \DeclareSIUnit with sig. 'O{}mm' on line 7259.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \DeclareSIUnitWithOptions with sig. 'mmm' on line 7262.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \ang with sig. 'o>{\SplitArgument {2}{;}}m' on line 7277.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \num with sig. 'om' on line 7286.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \numlist with sig. 'o>{\SplitList {;}}m' on line 7295.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \numrange with sig. 'omm' on line 7304.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \SIlist with sig. 'o>{\SplitList {;}}mm' on line 7316.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \SIrange with sig. 'ommm' on line 7328.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \SI with sig. 'omom' on line 7340.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \sisetup with sig. 'm' on line 7343.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \tablenum with sig. 'om' on line 7358.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \si with sig. 'om' on line 7370.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \numInBookmark with sig. 'om' on line 7417.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \numrangeInBookmark with sig. 'omm' on line 7419.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \SIInBookmark with sig. 'omom' on line 7421.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \SIlistInBookmark with sig. 'omm' on line 7423.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \SIrangeInBookmark with sig. 'ommm' on line 7425.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \siInBookmark with sig. 'om' on line 7426.
-.................................................
-\g__file_internal_ior=\read1
-(/usr/local/texlive/2018/texmf-dist/tex/latex/translator/translator.sty
-Package: translator 2018/01/04 v1.12 Easy translation of strings in LaTeX
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics/graphicx.sty
-Package: graphicx 2017/06/01 v1.1a Enhanced LaTeX Graphics (DPC,SPQR)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics/graphics.sty
-Package: graphics 2017/06/25 v1.2c Standard LaTeX Graphics (DPC,SPQR)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics/trig.sty
-Package: trig 2016/01/03 v1.10 sin cos tan (DPC)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics-cfg/graphics.cfg
-File: graphics.cfg 2016/06/04 v1.11 sample graphics configuration
-)
-Package graphics Info: Driver file: pdftex.def on input line 99.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics-def/pdftex.def
-File: pdftex.def 2018/01/08 v1.0l Graphics/color driver for pdftex
-))
-\Gin@req@height=\dimen151
-\Gin@req@width=\dimen152
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/booktabs/booktabs.sty
-Package: booktabs 2016/04/27 v1.618033 publication quality tables
-\heavyrulewidth=\dimen153
-\lightrulewidth=\dimen154
-\cmidrulewidth=\dimen155
-\belowrulesep=\dimen156
-\belowbottomsep=\dimen157
-\aboverulesep=\dimen158
-\abovetopsep=\dimen159
-\cmidrulesep=\dimen160
-\cmidrulekern=\dimen161
-\defaultaddspace=\dimen162
-\@cmidla=\count269
-\@cmidlb=\count270
-\@aboverulesep=\dimen163
-\@belowrulesep=\dimen164
-\@thisruleclass=\count271
-\@lastruleclass=\count272
-\@thisrulewidth=\dimen165
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/caption/caption.sty
-Package: caption 2016/02/21 v3.3-144 Customizing captions (AR)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/caption/caption3.sty
-Package: caption3 2016/05/22 v1.7-166 caption3 kernel (AR)
-Package caption3 Info: TeX engine: e-TeX on input line 67.
-\captionmargin=\dimen166
-\captionmargin@=\dimen167
-\captionwidth=\dimen168
-\caption@tempdima=\dimen169
-\caption@indent=\dimen170
-\caption@parindent=\dimen171
-\caption@hangindent=\dimen172
-)
-\c@ContinuedFloat=\count273
-Package caption Info: longtable package is loaded.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/caption/ltcaption.sty
-Package: ltcaption 2013/06/09 v1.4-94 longtable captions (AR)
-))
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \thesistitle with sig. ' o m ' on line 214.
-.................................................
-.................................................
-. LaTeX info: "xparse/redefine-command"
-.
-. Redefining command \author with sig. 'm' on line 215.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \supervisor with sig. 'm' on line 216.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \examiner with sig. 'm' on line 217.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \degree with sig. 'm' on line 218.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \addresses with sig. 'm' on line 219.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \university with sig. 'm' on line 220.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \department with sig. 'm' on line 221.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \group with sig. 'm' on line 222.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \faculty with sig. 'm' on line 223.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \subject with sig. 'm' on line 224.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \keywords with sig. 'm' on line 225.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \bhrule with sig. '' on line 232.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \tttypeout with sig. 'm' on line 233.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \addchaptertocentry with sig. ' m ' on line 241.
-.................................................
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/xcolor/xcolor.sty
-Package: xcolor 2016/05/11 v2.12 LaTeX color extensions (UK)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics-cfg/color.cfg
-File: color.cfg 2016/01/02 v1.6 sample color configuration
-)
-Package xcolor Info: Driver file: pdftex.def on input line 225.
-Package xcolor Info: Model `cmy' substituted by `cmy0' on input line 1348.
-Package xcolor Info: Model `hsb' substituted by `rgb' on input line 1352.
-Package xcolor Info: Model `RGB' extended on input line 1364.
-Package xcolor Info: Model `HTML' substituted by `rgb' on input line 1366.
-Package xcolor Info: Model `Hsb' substituted by `hsb' on input line 1367.
-Package xcolor Info: Model `tHsb' substituted by `hsb' on input line 1368.
-Package xcolor Info: Model `HSB' substituted by `hsb' on input line 1369.
-Package xcolor Info: Model `Gray' substituted by `gray' on input line 1370.
-Package xcolor Info: Model `wave' substituted by `hsb' on input line 1371.
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/geometry/geometry.sty
-Package: geometry 2018/03/24 v5.7 Page Geometry
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/ifpdf.sty
-Package: ifpdf 2017/03/15 v3.2 Provides the ifpdf switch
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/ifvtex.sty
-Package: ifvtex 2016/05/16 v1.6 Detect VTeX and its facilities (HO)
-Package ifvtex Info: VTeX not detected.
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/ifxetex/ifxetex.sty
-Package: ifxetex 2010/09/12 v0.6 Provides ifxetex conditional
-)
-\Gm@cnth=\count274
-\Gm@cntv=\count275
-\c@Gm@tempcnt=\count276
-\Gm@bindingoffset=\dimen173
-\Gm@wd@mp=\dimen174
-\Gm@odd@mp=\dimen175
-\Gm@even@mp=\dimen176
-\Gm@layoutwidth=\dimen177
-\Gm@layoutheight=\dimen178
-\Gm@layouthoffset=\dimen179
-\Gm@layoutvoffset=\dimen180
-\Gm@dimlist=\toks18
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/koma-script/scrlayer-scrpage.sty
-Package: scrlayer-scrpage 2018/03/30 v3.25 KOMA-Script package (end user interf
-ace for scrlayer)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/koma-script/scrlayer.sty
-Package: scrlayer 2018/03/30 v3.25 KOMA-Script package (defining layers and pag
-e styles)
-\footheight=\skip59
-Package scrlayer Info: patching LaTeX kernel macro \pagestyle on input line 199
-7.
-)
-Package scrbase Info: Unknown processing state.
-(scrbase) Processing option `markcase=used'
-(scrbase) of member `.scrlayer-scrpage.sty' of family
-(scrbase) `KOMA' doesn't set
-(scrbase) a valid state. This will be interpreted
-(scrbase) as \FamilyKeyStateProcessed on input line 724.
-)
-Package scrlayer-scrpage Info: auto-selection of `pagestyleset=standard'.
-
-1: chapter
-1: chapter
-1: section
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \blankpagestyle with sig. ' m ' on line 308.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \setblankpagestyle with sig. ' m ' on line 309.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \setchapterpagestyle with sig. ' m ' on line 310.
-.................................................
-.................................................
-. LaTeX info: "xparse/redefine-command"
-.
-. Redefining command \cleardoublepage with sig. '' on line 317.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-environment"
-.
-. Defining environment 'abbreviations' with sig. ' m ' on line 334.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \abstractauthorfont with sig. '' on line 340.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-command"
-.
-. Defining command \abstracttitlefont with sig. '' on line 341.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-environment"
-.
-. Defining environment 'abstract' with sig. ' O{\null \vfill } ' on line 380.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-environment"
-.
-. Defining environment 'extraAbstract' with sig. ' O{\null \vfill } ' on line
-. 405.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-environment"
-.
-. Defining environment 'acknowledgements' with sig. '' on line 433.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-environment"
-.
-. Defining environment 'declaration' with sig. '' on line 455.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-environment"
-.
-. Defining environment 'constants' with sig. ' m ' on line 497.
-.................................................
-.................................................
-. LaTeX info: "xparse/define-environment"
-.
-. Defining environment 'symbols' with sig. ' m ' on line 515.
-.................................................
-) (/usr/local/texlive/2018/texmf-dist/tex/latex/base/inputenc.sty
-Package: inputenc 2018/04/06 v1.3b Input encoding file
-\inpenc@prehook=\toks19
-\inpenc@posthook=\toks20
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/fontenc.sty
-Package: fontenc 2017/04/05 v2.0i Standard LaTeX package
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/t1enc.def
-File: t1enc.def 2017/04/05 v2.0i Standard LaTeX file
-LaTeX Font Info: Redeclaring font encoding T1 on input line 48.
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/psnfss/mathpazo.sty
-Package: mathpazo 2005/04/12 PSNFSS-v9.2a Palatino w/ Pazo Math (D.Puga, WaS)
-\symupright=\mathgroup4
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/hyperref/hyperref.sty
-Package: hyperref 2018/02/06 v6.86b Hypertext links for LaTeX
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/hobsub-hyperref.sty
-Package: hobsub-hyperref 2016/05/16 v1.14 Bundle oberdiek, subset hyperref (HO)
-
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/hobsub-generic.sty
-Package: hobsub-generic 2016/05/16 v1.14 Bundle oberdiek, subset generic (HO)
-Package: hobsub 2016/05/16 v1.14 Construct package bundles (HO)
-Package: infwarerr 2016/05/16 v1.4 Providing info/warning/error messages (HO)
-Package: ltxcmds 2016/05/16 v1.23 LaTeX kernel commands for general use (HO)
-Package: ifluatex 2016/05/16 v1.4 Provides the ifluatex switch (HO)
-Package ifluatex Info: LuaTeX not detected.
-Package hobsub Info: Skipping package `ifvtex' (already loaded).
-Package: intcalc 2016/05/16 v1.2 Expandable calculations with integers (HO)
-Package hobsub Info: Skipping package `ifpdf' (already loaded).
-Package: etexcmds 2016/05/16 v1.6 Avoid name clashes with e-TeX commands (HO)
-Package etexcmds Info: Could not find \expanded.
-(etexcmds) That can mean that you are not using pdfTeX 1.50 or
-(etexcmds) that some package has redefined \expanded.
-(etexcmds) In the latter case, load this package earlier.
-Package: kvsetkeys 2016/05/16 v1.17 Key value parser (HO)
-Package: kvdefinekeys 2016/05/16 v1.4 Define keys (HO)
-Package: pdftexcmds 2018/01/30 v0.27 Utility functions of pdfTeX for LuaTeX (HO
-)
-Package pdftexcmds Info: LuaTeX not detected.
-Package pdftexcmds Info: \pdf@primitive is available.
-Package pdftexcmds Info: \pdf@ifprimitive is available.
-Package pdftexcmds Info: \pdfdraftmode found.
-Package: pdfescape 2016/05/16 v1.14 Implements pdfTeX's escape features (HO)
-Package: bigintcalc 2016/05/16 v1.4 Expandable calculations on big integers (HO
-)
-Package: bitset 2016/05/16 v1.2 Handle bit-vector datatype (HO)
-Package: uniquecounter 2016/05/16 v1.3 Provide unlimited unique counter (HO)
-)
-Package hobsub Info: Skipping package `hobsub' (already loaded).
-Package: letltxmacro 2016/05/16 v1.5 Let assignment for LaTeX macros (HO)
-Package: hopatch 2016/05/16 v1.3 Wrapper for package hooks (HO)
-Package: xcolor-patch 2016/05/16 xcolor patch
-Package: atveryend 2016/05/16 v1.9 Hooks at the very end of document (HO)
-Package: atbegshi 2016/06/09 v1.18 At begin shipout hook (HO)
-Package: refcount 2016/05/16 v3.5 Data extraction from label references (HO)
-Package: hycolor 2016/05/16 v1.8 Color options for hyperref/bookmark (HO)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/oberdiek/auxhook.sty
-Package: auxhook 2016/05/16 v1.4 Hooks for auxiliary files (HO)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/oberdiek/kvoptions.sty
-Package: kvoptions 2016/05/16 v3.12 Key value format for package options (HO)
-)
-\@linkdim=\dimen181
-\Hy@linkcounter=\count277
-\Hy@pagecounter=\count278
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/hyperref/pd1enc.def
-File: pd1enc.def 2018/02/06 v6.86b Hyperref: PDFDocEncoding definition (HO)
-Now handling font encoding PD1 ...
-... no UTF-8 mapping file for font encoding PD1
-)
-\Hy@SavedSpaceFactor=\count279
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/latexconfig/hyperref.cfg
-File: hyperref.cfg 2002/06/06 v1.2 hyperref configuration of TeXLive
-)
-Package hyperref Info: Hyper figures OFF on input line 4509.
-Package hyperref Info: Link nesting OFF on input line 4514.
-Package hyperref Info: Hyper index ON on input line 4517.
-Package hyperref Info: Plain pages OFF on input line 4524.
-Package hyperref Info: Backreferencing OFF on input line 4529.
-Package hyperref Info: Implicit mode ON; LaTeX internals redefined.
-Package hyperref Info: Bookmarks ON on input line 4762.
-\c@Hy@tempcnt=\count280
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/url/url.sty
-\Urlmuskip=\muskip16
-Package: url 2013/09/16 ver 3.4 Verb mode for urls, etc.
-)
-LaTeX Info: Redefining \url on input line 5115.
-\XeTeXLinkMargin=\dimen182
-\Fld@menulength=\count281
-\Field@Width=\dimen183
-\Fld@charsize=\dimen184
-Package hyperref Info: Hyper figures OFF on input line 6369.
-Package hyperref Info: Link nesting OFF on input line 6374.
-Package hyperref Info: Hyper index ON on input line 6377.
-Package hyperref Info: backreferencing OFF on input line 6384.
-Package hyperref Info: Link coloring OFF on input line 6389.
-Package hyperref Info: Link coloring with OCG OFF on input line 6394.
-Package hyperref Info: PDF/A mode OFF on input line 6399.
-LaTeX Info: Redefining \ref on input line 6439.
-LaTeX Info: Redefining \pageref on input line 6443.
-\Hy@abspage=\count282
-\c@Item=\count283
-\c@Hfootnote=\count284
-)
-Package scrhack Info: hyperref hack deactivated because of
-(scrhack) detection of hyperref version, that doesn't
-(scrhack) need that hack, on input line 46.
-Package hyperref Info: Driver (autodetected): hpdftex.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/hyperref/hpdftex.def
-File: hpdftex.def 2018/02/06 v6.86b Hyperref driver for pdfTeX
-\Fld@listcount=\count285
-\c@bookmark@seq@number=\count286
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/oberdiek/rerunfilecheck.sty
-Package: rerunfilecheck 2016/05/16 v1.8 Rerun checks for auxiliary files (HO)
-Package uniquecounter Info: New unique counter `rerunfilecheck' on input line 2
-82.
-)
-\Hy@SectionHShift=\skip60
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/biblatex.sty
-Package: biblatex 2018/03/04 v3.11 programmable bibliographies (PK/MW)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/logreq/logreq.sty
-Package: logreq 2010/08/04 v1.0 xml request logger
-\lrq@indent=\count287
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/logreq/logreq.def
-File: logreq.def 2010/08/04 v1.0 logreq spec v1.0
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/ifthen.sty
-Package: ifthen 2014/09/29 v1.1c Standard LaTeX ifthen package (DPC)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/xstring/xstring.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/xstring/xstring.tex
-\@xs@message=\write3
-\integerpart=\count288
-\decimalpart=\count289
-)
-Package: xstring 2013/10/13 v1.7c String manipulations (C Tellechea)
-)
-\c@tabx@nest=\count290
-\c@listtotal=\count291
-\c@listcount=\count292
-\c@liststart=\count293
-\c@liststop=\count294
-\c@citecount=\count295
-\c@citetotal=\count296
-\c@multicitecount=\count297
-\c@multicitetotal=\count298
-\c@instcount=\count299
-\c@maxnames=\count300
-\c@minnames=\count301
-\c@maxitems=\count302
-\c@minitems=\count303
-\c@citecounter=\count304
-\c@savedcitecounter=\count305
-\c@uniquelist=\count306
-\c@uniquename=\count307
-\c@refsection=\count308
-\c@refsegment=\count309
-\c@maxextratitle=\count310
-\c@maxextratitleyear=\count311
-\c@maxextradate=\count312
-\c@maxextraalpha=\count313
-\c@abbrvpenalty=\count314
-\c@highnamepenalty=\count315
-\c@lownamepenalty=\count316
-\c@maxparens=\count317
-\c@parenlevel=\count318
-\blx@tempcnta=\count319
-\blx@tempcntb=\count320
-\blx@tempcntc=\count321
-\blx@maxsection=\count322
-\blx@maxsegment@0=\count323
-\blx@notetype=\count324
-\blx@parenlevel@text=\count325
-\blx@parenlevel@foot=\count326
-\blx@sectionciteorder@0=\count327
-\labelnumberwidth=\skip61
-\labelalphawidth=\skip62
-\biblabelsep=\skip63
-\bibitemsep=\skip64
-\bibnamesep=\skip65
-\bibinitsep=\skip66
-\bibparsep=\skip67
-\bibhang=\skip68
-\blx@bcfin=\read2
-\blx@bcfout=\write4
-\c@mincomprange=\count328
-\c@maxcomprange=\count329
-\c@mincompwidth=\count330
-Package biblatex Info: Trying to load biblatex default data model...
-Package biblatex Info: ... file 'blx-dm.def' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/blx-dm.def
-File: blx-dm.def 2018/03/04 v3.11 biblatex localization (PK/MW)
-)
-Package biblatex Info: Trying to load biblatex style data model...
-Package biblatex Info: ... file 'authoryear.dbx' not found.
-Package biblatex Info: Trying to load biblatex custom data model...
-Package biblatex Info: ... file 'biblatex-dm.cfg' not found.
-\c@afterword=\count331
-\c@savedafterword=\count332
-\c@annotator=\count333
-\c@savedannotator=\count334
-\c@author=\count335
-\c@savedauthor=\count336
-\c@bookauthor=\count337
-\c@savedbookauthor=\count338
-\c@commentator=\count339
-\c@savedcommentator=\count340
-\c@editor=\count341
-\c@savededitor=\count342
-\c@editora=\count343
-\c@savededitora=\count344
-\c@editorb=\count345
-\c@savededitorb=\count346
-\c@editorc=\count347
-\c@savededitorc=\count348
-\c@foreword=\count349
-\c@savedforeword=\count350
-\c@holder=\count351
-\c@savedholder=\count352
-\c@introduction=\count353
-\c@savedintroduction=\count354
-\c@namea=\count355
-\c@savednamea=\count356
-\c@nameb=\count357
-\c@savednameb=\count358
-\c@namec=\count359
-\c@savednamec=\count360
-\c@translator=\count361
-\c@savedtranslator=\count362
-\c@shortauthor=\count363
-\c@savedshortauthor=\count364
-\c@shorteditor=\count365
-\c@savedshorteditor=\count366
-\c@labelname=\count367
-\c@savedlabelname=\count368
-\c@institution=\count369
-\c@savedinstitution=\count370
-\c@lista=\count371
-\c@savedlista=\count372
-\c@listb=\count373
-\c@savedlistb=\count374
-\c@listc=\count375
-\c@savedlistc=\count376
-\c@listd=\count377
-\c@savedlistd=\count378
-\c@liste=\count379
-\c@savedliste=\count380
-\c@listf=\count381
-\c@savedlistf=\count382
-\c@location=\count383
-\c@savedlocation=\count384
-\c@organization=\count385
-\c@savedorganization=\count386
-\c@origlocation=\count387
-\c@savedoriglocation=\count388
-\c@origpublisher=\count389
-\c@savedorigpublisher=\count390
-\c@publisher=\count391
-\c@savedpublisher=\count392
-\c@language=\count393
-\c@savedlanguage=\count394
-\c@origlanguage=\count395
-\c@savedoriglanguage=\count396
-\c@pageref=\count397
-\c@savedpageref=\count398
-\shorthandwidth=\skip69
-\shortjournalwidth=\skip70
-\shortserieswidth=\skip71
-\shorttitlewidth=\skip72
-\shortauthorwidth=\skip73
-\shorteditorwidth=\skip74
-\locallabelnumberwidth=\skip75
-\locallabelalphawidth=\skip76
-\localshorthandwidth=\skip77
-\localshortjournalwidth=\skip78
-\localshortserieswidth=\skip79
-\localshorttitlewidth=\skip80
-\localshortauthorwidth=\skip81
-\localshorteditorwidth=\skip82
-Package biblatex Info: Trying to load compatibility code...
-Package biblatex Info: ... file 'blx-compat.def' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/blx-compat.def
-File: blx-compat.def 2018/03/04 v3.11 biblatex compatibility (PK/MW)
-)
-Package biblatex Info: Trying to load BibTeX backend compatibility...
-Package biblatex Info: ... file 'blx-bibtex.def' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/blx-bibtex.def
-File: blx-bibtex.def 2018/03/04 v3.11 biblatex compatibility (PK/MW)
-
-
-Package biblatex Warning: Using fall-back BibTeX(8) backend:
-(biblatex) functionality may be reduced/unavailable.
-
-)
-Package biblatex Info: Trying to load generic definitions...
-Package biblatex Info: ... file 'biblatex.def' found.
- (/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/biblatex.def
-File: biblatex.def 2018/03/04 v3.11 biblatex compatibility (PK/MW)
-\c@textcitecount=\count399
-\c@textcitetotal=\count400
-\c@textcitemaxnames=\count401
-\c@biburlnumpenalty=\count402
-\c@biburlucpenalty=\count403
-\c@biburllcpenalty=\count404
-\c@smartand=\count405
-)
-Package biblatex Info: Trying to load natbib compatibility...
-Package biblatex Info: ... file 'blx-natbib.def' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/blx-natbib.def
-File: blx-natbib.def 2018/03/04 v3.11 biblatex compatibility (PK/MW)
-)
-Package biblatex Info: Trying to load bibliography style 'authoryear'...
-Package biblatex Info: ... file 'authoryear.bbx' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/bbx/authoryear.bbx
-File: authoryear.bbx 2018/03/04 v3.11 biblatex bibliography style (PK/MW)
-Package biblatex Info: Trying to load bibliography style 'standard'...
-Package biblatex Info: ... file 'standard.bbx' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/bbx/standard.bbx
-File: standard.bbx 2018/03/04 v3.11 biblatex bibliography style (PK/MW)
-\c@bbx:relatedcount=\count406
-\c@bbx:relatedtotal=\count407
-))
-Package biblatex Info: Trying to load citation style 'authoryear'...
-Package biblatex Info: ... file 'authoryear.cbx' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/cbx/authoryear.cbx
-File: authoryear.cbx 2018/03/04 v3.11 biblatex citation style (PK/MW)
-Package biblatex Info: Redefining '\cite'.
-Package biblatex Info: Redefining '\parencite'.
-Package biblatex Info: Redefining '\footcite'.
-Package biblatex Info: Redefining '\footcitetext'.
-Package biblatex Info: Redefining '\smartcite'.
-Package biblatex Info: Redefining '\textcite'.
-Package biblatex Info: Redefining '\textcites'.
-)
-Package biblatex Info: Trying to load configuration file...
-Package biblatex Info: ... file 'biblatex.cfg' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/biblatex.cfg
-File: biblatex.cfg
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/csquotes/csquotes.sty
-Package: csquotes 2018/02/11 v5.2c context-sensitive quotations (JAW)
-\csq@reset=\count408
-\csq@gtype=\count409
-\csq@glevel=\count410
-\csq@qlevel=\count411
-\csq@maxlvl=\count412
-\csq@tshold=\count413
-\csq@ltx@everypar=\toks21
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/csquotes/csquotes.def
-File: csquotes.def 2018/02/11 v5.2c csquotes generic definitions (JAW)
-)
-Package csquotes Info: Trying to load configuration file 'csquotes.cfg'...
-Package csquotes Info: ... configuration file loaded successfully.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/csquotes/csquotes.cfg
-File: csquotes.cfg
-)
-Package csquotes Info: Enabling multilingual quotes.
-)
-(./graphic.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/frontendlayer/tikz.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/basiclayer/pgf.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/utilities/pgfrcs.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfutil-common.te
-x
-\pgfutil@everybye=\toks22
-\pgfutil@tempdima=\dimen185
-\pgfutil@tempdimb=\dimen186
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfutil-common-li
-sts.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfutil-latex.def
-\pgfutil@abb=\box54
-(/usr/local/texlive/2018/texmf-dist/tex/latex/ms/everyshi.sty
-Package: everyshi 2001/05/15 v3.00 EveryShipout Package (MS)
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfrcs.code.tex
-Package: pgfrcs 2015/08/07 v3.0.1a (rcs-revision 1.31)
-))
-Package: pgf 2015/08/07 v3.0.1a (rcs-revision 1.15)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/basiclayer/pgfcore.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/systemlayer/pgfsys.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsys.code.tex
-Package: pgfsys 2014/07/09 v3.0.1a (rcs-revision 1.48)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex
-\pgfkeys@pathtoks=\toks23
-\pgfkeys@temptoks=\toks24
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfkeysfiltered.c
-ode.tex
-\pgfkeys@tmptoks=\toks25
-))
-\pgf@x=\dimen187
-\pgf@y=\dimen188
-\pgf@xa=\dimen189
-\pgf@ya=\dimen190
-\pgf@xb=\dimen191
-\pgf@yb=\dimen192
-\pgf@xc=\dimen193
-\pgf@yc=\dimen194
-\w@pgf@writea=\write5
-\r@pgf@reada=\read3
-\c@pgf@counta=\count414
-\c@pgf@countb=\count415
-\c@pgf@countc=\count416
-\c@pgf@countd=\count417
-\t@pgf@toka=\toks26
-\t@pgf@tokb=\toks27
-\t@pgf@tokc=\toks28
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgf.cfg
-File: pgf.cfg 2008/05/14 (rcs-revision 1.7)
-)
-Driver file for pgf: pgfsys-pdftex.def
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-pdftex.d
-ef
-File: pgfsys-pdftex.def 2014/10/11 (rcs-revision 1.35)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-common-p
-df.def
-File: pgfsys-common-pdf.def 2013/10/10 (rcs-revision 1.13)
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsyssoftpath.
-code.tex
-File: pgfsyssoftpath.code.tex 2013/09/09 (rcs-revision 1.9)
-\pgfsyssoftpath@smallbuffer@items=\count418
-\pgfsyssoftpath@bigbuffer@items=\count419
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsysprotocol.
-code.tex
-File: pgfsysprotocol.code.tex 2006/10/16 (rcs-revision 1.4)
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcore.code.tex
-Package: pgfcore 2010/04/11 v3.0.1a (rcs-revision 1.7)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathcalc.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathutil.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathparser.code.tex
-\pgfmath@dimen=\dimen195
-\pgfmath@count=\count420
-\pgfmath@box=\box55
-\pgfmath@toks=\toks29
-\pgfmath@stack@operand=\toks30
-\pgfmath@stack@operation=\toks31
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.code.
-tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.basic
-.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.trigo
-nometric.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.rando
-m.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.compa
-rison.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.base.
-code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.round
-.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.misc.
-code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.integ
-erarithmetics.code.tex)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfloat.code.tex
-\c@pgfmathroundto@lastzeros=\count421
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepoints.co
-de.tex
-File: pgfcorepoints.code.tex 2013/10/07 (rcs-revision 1.27)
-\pgf@picminx=\dimen196
-\pgf@picmaxx=\dimen197
-\pgf@picminy=\dimen198
-\pgf@picmaxy=\dimen199
-\pgf@pathminx=\dimen256
-\pgf@pathmaxx=\dimen257
-\pgf@pathminy=\dimen258
-\pgf@pathmaxy=\dimen259
-\pgf@xx=\dimen260
-\pgf@xy=\dimen261
-\pgf@yx=\dimen262
-\pgf@yy=\dimen263
-\pgf@zx=\dimen264
-\pgf@zy=\dimen265
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathconst
-ruct.code.tex
-File: pgfcorepathconstruct.code.tex 2013/10/07 (rcs-revision 1.29)
-\pgf@path@lastx=\dimen266
-\pgf@path@lasty=\dimen267
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathusage
-.code.tex
-File: pgfcorepathusage.code.tex 2014/11/02 (rcs-revision 1.24)
-\pgf@shorten@end@additional=\dimen268
-\pgf@shorten@start@additional=\dimen269
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorescopes.co
-de.tex
-File: pgfcorescopes.code.tex 2015/05/08 (rcs-revision 1.46)
-\pgfpic=\box56
-\pgf@hbox=\box57
-\pgf@layerbox@main=\box58
-\pgf@picture@serial@count=\count422
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoregraphicst
-ate.code.tex
-File: pgfcoregraphicstate.code.tex 2014/11/02 (rcs-revision 1.12)
-\pgflinewidth=\dimen270
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransform
-ations.code.tex
-File: pgfcoretransformations.code.tex 2015/08/07 (rcs-revision 1.20)
-\pgf@pt@x=\dimen271
-\pgf@pt@y=\dimen272
-\pgf@pt@temp=\dimen273
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorequick.cod
-e.tex
-File: pgfcorequick.code.tex 2008/10/09 (rcs-revision 1.3)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreobjects.c
-ode.tex
-File: pgfcoreobjects.code.tex 2006/10/11 (rcs-revision 1.2)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathproce
-ssing.code.tex
-File: pgfcorepathprocessing.code.tex 2013/09/09 (rcs-revision 1.9)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorearrows.co
-de.tex
-File: pgfcorearrows.code.tex 2015/05/14 (rcs-revision 1.43)
-\pgfarrowsep=\dimen274
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreshade.cod
-e.tex
-File: pgfcoreshade.code.tex 2013/07/15 (rcs-revision 1.15)
-\pgf@max=\dimen275
-\pgf@sys@shading@range@num=\count423
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreimage.cod
-e.tex
-File: pgfcoreimage.code.tex 2013/07/15 (rcs-revision 1.18)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreexternal.
-code.tex
-File: pgfcoreexternal.code.tex 2014/07/09 (rcs-revision 1.21)
-\pgfexternal@startupbox=\box59
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorelayers.co
-de.tex
-File: pgfcorelayers.code.tex 2013/07/18 (rcs-revision 1.7)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretranspare
-ncy.code.tex
-File: pgfcoretransparency.code.tex 2013/09/30 (rcs-revision 1.5)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepatterns.
-code.tex
-File: pgfcorepatterns.code.tex 2013/11/07 (rcs-revision 1.5)
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/modules/pgfmoduleshapes.cod
-e.tex
-File: pgfmoduleshapes.code.tex 2014/03/21 (rcs-revision 1.35)
-\pgfnodeparttextbox=\box60
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/modules/pgfmoduleplot.code.
-tex
-File: pgfmoduleplot.code.tex 2015/08/03 (rcs-revision 1.13)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version
--0-65.sty
-Package: pgfcomp-version-0-65 2007/07/03 v3.0.1a (rcs-revision 1.7)
-\pgf@nodesepstart=\dimen276
-\pgf@nodesepend=\dimen277
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version
--1-18.sty
-Package: pgfcomp-version-1-18 2007/07/23 v3.0.1a (rcs-revision 1.1)
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/utilities/pgffor.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/utilities/pgfkeys.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex)
-) (/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/math/pgfmath.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgffor.code.tex
-Package: pgffor 2013/12/13 v3.0.1a (rcs-revision 1.25)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex)
-\pgffor@iter=\dimen278
-\pgffor@skip=\dimen279
-\pgffor@stack=\toks32
-\pgffor@toks=\toks33
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/tikz.cod
-e.tex
-Package: tikz 2015/08/07 v3.0.1a (rcs-revision 1.151)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/pgflibraryplothan
-dlers.code.tex
-File: pgflibraryplothandlers.code.tex 2013/08/31 v3.0.1a (rcs-revision 1.20)
-\pgf@plot@mark@count=\count424
-\pgfplotmarksize=\dimen280
-)
-\tikz@lastx=\dimen281
-\tikz@lasty=\dimen282
-\tikz@lastxsaved=\dimen283
-\tikz@lastysaved=\dimen284
-\tikzleveldistance=\dimen285
-\tikzsiblingdistance=\dimen286
-\tikz@figbox=\box61
-\tikz@figbox@bg=\box62
-\tikz@tempbox=\box63
-\tikz@tempbox@bg=\box64
-\tikztreelevel=\count425
-\tikznumberofchildren=\count426
-\tikznumberofcurrentchild=\count427
-\tikz@fig@count=\count428
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/modules/pgfmodulematrix.cod
-e.tex
-File: pgfmodulematrix.code.tex 2013/09/17 (rcs-revision 1.8)
-\pgfmatrixcurrentrow=\count429
-\pgfmatrixcurrentcolumn=\count430
-\pgf@matrix@numberofcolumns=\count431
-)
-\tikz@expandcount=\count432
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibrarytopaths.code.tex
-File: tikzlibrarytopaths.code.tex 2008/06/17 v3.0.1a (rcs-revision 1.2)
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgfplots/pgfplots.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplots.revision.tex)
-Package: pgfplots 2018/03/28 v1.16 Data Visualization (1.16)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplots.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplotscore.code.tex
-\t@pgfplots@toka=\toks34
-\t@pgfplots@tokb=\toks35
-\t@pgfplots@tokc=\toks36
-\pgfplots@tmpa=\dimen287
-\c@pgfplots@coordindex=\count433
-\c@pgfplots@scanlineindex=\count434
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/sys/pgfplotssysgeneric
-.code.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/libs/pgfplotslibrary.c
-ode.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/oldpgfcompatib/pgfplot
-soldpgfsupp_loader.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/pgflibraryfpu.cod
-e.tex)
-Package pgfplots: loading complementary arithmetics for your pgf version...
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/oldpgfcompatib/pgfplot
-soldpgfsupp_pgflibraryfpu.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/oldpgfcompatib/pgfplot
-soldpgfsupp_pgfmathfloat.code.tex
-\c@pgfmathroundto@lastzeros=\count435
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/oldpgfcompatib/pgfplot
-soldpgfsupp_leq.code.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/util/pgfplotsutil.code
-.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/liststructure/pgfplots
-liststructure.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/liststructure/pgfplots
-liststructureext.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/liststructure/pgfplots
-array.code.tex
-\c@pgfplotsarray@tmp=\count436
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/liststructure/pgfplots
-matrix.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/numtable/pgfplotstable
-shared.code.tex
-\c@pgfplotstable@counta=\count437
-\t@pgfplotstable@a=\toks37
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/liststructure/pgfplots
-deque.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/util/pgfplotsbinary.co
-de.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/util/pgfplotsbinary.da
-ta.code.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/util/pgfplotsutil.verb
-.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/libs/pgflibrarypgfplot
-s.surfshading.code.tex
-\c@pgfplotslibrarysurf@no=\count438
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/sys/pgflibrarypgfplots
-.surfshading.pgfsys-pdftex.def)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/util/pgfplotscolormap.
-code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/util/pgfplotscolor.cod
-e.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplotsstackedplots.c
-ode.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplotsplothandlers.c
-ode.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplotsmeshplothandle
-r.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplotsmeshplotimage.
-code.tex)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplots.scaling.code.
-tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplotscoordprocessin
-g.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplots.errorbars.cod
-e.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplots.markers.code.
-tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplotsticks.code.tex
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgfplots/pgfplots.paths.code.te
-x)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibrarydecorations.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/modules/pgfmoduledecoration
-s.code.tex
-\pgfdecoratedcompleteddistance=\dimen288
-\pgfdecoratedremainingdistance=\dimen289
-\pgfdecoratedinputsegmentcompleteddistance=\dimen290
-\pgfdecoratedinputsegmentremainingdistance=\dimen291
-\pgf@decorate@distancetomove=\dimen292
-\pgf@decorate@repeatstate=\count439
-\pgfdecorationsegmentamplitude=\dimen293
-\pgfdecorationsegmentlength=\dimen294
-)
-\tikz@lib@dec@box=\box65
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibrarydecorations.pathmorphing.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/decorations/pgfli
-brarydecorations.pathmorphing.code.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibrarydecorations.pathreplacing.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/decorations/pgfli
-brarydecorations.pathreplacing.code.tex))
-\pgfplots@numplots=\count440
-\pgfplots@xmin@reg=\dimen295
-\pgfplots@xmax@reg=\dimen296
-\pgfplots@ymin@reg=\dimen297
-\pgfplots@ymax@reg=\dimen298
-\pgfplots@zmin@reg=\dimen299
-\pgfplots@zmax@reg=\dimen300
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibraryplotmarks.code.tex
-File: tikzlibraryplotmarks.code.tex 2008/01/09 v3.0.1a (rcs-revision 1.1)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/pgflibraryplotmar
-ks.code.tex
-File: pgflibraryplotmarks.code.tex 2015/08/03 v3.0.1a (rcs-revision 1.14)
-)))) (./data.sty
-
-LaTeX Warning: File `re-python2.data' already exists on the system.
- Not generating it from this source.
-
-
-LaTeX Warning: File `re-js.data' already exists on the system.
- Not generating it from this source.
-
-
-LaTeX Warning: File `re-java.data' already exists on the system.
- Not generating it from this source.
-
-
-LaTeX Warning: File `good-java.data' already exists on the system.
- Not generating it from this source.
-
-
-LaTeX Warning: File `bad-scala.data' already exists on the system.
- Not generating it from this source.
-
-) (/usr/local/texlive/2018/texmf-dist/tex/latex/amsmath/amsmath.sty
-Package: amsmath 2017/09/02 v2.17a AMS math features
-\@mathmargin=\skip83
-
-For additional information on amsmath, use the `?' option.
-(/usr/local/texlive/2018/texmf-dist/tex/latex/amsmath/amsbsy.sty
-Package: amsbsy 1999/11/29 v1.2d Bold Symbols
-\pmbraise@=\dimen301
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/amsmath/amsopn.sty
-Package: amsopn 2016/03/08 v2.02 operator names
-)
-\inf@bad=\count441
-LaTeX Info: Redefining \frac on input line 213.
-\uproot@=\count442
-\leftroot@=\count443
-LaTeX Info: Redefining \overline on input line 375.
-\classnum@=\count444
-\DOTSCASE@=\count445
-LaTeX Info: Redefining \ldots on input line 472.
-LaTeX Info: Redefining \dots on input line 475.
-LaTeX Info: Redefining \cdots on input line 596.
-\Mathstrutbox@=\box66
-\strutbox@=\box67
-\big@size=\dimen302
-LaTeX Font Info: Redeclaring font encoding OML on input line 712.
-LaTeX Font Info: Redeclaring font encoding OMS on input line 713.
-\macc@depth=\count446
-\c@MaxMatrixCols=\count447
-\dotsspace@=\muskip17
-\c@parentequation=\count448
-\dspbrk@lvl=\count449
-\tag@help=\toks38
-\row@=\count450
-\column@=\count451
-\maxfields@=\count452
-\andhelp@=\toks39
-\eqnshift@=\dimen303
-\alignsep@=\dimen304
-\tagshift@=\dimen305
-\tagwidth@=\dimen306
-\totwidth@=\dimen307
-\lineht@=\dimen308
-\@envbody=\toks40
-\multlinegap=\skip84
-\multlinetaggap=\skip85
-\mathdisplay@stack=\toks41
-LaTeX Info: Redefining \[ on input line 2817.
-LaTeX Info: Redefining \] on input line 2818.
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/algorithmicx/algpseudocode.sty
-Package: algpseudocode
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/algorithmicx/algorithmicx.sty
-Package: algorithmicx 2005/04/27 v1.2 Algorithmicx
-
-Document Style algorithmicx 1.2 - a greatly improved `algorithmic' style
-\c@ALG@line=\count453
-\c@ALG@rem=\count454
-\c@ALG@nested=\count455
-\ALG@tlm=\skip86
-\ALG@thistlm=\skip87
-\c@ALG@Lnr=\count456
-\c@ALG@blocknr=\count457
-\c@ALG@storecount=\count458
-\c@ALG@tmpcounter=\count459
-\ALG@tmplength=\skip88
-)
-Document Style - pseudocode environments for use with the `algorithmicx' style
-) (/usr/local/texlive/2018/texmf-dist/tex/latex/enumitem/enumitem.sty
-Package: enumitem 2011/09/28 v3.5.2 Customized lists
-\labelindent=\skip89
-\enit@outerparindent=\dimen309
-\enit@toks=\toks42
-\enit@inbox=\box68
-\enitdp@description=\count460
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/ncctools/nccmath.sty
-Package: nccmath 2005/02/21 v1.2 Additional Math Commands (NCC)
-\NCC@fracrulewidth=\dimen310
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/tikz-cd/tikz-cd.sty
-Package: tikz-cd 2014/10/30 v0.9e Commutative diagrams with tikz
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/tikz-cd/tikzlibrarycd.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibrarymatrix.code.tex
-File: tikzlibrarymatrix.code.tex 2013/07/12 v3.0.1a (rcs-revision 1.4)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibraryquotes.code.tex
-File: tikzlibraryquotes.code.tex 2014/03/21 v3.0.1a (rcs-revision 1.4)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/pgflibraryarrows.
-meta.code.tex
-File: pgflibraryarrows.meta.code.tex 2015/05/13 v3.0.1a (rcs-revision 1.13)
-\pgfarrowinset=\dimen311
-\pgfarrowlength=\dimen312
-\pgfarrowwidth=\dimen313
-\pgfarrowlinewidth=\dimen314
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibraryautomata.code.tex
-File: tikzlibraryautomata.code.tex 2008/07/14 v3.0.1a (rcs-revision 1.3)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibraryshapes.multipart.code.tex
-File: tikzlibraryshapes.multipart.code.tex 2008/01/09 v3.0.1a (rcs-revision 1.1
-)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibrary
-shapes.multipart.code.tex
-File: pgflibraryshapes.multipart.code.tex 2010/01/07 v3.0.1a (rcs-revision 1.2)
-
-\pgfnodepartlowerbox=\box69
-\pgfnodeparttwobox=\box70
-\pgfnodepartthreebox=\box71
-\pgfnodepartfourbox=\box72
-\pgfnodeparttwentybox=\box73
-\pgfnodepartnineteenbox=\box74
-\pgfnodeparteighteenbox=\box75
-\pgfnodepartseventeenbox=\box76
-\pgfnodepartsixteenbox=\box77
-\pgfnodepartfifteenbox=\box78
-\pgfnodepartfourteenbox=\box79
-\pgfnodepartthirteenbox=\box80
-\pgfnodeparttwelvebox=\box81
-\pgfnodepartelevenbox=\box82
-\pgfnodeparttenbox=\box83
-\pgfnodepartninebox=\box84
-\pgfnodeparteightbox=\box85
-\pgfnodepartsevenbox=\box86
-\pgfnodepartsixbox=\box87
-\pgfnodepartfivebox=\box88
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibrarypositioning.code.tex
-File: tikzlibrarypositioning.code.tex 2008/10/06 v3.0.1a (rcs-revision 1.7)
-)
-Package hyperref Info: Option `bookmarksopen' set `true' on input line 103.
-Package hyperref Info: Option `hypertexnames' set `false' on input line 103.
-Package hyperref Info: Option `colorlinks' set `true' on input line 103.
-Package hyperref Info: Option `unicode' set `true' on input line 103.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/hyperref/puenc.def
-File: puenc.def 2018/02/06 v6.86b Hyperref: PDF Unicode definition (HO)
-Now handling font encoding PU ...
-... no UTF-8 mapping file for font encoding PU
-)
-Package hyperref Info: Option `breaklinks' set `true' on input line 103.
-Package biblatex Info: Trying to load language 'english'...
-Package biblatex Info: ... file 'english.lbx' found.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/biblatex/lbx/english.lbx
-File: english.lbx 2018/03/04 v3.11 biblatex localization (PK/MW)
-)
-Package csquotes Info: Checking for multilingual support...
-Package csquotes Info: ... found 'babel' package.
-
-(./main.aux (./Chapters/Chapter1.aux) (./Chapters/Chapter2.aux)
-(./Chapters/Chapter3.aux
-
-LaTeX Warning: Label `ChapterX' multiply defined.
-
-) (./Appendices/AppendixA.aux))
-\openout1 = `main.aux'.
-
-LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 103.
-LaTeX Font Info: ... okay on input line 103.
-LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 103.
-LaTeX Font Info: ... okay on input line 103.
-LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 103.
-LaTeX Font Info: ... okay on input line 103.
-LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 103.
-LaTeX Font Info: ... okay on input line 103.
-LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 103.
-LaTeX Font Info: ... okay on input line 103.
-LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 103.
-LaTeX Font Info: ... okay on input line 103.
-LaTeX Font Info: Checking defaults for PD1/pdf/m/n on input line 103.
-LaTeX Font Info: ... okay on input line 103.
-LaTeX Font Info: Checking defaults for PU/pdf/m/n on input line 103.
-LaTeX Font Info: ... okay on input line 103.
-LaTeX Font Info: Try loading font information for T1+ppl on input line 103.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/psnfss/t1ppl.fd
-File: t1ppl.fd 2001/06/04 font definitions for T1/ppl.
-)
-Now handling font encoding TS1 ...
-... processing UTF-8 mapping file for font encoding TS1
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/ts1enc.dfu
-File: ts1enc.dfu 2018/04/05 v1.2c UTF-8 support for inputenc
- defining Unicode char U+00A2 (decimal 162)
- defining Unicode char U+00A3 (decimal 163)
- defining Unicode char U+00A4 (decimal 164)
- defining Unicode char U+00A5 (decimal 165)
- defining Unicode char U+00A6 (decimal 166)
- defining Unicode char U+00A7 (decimal 167)
- defining Unicode char U+00A8 (decimal 168)
- defining Unicode char U+00A9 (decimal 169)
- defining Unicode char U+00AA (decimal 170)
- defining Unicode char U+00AC (decimal 172)
- defining Unicode char U+00AE (decimal 174)
- defining Unicode char U+00AF (decimal 175)
- defining Unicode char U+00B0 (decimal 176)
- defining Unicode char U+00B1 (decimal 177)
- defining Unicode char U+00B2 (decimal 178)
- defining Unicode char U+00B3 (decimal 179)
- defining Unicode char U+00B4 (decimal 180)
- defining Unicode char U+00B5 (decimal 181)
- defining Unicode char U+00B6 (decimal 182)
- defining Unicode char U+00B7 (decimal 183)
- defining Unicode char U+00B9 (decimal 185)
- defining Unicode char U+00BA (decimal 186)
- defining Unicode char U+00BC (decimal 188)
- defining Unicode char U+00BD (decimal 189)
- defining Unicode char U+00BE (decimal 190)
- defining Unicode char U+00D7 (decimal 215)
- defining Unicode char U+00F7 (decimal 247)
- defining Unicode char U+0192 (decimal 402)
- defining Unicode char U+02C7 (decimal 711)
- defining Unicode char U+02D8 (decimal 728)
- defining Unicode char U+02DD (decimal 733)
- defining Unicode char U+0E3F (decimal 3647)
- defining Unicode char U+2016 (decimal 8214)
- defining Unicode char U+2020 (decimal 8224)
- defining Unicode char U+2021 (decimal 8225)
- defining Unicode char U+2022 (decimal 8226)
- defining Unicode char U+2030 (decimal 8240)
- defining Unicode char U+2031 (decimal 8241)
- defining Unicode char U+203B (decimal 8251)
- defining Unicode char U+203D (decimal 8253)
- defining Unicode char U+2044 (decimal 8260)
- defining Unicode char U+204E (decimal 8270)
- defining Unicode char U+2052 (decimal 8274)
- defining Unicode char U+20A1 (decimal 8353)
- defining Unicode char U+20A4 (decimal 8356)
- defining Unicode char U+20A6 (decimal 8358)
- defining Unicode char U+20A9 (decimal 8361)
- defining Unicode char U+20AB (decimal 8363)
- defining Unicode char U+20AC (decimal 8364)
- defining Unicode char U+20B1 (decimal 8369)
- defining Unicode char U+2103 (decimal 8451)
- defining Unicode char U+2116 (decimal 8470)
- defining Unicode char U+2117 (decimal 8471)
- defining Unicode char U+211E (decimal 8478)
- defining Unicode char U+2120 (decimal 8480)
- defining Unicode char U+2122 (decimal 8482)
- defining Unicode char U+2126 (decimal 8486)
- defining Unicode char U+2127 (decimal 8487)
- defining Unicode char U+212E (decimal 8494)
- defining Unicode char U+2190 (decimal 8592)
- defining Unicode char U+2191 (decimal 8593)
- defining Unicode char U+2192 (decimal 8594)
- defining Unicode char U+2193 (decimal 8595)
- defining Unicode char U+2329 (decimal 9001)
- defining Unicode char U+232A (decimal 9002)
- defining Unicode char U+2422 (decimal 9250)
- defining Unicode char U+25E6 (decimal 9702)
- defining Unicode char U+25EF (decimal 9711)
- defining Unicode char U+266A (decimal 9834)
- defining Unicode char U+FEFF (decimal 65279)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/translator/translator-basic-dicti
-onary-English.dict
-Dictionary: translator-basic-dictionary, Language: English
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/siunitx/siunitx-abbreviations.cfg
-File: siunitx-abbreviations.cfg 2017/11/26 v2.7k siunitx: Abbreviated units
-) (/usr/local/texlive/2018/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
-[Loading MPS to PDF converter (version 2006.09.02).]
-\scratchcounter=\count461
-\scratchdimen=\dimen315
-\scratchbox=\box89
-\nofMPsegments=\count462
-\nofMParguments=\count463
-\everyMPshowfont=\toks43
-\MPscratchCnt=\count464
-\MPscratchDim=\dimen316
-\MPnumerator=\count465
-\makeMPintoPDFobject=\count466
-\everyMPtoPDFconversion=\toks44
-) (/usr/local/texlive/2018/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty
-Package: epstopdf-base 2016/05/15 v2.6 Base part for package epstopdf
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/oberdiek/grfext.sty
-Package: grfext 2016/05/16 v1.2 Manage graphics extensions (HO)
-)
-Package epstopdf-base Info: Redefining graphics rule for `.eps' on input line 4
-38.
-Package grfext Info: Graphics extension search list:
-(grfext) [.pdf,.png,.jpg,.mps,.jpeg,.jbig2,.jb2,.PDF,.PNG,.JPG,.JPE
-G,.JBIG2,.JB2,.eps]
-(grfext) \AppendGraphicsExtensions on input line 456.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg
-File: epstopdf-sys.cfg 2010/07/13 v1.3 Configuration of (r)epstopdf for TeX Liv
-e
-))
-Package caption Info: Begin \AtBeginDocument code.
-Package caption Info: hyperref package is loaded.
-Package caption Info: End \AtBeginDocument code.
-
-*geometry* driver: auto-detecting
-*geometry* detected driver: pdftex
-*geometry* verbose mode - [ preamble ] result:
-* driver: pdftex
-* paper: a4paper
-* layout: <same size as paper>
-* layoutoffset:(h,v)=(0.0pt,0.0pt)
-* bindingoffset: 14.22636pt
-* modes: includehead includefoot twoside
-* h-part:(L,W,R)=(71.13188pt, 404.02908pt, 108.12054pt)
-* v-part:(T,H,B)=(42.67912pt, 759.6886pt, 42.67912pt)
-* \paperwidth=597.50787pt
-* \paperheight=845.04684pt
-* \textwidth=404.02908pt
-* \textheight=693.49821pt
-* \oddsidemargin=13.08826pt
-* \evensidemargin=35.85056pt
-* \topmargin=-29.59087pt
-* \headheight=18.85364pt
-* \headsep=19.8738pt
-* \topskip=11.0pt
-* \footskip=27.46295pt
-* \marginparwidth=116.0pt
-* \marginparsep=7.0pt
-* \columnsep=10.0pt
-* \skip\footins=10.0pt plus 4.0pt minus 2.0pt
-* \hoffset=0.0pt
-* \voffset=0.0pt
-* \mag=1000
-* \@twocolumnfalse
-* \@twosidetrue
-* \@mparswitchtrue
-* \@reversemarginfalse
-* (1in=72.27pt=25.4mm, 1cm=28.453pt)
-
-Package scrlayer Info: Setting magic \footheight to \baselineskip while
-(scrlayer) \begin{document} on input line 103.
-Package scrbase Info: activating english \abbrevname on input line 103.
-Package scrbase Info: activating english \byname on input line 103.
-Package scrbase Info: activating english \acknowledgementname on input line 103
-.
-Package scrbase Info: activating english \authorshipname on input line 103.
-Package scrbase Info: activating english \constantsname on input line 103.
-Package scrbase Info: activating english \symbolsname on input line 103.
-\AtBeginShipoutBox=\box90
-Package hyperref Info: Link coloring ON on input line 103.
-(/usr/local/texlive/2018/texmf-dist/tex/latex/hyperref/nameref.sty
-Package: nameref 2016/05/21 v2.44 Cross-referencing by name of section
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/gettitlestring.sty
-Package: gettitlestring 2016/05/16 v1.5 Cleanup title references (HO)
-)
-\c@section@level=\count467
-)
-LaTeX Info: Redefining \ref on input line 103.
-LaTeX Info: Redefining \pageref on input line 103.
-LaTeX Info: Redefining \nameref on input line 103.
-
-(./main.out) (./main.out)
-\@outlinefile=\write6
-\openout6 = `main.out'.
-
-Package biblatex Info: Input encoding 'utf8' detected.
-Package biblatex Info: Automatic encoding selection.
-(biblatex) Assuming data encoding 'utf8'.
-Package biblatex Info: Input encoding 'utf8' specified.
-Package biblatex Info: Data encoding 'utf8' specified.
-(biblatex) No need to reencode data.
-\openout4 = `main-blx.bib'.
-
-Package biblatex Info: Trying to load bibliographic data...
-Package biblatex Info: ... file 'main.bbl' found.
- (./main.bbl
-
-Package biblatex Warning: BibTeX reported the following issues
-(biblatex) with 'RibeiroAgda2017':
-(biblatex) - Can't use 'location' + 'address'.
-
-)
-Package biblatex Info: Reference section=0 on input line 103.
-Package biblatex Info: Reference segment=0 on input line 103.
- ABD: EveryShipout initializing macros
-
-Package pgfplots Warning: running in backwards compatibility mode (unsuitable t
-ick labels; missing features). Consider writing \pgfplotsset{compat=1.16} into
-your preamble.
- on input line 103.
-
-LaTeX Font Info: Try loading font information for OT1+ppl on input line 103.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/psnfss/ot1ppl.fd
-File: ot1ppl.fd 2001/06/04 font definitions for OT1/ppl.
-)
-LaTeX Font Info: Try loading font information for OML+zplm on input line 103
-.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/psnfss/omlzplm.fd
-File: omlzplm.fd 2002/09/08 Fontinst v1.914 font definitions for OML/zplm.
-)
-LaTeX Font Info: Try loading font information for OMS+zplm on input line 103
-.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/psnfss/omszplm.fd
-File: omszplm.fd 2002/09/08 Fontinst v1.914 font definitions for OMS/zplm.
-)
-LaTeX Font Info: Try loading font information for OMX+zplm on input line 103
-.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/psnfss/omxzplm.fd
-File: omxzplm.fd 2002/09/08 Fontinst v1.914 font definitions for OMX/zplm.
-)
-LaTeX Font Info: Try loading font information for OT1+zplm on input line 103
-.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/psnfss/ot1zplm.fd
-File: ot1zplm.fd 2002/09/08 Fontinst v1.914 font definitions for OT1/zplm.
-)
-1: section
-LaTeX Font Info: Font shape `T1/ppl/bx/n' in size <20.74> not available
-(Font) Font shape `T1/ppl/b/n' tried instead on input line 121.
-[1
-
-
-
-{/usr/local/texlive/2018/texmf-var/fonts/map/pdftex/updmap/pdftex.map}]
-[2
-
-]
---------------------
- Declaration of Authorship
---------------------
-LaTeX Font Info: Try loading font information for OMS+ppl on input line 163.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/psnfss/omsppl.fd
-File: omsppl.fd
-)
-LaTeX Font Info: Font shape `OMS/ppl/m/n' in size <10.95> not available
-(Font) Font shape `OMS/cmsy/m/n' tried instead on input line 163.
-
-Underfull \hbox (badness 10000) in paragraph at lines 168--169
-
- []
-
-1: section
-[3] [4
-
-] [5] [6
-
-]
---------------------
- Abstract
---------------------
-LaTeX Font Info: Font shape `T1/ppl/bx/n' in size <10.95> not available
-(Font) Font shape `T1/ppl/b/n' tried instead on input line 194.
-1: section
-[7] [8
-
-]
---------------------
- Acknowledgements
---------------------
-1: section
-[9] [10
-
-]
-LaTeX Font Info: Font shape `T1/ppl/bx/n' in size <24.88> not available
-(Font) Font shape `T1/ppl/b/n' tried instead on input line 243.
- (./main.toc
-Overfull \hbox (9.30757pt too wide) in paragraph at lines 12--12
- [][] [][][]\T1/ppl/m/n/10.95 Engineering and Aca-demic Ap-proaches to Deal wit
-h Catas-trophic Back-
- []
-
-LaTeX Font Info: Try loading font information for T1+cmtt on input line 20.
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/t1cmtt.fd
-File: t1cmtt.fd 2014/09/29 v2.5h Standard LaTeX font definitions
-)
-LaTeX Font Info: Font shape `T1/cmtt/bx/n' in size <10.95> not available
-(Font) Font shape `T1/cmtt/m/n' tried instead on input line 20.
-
-1: section
-[11])
-\tf@toc=\write7
-\openout7 = `main.toc'.
-
- [12] (./main.lof)
-\tf@lof=\write8
-\openout8 = `main.lof'.
-
-
-1: section
-[13
-
-] [14
-
-] (./main.lot)
-\tf@lot=\write9
-\openout9 = `main.lot'.
-
-
-1: section
-[15] [16
-
-]
-1: section
-[17] [18
-
-]
-1: section
-[19] [20
-
-]
-1: section
-[21] [22
-
-]
---------------------
- Dedicatory
---------------------
-1: section
-[23] [24
-
-]
-1: section
-\openout2 = `Chapters/Chapter1.aux'.
-
-(./Chapters/Chapter1.tex
-Chapter 1.
-LaTeX Font Info: Font shape `T1/ppl/bx/n' in size <17.28> not available
-(Font) Font shape `T1/ppl/b/n' tried instead on input line 3.
-
-Underfull \hbox (badness 10000) in paragraph at lines 48--70
-
- []
-
-LaTeX Font Info: Font shape `T1/ppl/bx/n' in size <14.4> not available
-(Font) Font shape `T1/ppl/b/n' tried instead on input line 71.
-PGFPlots: reading {re-js.data}
-PGFPlots: reading {re-python2.data}
-PGFPlots: reading {re-java.data}
-
-Overfull \hbox (6.56624pt too wide) in paragraph at lines 109--175
- []
- []
-
-1: section
-[1
-
-
-] [2] [3]
-LaTeX Font Info: Font shape `T1/ppl/bx/n' in size <12> not available
-(Font) Font shape `T1/ppl/b/n' tried instead on input line 355.
-
-Overfull \hbox (2.81108pt too wide) in paragraph at lines 386--386
-[]\T1/ppl/b/n/14.4 Preliminaries about Lex-ing Us-ing Br-zo-zowski deriva-tives
-
- []
-
-[4] [5] [6]
-
-LaTeX Warning: Citation 'Sulzmann2014' on page 7 undefined on input line 610.
-
-
-Overfull \hbox (4.93819pt too wide) in paragraph at lines 605--613
-\T1/ppl/m/n/10.95 the world with-out sim-pli-fi-ca-tion first for a mo-ment. Su
-lz-mann and Lu []
- []
-
-[7] [8]
-Overfull \hbox (0.91322pt too wide) in paragraph at lines 769--772
-[]\T1/ppl/m/n/10.95 We have men-tioned be-fore that deriva-tives with-out sim-p
-li-fi-ca-tion can get clumsy,
- []
-
-
-LaTeX Warning: Citation 'AusafDyckhoffUrban2016' on page 9 undefined on input l
-ine 783.
-
-[9]
-
-LaTeX Warning: Citation 'Sulzmann2014' on page 10 undefined on input line 876.
-
-[10] [11] [12]
-
-LaTeX Warning: Citation 'Sulzmann2014' on page 13 undefined on input line 1205.
-
-
-
-LaTeX Warning: Citation 'AusafDyckhoffUrban2016' on page 13 undefined on input
-line 1215.
-
-[13]
-Overfull \hbox (9.67143pt too wide) in paragraph at lines 1225--1232
- []
- []
-
-
-LaTeX Warning: Citation 'AusafDyckhoffUrban2016' on page 14 undefined on input
-line 1243.
-
-
-LaTeX Warning: Citation 'Sulzmann2014' on page 14 undefined on input line 1250.
-
-
-
-Overfull \hbox (38.38536pt too wide) in paragraph at lines 1249--1262
-[]\T1/ppl/m/n/10.95 Sulzmann and Lu over-come this ``growth prob-lem'' in a sec
--ond al-go-rithm []
- []
-
-
-LaTeX Warning: Citation 'Sulzmann2014' on page 14 undefined on input line 1269.
-
-
-[14]
-Overfull \hbox (11.45154pt too wide) in paragraph at lines 1293--1293
-[]\T1/ppl/b/n/14.4 Engineering and Aca-demic Ap-proaches to Deal with Catas-
- []
-
-
-LaTeX Warning: Citation 'Rathnayake2014StaticAF' on page 15 undefined on input
-line 1302.
-
-
-LaTeX Warning: Citation 'Weideman2017Static' on page 15 undefined on input line
- 1311.
-
-
-Overfull \hbox (0.98518pt too wide) in paragraph at lines 1300--1312
-\T1/ppl/m/n/10.95 poen-tial be-havi-ous. Rath-nayake and Thi-elecke ([]) pro-po
-sed
- []
-
-
-Package scrlayer-scrpage Warning: \headheight to low.
-(scrlayer-scrpage) At least 27.2pt needed,
-(scrlayer-scrpage) but only 18.85364pt found.
-(scrlayer-scrpage) I'll enlarge \headheight, for further
-(scrlayer-scrpage) processing, but you should do this yourself,
-(scrlayer-scrpage) e.g., setting geometry's option
-(scrlayer-scrpage) `head=27.2pt'.
-(scrlayer-scrpage) I'll also decrease \topmargin on input line 1
-359.
-
-
-Overfull \vbox (8.34636pt too high) has occurred while \output is active []
-
-
-[15] [16]
-LaTeX Font Info: Font shape `T1/cmtt/bx/n' in size <14.4> not available
-(Font) Font shape `T1/cmtt/m/n' tried instead on input line 1413.
-
-
-LaTeX Font Warning: Font shape `T1/cmtt/bx/sl' undefined
-(Font) using `T1/cmtt/bx/n' instead on input line 1428.
-
-[17]
-Overfull \hbox (8.37132pt too wide) in paragraph at lines 1457--1458
-\T1/ppl/m/n/10.95 sided print-ing is as sim-ple as un-com-ment-ing the \T1/cmtt
-/m/it/10.95 oneside \T1/ppl/m/n/10.95 op-tion of the \T1/cmtt/m/n/10.95 documen
-tclass
- []
-
-[18]
-
-LaTeX Warning: Citation 'Reference1' on page 19 undefined on input line 1471.
-
-
-LaTeX Warning: Citation 'Reference2' on page 19 undefined on input line 1471.
-
-
-LaTeX Warning: Citation 'Reference1' on page 19 undefined on input line 1471.
-
-
-LaTeX Warning: Citation 'Reference3' on page 19 undefined on input line 1471.
-
-[19] [20]
-<Figures/Electron.pdf, id=468, 398.3386pt x 284.52756pt>
-File: Figures/Electron.pdf Graphic file (type pdf)
-<use Figures/Electron.pdf>
-Package pdftex.def Info: Figures/Electron.pdf used on input line 1539.
-(pdftex.def) Requested size: 398.33762pt x 284.52686pt.
- [21 <./Figures/Electron.pdf>]
-Overfull \hbox (0.90797pt too wide) in paragraph at lines 1585--1586
-\T1/ppl/m/n/10.95 au-to-mat-i-cally builds a ta-ble of Con-tents by look-ing at
- all the [][]\T1/cmtt/m/n/10.95 \chapter{}[]\T1/ppl/m/n/10.95 , [][]\T1/cmtt/m/
-n/10.95 \section{}
- []
-
-
-Overfull \hbox (0.45015pt too wide) in paragraph at lines 1587--1588
-[]\T1/ppl/m/n/10.95 The Ta-ble of Con-tents should only list the sec-tions to t
-hree (3) lev-els. A [][]\T1/cmtt/m/n/10.95 chapter{}
- []
-
-) [22]
-\openout2 = `Chapters/Chapter2.aux'.
-
- (./Chapters/Chapter2.tex
-Chapter 2.
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `math shift' on input line 11.
-
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `\delimiter' on input line 11.
-
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `math shift' on input line 11.
-
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `math shift' on input line 18.
-
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `\delimiter' on input line 18.
-
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `math shift' on input line 18.
-
-
-Underfull \hbox (badness 10000) in paragraph at lines 40--44
-
- []
-
-1: section
-[23
-
-
-
-]) [24]
-\openout2 = `Chapters/Chapter3.aux'.
-
- (./Chapters/Chapter3.tex
-Chapter 3.
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `math shift' on input line 13.
-
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `math shift' on input line 13.
-
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `math shift' on input line 28.
-
-
-Package hyperref Warning: Token not allowed in a PDF string (Unicode):
-(hyperref) removing `math shift' on input line 28.
-
-)
-1: section
-[25
-
-
-
-]
-\openout2 = `Appendices/AppendixA.aux'.
-
- (./Appendices/AppendixA.tex [26
-
-
-
-]
-Appendix A.
-)
-1: section
-[27] [28
-
-
-]
-Overfull \hbox (2.23135pt too wide) in paragraph at lines 353--353
-[][]\T1/ppl/m/n/10.95 Coquand, T. and V. Siles (2011). ^^P A De-ci-sion Pro-ce
--dure for Reg-u-lar Ex-pres-sion Equiv-
- []
-
-1: section
-[29]
-Package atveryend Info: Empty hook `BeforeClearDocument' on input line 357.
-Package atveryend Info: Empty hook `AfterLastShipout' on input line 357.
- (./main.aux (./Chapters/Chapter1.aux) (./Chapters/Chapter2.aux)
-(./Chapters/Chapter3.aux) (./Appendices/AppendixA.aux))
-Package atveryend Info: Executing hook `AtVeryEndDocument' on input line 357.
-Package atveryend Info: Executing hook `AtEndAfterFileList' on input line 357.
-
-
-Package rerunfilecheck Warning: File `main.out' has changed.
-(rerunfilecheck) Rerun to get outlines right
-(rerunfilecheck) or use package `bookmark'.
-
-Package rerunfilecheck Info: Checksums for `main.out':
-(rerunfilecheck) Before: 7C4FAB9392C071FEE9D94ACC44DE54BD;7293
-(rerunfilecheck) After: 2BB1A368827AF4B7D099B0B43EF92AAA;7417.
-
-LaTeX Font Warning: Some font shapes were not available, defaults substituted.
-
-
-LaTeX Warning: There were undefined references.
-
-
-LaTeX Warning: There were multiply-defined labels.
-
-
-Package biblatex Warning: Please (re)run BibTeX on the file(s):
-(biblatex) main
-(biblatex) and rerun LaTeX afterwards.
-
-Package logreq Info: Writing requests to 'main.run.xml'.
-\openout1 = `main.run.xml'.
-
- )
-Here is how much of TeX's memory you used:
- 56764 strings out of 492649
- 1316779 string characters out of 6129623
- 1611358 words of memory out of 5000000
- 59750 multiletter control sequences out of 15000+600000
- 617554 words of font info for 196 fonts, out of 8000000 for 9000
- 1141 hyphenation exceptions out of 8191
- 74i,24n,109p,10377b,2424s stack positions out of 5000i,500n,10000p,200000b,80000s
-{/usr/local/texlive/2018/texmf-dist/fonts/enc/dvips/cm-super/cm-super-t1.enc}
-{/usr/local/texlive/2018/texmf-dist/fonts/enc/dvips/base/8r.enc}</usr/local/tex
-live/2018/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb></usr/local/texl
-ive/2018/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/local/texliv
-e/2018/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/local/texlive
-/2018/texmf-dist/fonts/type1/public/mathpazo/fplmr.pfb></usr/local/texlive/2018
-/texmf-dist/fonts/type1/public/mathpazo/fplmri.pfb></usr/local/texlive/2018/tex
-mf-dist/fonts/type1/public/cm-super/sfit1095.pfb></usr/local/texlive/2018/texmf
--dist/fonts/type1/public/cm-super/sftt1000.pfb></usr/local/texlive/2018/texmf-d
-ist/fonts/type1/public/cm-super/sftt1095.pfb></usr/local/texlive/2018/texmf-dis
-t/fonts/type1/public/cm-super/sftt1440.pfb></usr/local/texlive/2018/texmf-dist/
-fonts/type1/urw/palatino/uplb8a.pfb></usr/local/texlive/2018/texmf-dist/fonts/t
-ype1/urw/palatino/uplr8a.pfb></usr/local/texlive/2018/texmf-dist/fonts/type1/ur
-w/palatino/uplr8a.pfb></usr/local/texlive/2018/texmf-dist/fonts/type1/urw/palat
-ino/uplri8a.pfb>
-Output written on main.pdf (53 pages, 352872 bytes).
-PDF statistics:
- 651 PDF objects out of 1000 (max. 8388607)
- 568 compressed objects within 6 object streams
- 123 named destinations out of 1000 (max. 500000)
- 362 words of extra memory for PDF output out of 10000 (max. 10000000)
-
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.lot Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,7 +0,0 @@
-\boolfalse {citerequest}\boolfalse {citetracker}\boolfalse {pagetracker}\boolfalse {backtracker}\relax
-\babel@toc {english}{}
-\addvspace {10\p@ }
-\contentsline {table}{\numberline {1.1}{\ignorespaces The effects of treatments X and Y on the four groups studied.\relax }}{20}{table.caption.43}
-\addvspace {10\p@ }
-\addvspace {10\p@ }
-\addvspace {10\p@ }
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.out Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,43 +0,0 @@
-\BOOKMARK [0][-]{section*.1}{\376\377\000D\000e\000c\000l\000a\000r\000a\000t\000i\000o\000n\000\040\000o\000f\000\040\000A\000u\000t\000h\000o\000r\000s\000h\000i\000p}{}% 1
-\BOOKMARK [0][-]{section*.2}{\376\377\000A\000b\000s\000t\000r\000a\000c\000t}{}% 2
-\BOOKMARK [0][-]{section*.3}{\376\377\000A\000c\000k\000n\000o\000w\000l\000e\000d\000g\000e\000m\000e\000n\000t\000s}{}% 3
-\BOOKMARK [0][-]{chapter.14}{\376\377\000P\000O\000S\000I\000X\000\040\000L\000e\000x\000i\000n\000g\000\040\000W\000i\000t\000h\000\040\000B\000i\000t\000-\000c\000o\000d\000e\000s}{}% 4
-\BOOKMARK [1][-]{section.15}{\376\377\000I\000n\000t\000r\000o\000d\000u\000c\000t\000i\000o\000n\000\040\000T\000o\000\040\000R\000e\000g\000e\000x\000e\000s}{chapter.14}% 5
-\BOOKMARK [2][-]{subsection.16}{\376\377\000B\000a\000c\000k\000\040\000R\000e\000f\000e\000r\000e\000n\000c\000e\000s\000\040\000i\000n\000\040\000R\000e\000g\000e\000x\040\023\000N\000o\000n\000-\000R\000e\000g\000u\000l\000a\000r\000\040\000p\000a\000r\000t}{section.15}% 6
-\BOOKMARK [1][-]{section.17}{\376\377\000O\000u\000r\000\040\000S\000o\000l\000u\000t\000i\000o\000n\040\023\000B\000r\000z\000o\000z\000o\000w\000s\000k\000i\000\040\000D\000e\000r\000i\000v\000a\000t\000i\000v\000e\000s}{chapter.14}% 7
-\BOOKMARK [1][-]{section.18}{\376\377\000P\000r\000e\000l\000i\000m\000i\000n\000a\000r\000i\000e\000s\000\040\000a\000b\000o\000u\000t\000\040\000L\000e\000x\000i\000n\000g\000\040\000U\000s\000i\000n\000g\000\040\000B\000r\000z\000o\000z\000o\000w\000s\000k\000i\000\040\000d\000e\000r\000i\000v\000a\000t\000i\000v\000e\000s}{chapter.14}% 8
-\BOOKMARK [1][-]{section.25}{\376\377\000B\000a\000c\000k\000g\000o\000u\000n\000d}{chapter.14}% 9
-\BOOKMARK [1][-]{section.26}{\376\377\000E\000n\000g\000i\000n\000e\000e\000r\000i\000n\000g\000\040\000a\000n\000d\000\040\000A\000c\000a\000d\000e\000m\000i\000c\000\040\000A\000p\000p\000r\000o\000a\000c\000h\000e\000s\000\040\000t\000o\000\040\000D\000e\000a\000l\000\040\000w\000i\000t\000h\000\040\000C\000a\000t\000a\000s\000t\000r\000o\000p\000h\000i\000c\000\040\000B\000a\000c\000k\000t\000r\000a\000c\000k\000i\000n\000g}{chapter.14}% 10
-\BOOKMARK [2][-]{subsection.27}{\376\377\000D\000F\000A\000\040\000A\000p\000p\000r\000o\000a\000c\000h}{section.26}% 11
-\BOOKMARK [2][-]{subsection.28}{\376\377\000N\000F\000A\000\040\000A\000p\000p\000r\000o\000a\000c\000h}{section.26}% 12
-\BOOKMARK [1][-]{section.29}{\376\377\000O\000u\000r\000\040\000A\000p\000p\000r\000o\000a\000c\000h}{chapter.14}% 13
-\BOOKMARK [2][-]{subsection.30}{\376\377\000E\000x\000i\000s\000t\000i\000n\000g\000\040\000W\000o\000r\000k}{section.29}% 14
-\BOOKMARK [1][-]{section.31}{\376\377\000W\000h\000a\000t\000\040\000t\000h\000i\000s\000\040\000T\000e\000m\000p\000l\000a\000t\000e\000\040\000I\000n\000c\000l\000u\000d\000e\000s}{chapter.14}% 15
-\BOOKMARK [2][-]{subsection.32}{\376\377\000F\000o\000l\000d\000e\000r\000s}{section.31}% 16
-\BOOKMARK [2][-]{subsection.33}{\376\377\000F\000i\000l\000e\000s}{section.31}% 17
-\BOOKMARK [1][-]{section.34}{\376\377\000F\000i\000l\000l\000i\000n\000g\000\040\000i\000n\000\040\000Y\000o\000u\000r\000\040\000I\000n\000f\000o\000r\000m\000a\000t\000i\000o\000n\000\040\000i\000n\000\040\000t\000h\000e\000\040\000m\000a\000i\000n\000.\000t\000e\000x\000\040\000F\000i\000l\000e}{chapter.14}% 18
-\BOOKMARK [1][-]{section.35}{\376\377\000T\000h\000e\000\040\000m\000a\000i\000n\000.\000t\000e\000x\000\040\000F\000i\000l\000e\000\040\000E\000x\000p\000l\000a\000i\000n\000e\000d}{chapter.14}% 19
-\BOOKMARK [1][-]{section.36}{\376\377\000T\000h\000e\000s\000i\000s\000\040\000F\000e\000a\000t\000u\000r\000e\000s\000\040\000a\000n\000d\000\040\000C\000o\000n\000v\000e\000n\000t\000i\000o\000n\000s}{chapter.14}% 20
-\BOOKMARK [2][-]{subsection.37}{\376\377\000P\000r\000i\000n\000t\000i\000n\000g\000\040\000F\000o\000r\000m\000a\000t}{section.36}% 21
-\BOOKMARK [2][-]{subsection.38}{\376\377\000U\000s\000i\000n\000g\000\040\000U\000S\000\040\000L\000e\000t\000t\000e\000r\000\040\000P\000a\000p\000e\000r}{section.36}% 22
-\BOOKMARK [2][-]{subsection.39}{\376\377\000R\000e\000f\000e\000r\000e\000n\000c\000e\000s}{section.36}% 23
-\BOOKMARK [3][-]{section*.41}{\376\377\000A\000\040\000N\000o\000t\000e\000\040\000o\000n\000\040\000b\000i\000b\000t\000e\000x}{subsection.39}% 24
-\BOOKMARK [2][-]{subsection.42}{\376\377\000T\000a\000b\000l\000e\000s}{section.36}% 25
-\BOOKMARK [2][-]{subsection.44}{\376\377\000F\000i\000g\000u\000r\000e\000s}{section.36}% 26
-\BOOKMARK [2][-]{subsection.46}{\376\377\000T\000y\000p\000e\000s\000e\000t\000t\000i\000n\000g\000\040\000m\000a\000t\000h\000e\000m\000a\000t\000i\000c\000s}{section.36}% 27
-\BOOKMARK [1][-]{section.48}{\376\377\000S\000e\000c\000t\000i\000o\000n\000i\000n\000g\000\040\000a\000n\000d\000\040\000S\000u\000b\000s\000e\000c\000t\000i\000o\000n\000i\000n\000g}{chapter.14}% 28
-\BOOKMARK [1][-]{section.49}{\376\377\000I\000n\000\040\000C\000l\000o\000s\000i\000n\000g}{chapter.14}% 29
-\BOOKMARK [0][-]{chapter.50}{\376\377\000C\000h\000a\000p\000t\000e\000r\000\040\000T\000i\000t\000l\000e\000\040\000H\000e\000r\000e}{}% 30
-\BOOKMARK [1][-]{section.51}{\376\377\000P\000r\000o\000p\000e\000r\000t\000i\000e\000s\000\040\000o\000f\000\040\000"\0000\0002\0006\000E\0003\0000\000F\000\040\000c}{chapter.50}% 31
-\BOOKMARK [2][-]{subsection.52}{\376\377\000f\000u\000n\000c\000t\000i\000o\000n\000\040\000"\0000\0002\0006\000E\0003\0000\000F\000\040\000c\000\040\000i\000s\000\040\000n\000o\000t\000\040\0001\000-\000t\000o\000-\0001}{section.51}% 32
-\BOOKMARK [2][-]{subsection.53}{\376\377\000S\000u\000b\000s\000e\000c\000t\000i\000o\000n\000\040\0001}{section.51}% 33
-\BOOKMARK [2][-]{subsection.54}{\376\377\000S\000u\000b\000s\000e\000c\000t\000i\000o\000n\000\040\0002}{section.51}% 34
-\BOOKMARK [1][-]{section.55}{\376\377\000M\000a\000i\000n\000\040\000S\000e\000c\000t\000i\000o\000n\000\040\0002}{chapter.50}% 35
-\BOOKMARK [0][-]{chapter.56}{\376\377\000C\000o\000m\000m\000o\000n\000\040\000I\000d\000e\000n\000t\000i\000t\000i\000e\000s\000\040\000I\000n\000\040\000S\000i\000m\000p\000l\000i\000f\000i\000c\000a\000t\000i\000o\000n\000-\000R\000e\000l\000a\000t\000e\000d\000\040\000F\000u\000n\000c\000t\000i\000o\000n\000s}{}% 36
-\BOOKMARK [1][-]{section.57}{\376\377\000I\000d\000e\000m\000p\000o\000t\000e\000n\000c\000y\000\040\000o\000f\000\040\000s\000i\000m\000p}{chapter.56}% 37
-\BOOKMARK [2][-]{subsection.59}{\376\377\000S\000y\000n\000t\000a\000c\000t\000i\000c\000\040\000E\000q\000u\000i\000v\000a\000l\000e\000n\000c\000e\000\040\000U\000n\000d\000e\000r\000\040\000s\000i\000m\000p}{section.57}% 38
-\BOOKMARK [2][-]{subsection.60}{\376\377\000S\000u\000b\000s\000e\000c\000t\000i\000o\000n\000\040\0002}{section.57}% 39
-\BOOKMARK [1][-]{section.61}{\376\377\000M\000a\000i\000n\000\040\000S\000e\000c\000t\000i\000o\000n\000\040\0002}{chapter.56}% 40
-\BOOKMARK [0][-]{appendix.62}{\376\377\000F\000r\000e\000q\000u\000e\000n\000t\000l\000y\000\040\000A\000s\000k\000e\000d\000\040\000Q\000u\000e\000s\000t\000i\000o\000n\000s}{}% 41
-\BOOKMARK [1][-]{section.63}{\376\377\000H\000o\000w\000\040\000d\000o\000\040\000I\000\040\000c\000h\000a\000n\000g\000e\000\040\000t\000h\000e\000\040\000c\000o\000l\000o\000r\000s\000\040\000o\000f\000\040\000l\000i\000n\000k\000s\000?}{appendix.62}% 42
-\BOOKMARK [0][-]{appendix*.64}{\376\377\000B\000i\000b\000l\000i\000o\000g\000r\000a\000p\000h\000y}{}% 43
Binary file PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.pdf has changed
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.run.xml Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,93 +0,0 @@
-<?xml version="1.0" standalone="yes"?>
-<!-- logreq request file -->
-<!-- logreq version 1.0 / dtd version 1.0 -->
-<!-- Do not edit this file! -->
-<!DOCTYPE requests [
- <!ELEMENT requests (internal | external)*>
- <!ELEMENT internal (generic, (provides | requires)*)>
- <!ELEMENT external (generic, cmdline?, input?, output?, (provides | requires)*)>
- <!ELEMENT cmdline (binary, (option | infile | outfile)*)>
- <!ELEMENT input (file)+>
- <!ELEMENT output (file)+>
- <!ELEMENT provides (file)+>
- <!ELEMENT requires (file)+>
- <!ELEMENT generic (#PCDATA)>
- <!ELEMENT binary (#PCDATA)>
- <!ELEMENT option (#PCDATA)>
- <!ELEMENT infile (#PCDATA)>
- <!ELEMENT outfile (#PCDATA)>
- <!ELEMENT file (#PCDATA)>
- <!ATTLIST requests
- version CDATA #REQUIRED
- >
- <!ATTLIST internal
- package CDATA #REQUIRED
- priority (9) #REQUIRED
- active (0 | 1) #REQUIRED
- >
- <!ATTLIST external
- package CDATA #REQUIRED
- priority (1 | 2 | 3 | 4 | 5 | 6 | 7 | 8) #REQUIRED
- active (0 | 1) #REQUIRED
- >
- <!ATTLIST provides
- type (static | dynamic | editable) #REQUIRED
- >
- <!ATTLIST requires
- type (static | dynamic | editable) #REQUIRED
- >
- <!ATTLIST file
- type CDATA #IMPLIED
- >
-]>
-<requests version="1.0">
- <internal package="biblatex" priority="9" active="1">
- <generic>latex</generic>
- <provides type="dynamic">
- <file>main.aux</file>
- <file>main-blx.bib</file>
- </provides>
- <requires type="dynamic">
- <file>main.bbl</file>
- </requires>
- <requires type="static">
- <file>blx-dm.def</file>
- <file>blx-compat.def</file>
- <file>blx-bibtex.def</file>
- <file>biblatex.def</file>
- <file>blx-natbib.def</file>
- <file>standard.bbx</file>
- <file>authoryear.bbx</file>
- <file>authoryear.cbx</file>
- <file>biblatex.cfg</file>
- <file>english.lbx</file>
- </requires>
- </internal>
- <external package="biblatex" priority="5" active="1">
- <generic>bibtex</generic>
- <cmdline>
- <binary>bibtex</binary>
- <option>-min-crossrefs 2</option>
- <infile>main</infile>
- </cmdline>
- <input>
- <file>main.aux</file>
- </input>
- <output>
- <file>main.bbl</file>
- </output>
- <provides type="dynamic">
- <file>main.bbl</file>
- </provides>
- <requires type="dynamic">
- <file>main.aux</file>
- <file>main-blx.bib</file>
- </requires>
- <requires type="editable">
- <file>example.bib</file>
- </requires>
- <requires type="static">
- <file>biblatex.bst</file>
- </requires>
- </external>
-</requests>
Binary file PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.synctex.gz has changed
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.tex Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,357 +0,0 @@
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% Masters/Doctoral Thesis
-% LaTeX Template
-% Version 2.5 (27/8/17)
-%
-% This template was downloaded from:
-% http://www.LaTeXTemplates.com
-%
-% Version 2.x major modifications by:
-% Vel (vel@latextemplates.com)
-%
-% This template is based on a template by:
-% Steve Gunn (http://users.ecs.soton.ac.uk/srg/softwaretools/document/templates/)
-% Sunil Patel (http://www.sunilpatel.co.uk/thesis-template/)
-%
-% Template license:
-% CC BY-NC-SA 3.0 (http://creativecommons.org/licenses/by-nc-sa/3.0/)
-%
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-
-%----------------------------------------------------------------------------------------
-% PACKAGES AND OTHER DOCUMENT CONFIGURATIONS
-%----------------------------------------------------------------------------------------
-
-\documentclass[
-11pt, % The default document font size, options: 10pt, 11pt, 12pt
-%oneside, % Two side (alternating margins) for binding by default, uncomment to switch to one side
-english, % ngerman for German
-singlespacing, % Single line spacing, alternatives: onehalfspacing or doublespacing
-%draft, % Uncomment to enable draft mode (no pictures, no links, overfull hboxes indicated)
-%nolistspacing, % If the document is onehalfspacing or doublespacing, uncomment this to set spacing in lists to single
-%liststotoc, % Uncomment to add the list of figures/tables/etc to the table of contents
-%toctotoc, % Uncomment to add the main table of contents to the table of contents
-%parskip, % Uncomment to add space between paragraphs
-%nohyperref, % Uncomment to not load the hyperref package
-headsepline, % Uncomment to get a line under the header
-%chapterinoneline, % Uncomment to place the chapter title next to the number on one line
-%consistentlayout, % Uncomment to change the layout of the declaration, abstract and acknowledgements pages to match the default layout
-]{MastersDoctoralThesis} % The class file specifying the document structure
-
-\usepackage[utf8]{inputenc} % Required for inputting international characters
-\usepackage[T1]{fontenc} % Output font encoding for international characters
-
-\usepackage{mathpazo} % Use the Palatino font by default
-\usepackage{hyperref}
-\usepackage[backend=bibtex,style=authoryear,natbib=true]{biblatex} % Use the bibtex backend with the authoryear citation style (which resembles APA)
-
-\addbibresource{example.bib} % The filename of the bibliography
-
-\usepackage[autostyle=true]{csquotes} % Required to generate language-dependent quotes in the bibliography
-
-%My Newly added Libraries in addition to template
-\usepackage{graphic}
-\usepackage{data}
-
-%\usepackage{algorithm}
-\usepackage{amsmath}
-\usepackage[noend]{algpseudocode}
-\usepackage{enumitem}
-\usepackage{nccmath}
-\usepackage{tikz-cd}
-\usepackage{tikz}
-\usetikzlibrary{automata, positioning}
-
-%----------------------------------------------------------------------------------------
-% MARGIN SETTINGS
-%----------------------------------------------------------------------------------------
-
-\geometry{
- paper=a4paper, % Change to letterpaper for US letter
- inner=2.5cm, % Inner margin
- outer=3.8cm, % Outer margin
- bindingoffset=.5cm, % Binding offset
- top=1.5cm, % Top margin
- bottom=1.5cm, % Bottom margin
- %showframe, % Uncomment to show how the type block is set on the page
-}
-
-%----------------------------------------------------------------------------------------
-% THESIS INFORMATION
-%----------------------------------------------------------------------------------------
-
-\thesistitle{POSIX Regular Expression Matching and Lexing} % Your thesis title, this is used in the title and abstract, print it elsewhere with \ttitle
-\supervisor{Dr. Christian \textsc{Urban}} % Your supervisor's name, this is used in the title page, print it elsewhere with \supname
-\examiner{} % Your examiner's name, this is not currently used anywhere in the template, print it elsewhere with \examname
-\degree{Doctor of Philosophy} % Your degree name, this is used in the title page and abstract, print it elsewhere with \degreename
-\author{Chengsong \textsc{Tan}} % Your name, this is used in the title page and abstract, print it elsewhere with \authorname
-\addresses{} % Your address, this is not currently used anywhere in the template, print it elsewhere with \addressname
-
-\subject{Computer Science} % Your subject area, this is not currently used anywhere in the template, print it elsewhere with \subjectname
-\keywords{} % Keywords for your thesis, this is not currently used anywhere in the template, print it elsewhere with \keywordnames
-\university{\href{https://www.kcl.ac.uk}{King's College London}} % Your university's name and URL, this is used in the title page and abstract, print it elsewhere with \univname
-\department{\href{https://www.kcl.ac.uk/informatics}{Department or Informatics}} % Your department's name and URL, this is used in the title page and abstract, print it elsewhere with \deptname
-\group{\href{https://www.kcl.ac.uk/research/ssy}{Software Systems}} % Your research group's name and URL, this is used in the title page, print it elsewhere with \groupname
-\faculty{\href{http://faculty.university.com}{Chengsong Tan}} % Your faculty's name and URL, this is used in the title page and abstract, print it elsewhere with \facname
-
-\AtBeginDocument{
-\hypersetup{pdftitle=\ttitle} % Set the PDF's title to your title
-\hypersetup{pdfauthor=\authorname} % Set the PDF's author to your name
-\hypersetup{pdfkeywords=\keywordnames} % Set the PDF's keywords to your keywords
-}
-
-\begin{document}
-
-\frontmatter % Use roman page numbering style (i, ii, iii, iv...) for the pre-content pages
-
-\pagestyle{plain} % Default to the plain heading style until the thesis style is called for the body content
-
-%----------------------------------------------------------------------------------------
-% TITLE PAGE
-%----------------------------------------------------------------------------------------
-
-\begin{titlepage}
-\begin{center}
-
-\vspace*{.06\textheight}
-{\scshape\LARGE \univname\par}\vspace{1.5cm} % University name
-\textsc{\Large Doctoral Thesis}\\[0.5cm] % Thesis type
-
-\HRule \\[0.4cm] % Horizontal line
-{\huge \bfseries \ttitle\par}\vspace{0.4cm} % Thesis title
-\HRule \\[1.5cm] % Horizontal line
-
-\begin{minipage}[t]{0.4\textwidth}
-\begin{flushleft} \large
-\emph{Author:}\\
-\href{https://kclpure.kcl.ac.uk/portal/en/persons/chengsong-tan(a63b381b-04bc-4cd7-beea-beb3e96cb153).html}{\authorname} % Author name - remove the \href bracket to remove the link
-\end{flushleft}
-\end{minipage}
-
-
-\begin{minipage}[t]{0.4\textwidth}
-\begin{flushright} \large
-\emph{Supervisor:} \\
-\href{https://www.kcl.ac.uk/people/christian-urban}{\supname} % Supervisor name - remove the \href bracket to remove the link
-\end{flushright}
-\end{minipage}\\[3cm]
-
-\vfill
-
-\large \textit{A thesis submitted in fulfillment of the requirements\\ for the degree of \degreename}\\[0.3cm] % University requirement text
-\textit{in the}\\[0.4cm]
-\groupname\\\deptname\\[2cm] % Research group name and department name
-
-\vfill
-
-{\large \today}\\[4cm] % Date
-%\includegraphics{Logo} % University/department logo - uncomment to place it
-
-\vfill
-\end{center}
-\end{titlepage}
-
-%----------------------------------------------------------------------------------------
-% DECLARATION PAGE
-%----------------------------------------------------------------------------------------
-
-\begin{declaration}
-\addchaptertocentry{\authorshipname} % Add the declaration to the table of contents
-\noindent I, \authorname, declare that this thesis titled, \enquote{\ttitle} and the work presented in it are my own. I confirm that:
-
-\begin{itemize}
-\item This work was done wholly or mainly while in candidature for a research degree at this University.
-\item Where any part of this thesis has previously been submitted for a degree or any other qualification at this University or any other institution, this has been clearly stated.
-\item Where I have consulted the published work of others, this is always clearly attributed.
-\item Where I have quoted from the work of others, the source is always given. With the exception of such quotations, this thesis is entirely my own work.
-\item I have acknowledged all main sources of help.
-\item Where the thesis is based on work done by myself jointly with others, I have made clear exactly what was done by others and what I have contributed myself.\\
-\end{itemize}
-
-\noindent Signed:\\
-\rule[0.5em]{25em}{0.5pt} % This prints a line for the signature
-
-\noindent Date:\\
-\rule[0.5em]{25em}{0.5pt} % This prints a line to write the date
-\end{declaration}
-
-\cleardoublepage
-
-%----------------------------------------------------------------------------------------
-% QUOTATION PAGE
-%----------------------------------------------------------------------------------------
-
-\vspace*{0.2\textheight}
-
-\noindent\enquote{\itshape Thanks to my solid academic training, today I can write hundreds of words on virtually any topic without possessing a shred of information, which is how I got a good job in journalism.}\bigbreak
-
-\hfill Dave Barry
-
-%----------------------------------------------------------------------------------------
-% ABSTRACT PAGE
-%----------------------------------------------------------------------------------------
-
-\begin{abstract}
-\addchaptertocentry{\abstractname} % Add the abstract to the table of contents
-This work is a combination of functional algorithms
-and formal methods.
-Regular expression matching and lexing has been
- widely-used and well-implemented
-in software industry.
-
-Theoretical results say that regular expression matching
-should be linear with respect to the input.
-Under a certain class of regular expressions and inputs though,
-practical implementations suffer from non-linear or even
-exponential running time,
-allowing a ReDoS (regular expression denial-of-service ) attack.
-
-
-The reason behind is that regex libraries in popular language engines
- often want to support richer constructs
-than the most basic regular expressions, and lexing rather than matching
-is needed for sub-match extraction.
-
-This work aims to address the above vulnerability by the combination
-of Brzozowski's derivatives and interactive theorem proving. We give an
-improved version of Sulzmann and Lu's bit-coded algorithm using
-derivatives, which come with a formal guarantee in terms of correctness and
-running time as an Isabelle/HOL proof.
-Then we improve the algorithm with an even stronger version of
-simplification, and prove a time bound linear to input and
-cubic to regular expression size using a technique by
-Antimirov.
-
-
-
-
-\end{abstract}
-
-%----------------------------------------------------------------------------------------
-% ACKNOWLEDGEMENTS
-%----------------------------------------------------------------------------------------
-
-\begin{acknowledgements}
-\addchaptertocentry{\acknowledgementname} % Add the acknowledgements to the table of contents
-The acknowledgments and the people to thank go here, don't forget to include your project advisor\ldots
-\end{acknowledgements}
-
-%----------------------------------------------------------------------------------------
-% LIST OF CONTENTS/FIGURES/TABLES PAGES
-%----------------------------------------------------------------------------------------
-
-\tableofcontents % Prints the main table of contents
-
-\listoffigures % Prints the list of figures
-
-\listoftables % Prints the list of tables
-
-%----------------------------------------------------------------------------------------
-% ABBREVIATIONS
-%----------------------------------------------------------------------------------------
-
-\begin{abbreviations}{ll} % Include a list of abbreviations (a table of two columns)
-
-\textbf{LAH} & \textbf{L}ist \textbf{A}bbreviations \textbf{H}ere\\
-\textbf{WSF} & \textbf{W}hat (it) \textbf{S}tands \textbf{F}or\\
-
-\newcommand{\dn}{\stackrel{\mbox{\scriptsize def}}{=}}%
-\newcommand{\ZERO}{\mbox{\bf 0}}
-\newcommand{\ONE}{\mbox{\bf 1}}
-\def\lexer{\mathit{lexer}}
-\def\mkeps{\mathit{mkeps}}
-
-\def\DFA{\textit{DFA}}
-\def\bmkeps{\textit{bmkeps}}
-\def\retrieve{\textit{retrieve}}
-\def\blexer{\textit{blexer}}
-\def\flex{\textit{flex}}
-\def\inj{\mathit{inj}}
-\def\Empty{\mathit{Empty}}
-\def\Left{\mathit{Left}}
-\def\Right{\mathit{Right}}
-\def\Stars{\mathit{Stars}}
-\def\Char{\mathit{Char}}
-\def\Seq{\mathit{Seq}}
-\def\Der{\mathit{Der}}
-\def\nullable{\mathit{nullable}}
-\def\Z{\mathit{Z}}
-\def\S{\mathit{S}}
-\def\rup{r^\uparrow}
-
-\end{abbreviations}
-
-%----------------------------------------------------------------------------------------
-% PHYSICAL CONSTANTS/OTHER DEFINITIONS
-%----------------------------------------------------------------------------------------
-
-\begin{constants}{lr@{${}={}$}l} % The list of physical constants is a three column table
-
-% The \SI{}{} command is provided by the siunitx package, see its documentation for instructions on how to use it
-
-Speed of Light & $c_{0}$ & \SI{2.99792458e8}{\meter\per\second} (exact)\\
-%Constant Name & $Symbol$ & $Constant Value$ with units\\
-
-\end{constants}
-
-%----------------------------------------------------------------------------------------
-% SYMBOLS
-%----------------------------------------------------------------------------------------
-
-\begin{symbols}{lll} % Include a list of Symbols (a three column table)
-
-$a$ & distance & \si{\meter} \\
-$P$ & power & \si{\watt} (\si{\joule\per\second}) \\
-%Symbol & Name & Unit \\
-
-\addlinespace % Gap to separate the Roman symbols from the Greek
-
-$\omega$ & angular frequency & \si{\radian} \\
-
-\end{symbols}
-
-%----------------------------------------------------------------------------------------
-% DEDICATION
-%----------------------------------------------------------------------------------------
-
-\dedicatory{For/Dedicated to/To my\ldots}
-
-%----------------------------------------------------------------------------------------
-% THESIS CONTENT - CHAPTERS
-%----------------------------------------------------------------------------------------
-
-\mainmatter % Begin numeric (1,2,3...) page numbering
-
-\pagestyle{thesis} % Return the page headers back to the "thesis" style
-
-% Include the chapters of the thesis as separate files from the Chapters folder
-% Uncomment the lines as you write the chapters
-
-\include{Chapters/Chapter1}
-\include{Chapters/Chapter2}
-\include{Chapters/Chapter3}
-%\include{Chapters/Chapter4}
-%\include{Chapters/Chapter5}
-
-%----------------------------------------------------------------------------------------
-% THESIS CONTENT - APPENDICES
-%----------------------------------------------------------------------------------------
-
-\appendix % Cue to tell LaTeX that the following "chapters" are Appendices
-
-% Include the appendices of the thesis as separate files from the Appendices folder
-% Uncomment the lines as you write the Appendices
-
-\include{Appendices/AppendixA}
-%\include{Appendices/AppendixB}
-%\include{Appendices/AppendixC}
-
-%----------------------------------------------------------------------------------------
-% BIBLIOGRAPHY
-%----------------------------------------------------------------------------------------
-
-\printbibliography[heading=bibintoc]
-
-%----------------------------------------------------------------------------------------
-
-\end{document}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/main.toc Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,45 +0,0 @@
-\boolfalse {citerequest}\boolfalse {citetracker}\boolfalse {pagetracker}\boolfalse {backtracker}\relax
-\babel@toc {english}{}
-\contentsline {chapter}{Declaration of Authorship}{iii}{section*.1}
-\contentsline {chapter}{Abstract}{vii}{section*.2}
-\contentsline {chapter}{Acknowledgements}{ix}{section*.3}
-\contentsline {chapter}{\numberline {1}POSIX Lexing With Bit-codes}{1}{chapter.14}
-\contentsline {section}{\numberline {1.1}Introduction To Regexes}{1}{section.15}
-\contentsline {subsection}{\numberline {1.1.1}Back References in Regex--Non-Regular part}{4}{subsection.16}
-\contentsline {section}{\numberline {1.2}Our Solution--Brzozowski Derivatives}{4}{section.17}
-\contentsline {section}{\numberline {1.3}Preliminaries about Lexing Using Brzozowski derivatives}{4}{section.18}
-\contentsline {section}{\numberline {1.4}Backgound}{14}{section.25}
-\contentsline {section}{\numberline {1.5}Engineering and Academic Approaches to Deal with Catastrophic Backtracking}{15}{section.26}
-\contentsline {subsection}{\numberline {1.5.1}DFA Approach}{15}{subsection.27}
-\contentsline {subsection}{\numberline {1.5.2}NFA Approach}{15}{subsection.28}
-\contentsline {section}{\numberline {1.6}Our Approach}{15}{section.29}
-\contentsline {subsection}{\numberline {1.6.1}Existing Work}{15}{subsection.30}
-\contentsline {section}{\numberline {1.7}What this Template Includes}{16}{section.31}
-\contentsline {subsection}{\numberline {1.7.1}Folders}{16}{subsection.32}
-\contentsline {subsection}{\numberline {1.7.2}Files}{16}{subsection.33}
-\contentsline {section}{\numberline {1.8}Filling in Your Information in the \texttt {\bfseries main.tex} File}{17}{section.34}
-\contentsline {section}{\numberline {1.9}The \texttt {main.tex} File Explained}{17}{section.35}
-\contentsline {section}{\numberline {1.10}Thesis Features and Conventions}{18}{section.36}
-\contentsline {subsection}{\numberline {1.10.1}Printing Format}{19}{subsection.37}
-\contentsline {subsection}{\numberline {1.10.2}Using US Letter Paper}{19}{subsection.38}
-\contentsline {subsection}{\numberline {1.10.3}References}{19}{subsection.39}
-\contentsline {subsubsection}{A Note on bibtex}{20}{section*.41}
-\contentsline {subsection}{\numberline {1.10.4}Tables}{20}{subsection.42}
-\contentsline {subsection}{\numberline {1.10.5}Figures}{20}{subsection.44}
-\contentsline {subsection}{\numberline {1.10.6}Typesetting mathematics}{22}{subsection.46}
-\contentsline {section}{\numberline {1.11}Sectioning and Subsectioning}{22}{section.48}
-\contentsline {section}{\numberline {1.12}In Closing}{22}{section.49}
-\contentsline {chapter}{\numberline {2}Chapter Title Here}{23}{chapter.50}
-\contentsline {section}{\numberline {2.1}Properties of $\delimiter "026E30F c$}{23}{section.51}
-\contentsline {subsection}{\numberline {2.1.1}function $\delimiter "026E30F c$ is not 1-to-1}{23}{subsection.52}
-\contentsline {subsection}{\numberline {2.1.2}Subsection 1}{23}{subsection.53}
-\contentsline {subsection}{\numberline {2.1.3}Subsection 2}{23}{subsection.54}
-\contentsline {section}{\numberline {2.2}Main Section 2}{24}{section.55}
-\contentsline {chapter}{\numberline {3}Common Identities In Simplification-Related Functions}{25}{chapter.56}
-\contentsline {section}{\numberline {3.1}Idempotency of $\mathit {simp}$}{25}{section.57}
-\contentsline {subsection}{\numberline {3.1.1}Syntactic Equivalence Under $\mathit {simp}$}{25}{subsection.59}
-\contentsline {subsection}{\numberline {3.1.2}Subsection 2}{25}{subsection.60}
-\contentsline {section}{\numberline {3.2}Main Section 2}{25}{section.61}
-\contentsline {chapter}{\numberline {A}Frequently Asked Questions}{27}{appendix.62}
-\contentsline {section}{\numberline {A.1}How do I change the colors of links?}{27}{section.63}
-\contentsline {chapter}{Bibliography}{29}{appendix*.64}
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/re-java.data Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,20 +0,0 @@
-%% LaTeX2e file `re-java.data'
-%% generated by the `filecontents' environment
-%% from source `main' on 2022/03/16.
-%%
-5 0.00298
-10 0.00418
-15 0.00996
-16 0.01710
-17 0.03492
-18 0.03303
-19 0.05084
-20 0.10177
-21 0.19960
-22 0.41159
-23 0.82234
-24 1.70251
-25 3.36112
-26 6.63998
-27 13.35120
-28 29.81185
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/re-js.data Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,15 +0,0 @@
-%% LaTeX2e file `re-js.data'
-%% generated by the `filecontents' environment
-%% from source `main' on 2022/03/16.
-%%
-5 0.061
-10 0.061
-15 0.061
-20 0.070
-23 0.131
-25 0.308
-26 0.564
-28 1.994
-30 7.648
-31 15.881
-32 32.190
--- a/PhdThesisRealOne/LaTeXTemplates_masters-doctoral-thesis_v2/re-python2.data Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,19 +0,0 @@
-%% LaTeX2e file `re-python2.data'
-%% generated by the `filecontents' environment
-%% from source `main' on 2022/03/16.
-%%
-1 0.033
-5 0.036
-10 0.034
-15 0.036
-18 0.059
-19 0.084
-20 0.141
-21 0.248
-22 0.485
-23 0.878
-24 1.71
-25 3.40
-26 7.08
-27 14.12
-28 26.69
--- a/PhdThesisRealOne/automata_view.aux Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,2 +0,0 @@
-\relax
-\@writefile{toc}{\contentsline {section}{\numberline {1}regular expression derivatives as NFA's}{1}}
--- a/PhdThesisRealOne/automata_view.log Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,490 +0,0 @@
-This is pdfTeX, Version 3.14159265-2.6-1.40.19 (TeX Live 2018) (preloaded format=pdflatex 2019.2.7) 21 FEB 2022 21:41
-entering extended mode
- restricted \write18 enabled.
- file:line:error style messages enabled.
- %&-line parsing enabled.
-**automata_view.tex
-(./automata_view.tex
-LaTeX2e <2018-04-01> patch level 2
-Babel <3.18> and hyphenation patterns for 84 language(s) loaded.
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/article.cls
-Document Class: article 2014/09/29 v1.4h Standard LaTeX document class
-(/usr/local/texlive/2018/texmf-dist/tex/latex/base/size10.clo
-File: size10.clo 2014/09/29 v1.4h Standard LaTeX file (size option)
-)
-\c@part=\count80
-\c@section=\count81
-\c@subsection=\count82
-\c@subsubsection=\count83
-\c@paragraph=\count84
-\c@subparagraph=\count85
-\c@figure=\count86
-\c@table=\count87
-\abovecaptionskip=\skip41
-\belowcaptionskip=\skip42
-\bibindent=\dimen102
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/frontendlayer/tikz.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/basiclayer/pgf.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/utilities/pgfrcs.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfutil-common.te
-x
-\pgfutil@everybye=\toks14
-\pgfutil@tempdima=\dimen103
-\pgfutil@tempdimb=\dimen104
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfutil-common-li
-sts.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfutil-latex.def
-\pgfutil@abb=\box26
-(/usr/local/texlive/2018/texmf-dist/tex/latex/ms/everyshi.sty
-Package: everyshi 2001/05/15 v3.00 EveryShipout Package (MS)
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfrcs.code.tex
-Package: pgfrcs 2015/08/07 v3.0.1a (rcs-revision 1.31)
-))
-Package: pgf 2015/08/07 v3.0.1a (rcs-revision 1.15)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/basiclayer/pgfcore.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics/graphicx.sty
-Package: graphicx 2017/06/01 v1.1a Enhanced LaTeX Graphics (DPC,SPQR)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics/keyval.sty
-Package: keyval 2014/10/28 v1.15 key=value parser (DPC)
-\KV@toks@=\toks15
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics/graphics.sty
-Package: graphics 2017/06/25 v1.2c Standard LaTeX Graphics (DPC,SPQR)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics/trig.sty
-Package: trig 2016/01/03 v1.10 sin cos tan (DPC)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics-cfg/graphics.cfg
-File: graphics.cfg 2016/06/04 v1.11 sample graphics configuration
-)
-Package graphics Info: Driver file: pdftex.def on input line 99.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics-def/pdftex.def
-File: pdftex.def 2018/01/08 v1.0l Graphics/color driver for pdftex
-))
-\Gin@req@height=\dimen105
-\Gin@req@width=\dimen106
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/systemlayer/pgfsys.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsys.code.tex
-Package: pgfsys 2014/07/09 v3.0.1a (rcs-revision 1.48)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex
-\pgfkeys@pathtoks=\toks16
-\pgfkeys@temptoks=\toks17
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfkeysfiltered.c
-ode.tex
-\pgfkeys@tmptoks=\toks18
-))
-\pgf@x=\dimen107
-\pgf@y=\dimen108
-\pgf@xa=\dimen109
-\pgf@ya=\dimen110
-\pgf@xb=\dimen111
-\pgf@yb=\dimen112
-\pgf@xc=\dimen113
-\pgf@yc=\dimen114
-\w@pgf@writea=\write3
-\r@pgf@reada=\read1
-\c@pgf@counta=\count88
-\c@pgf@countb=\count89
-\c@pgf@countc=\count90
-\c@pgf@countd=\count91
-\t@pgf@toka=\toks19
-\t@pgf@tokb=\toks20
-\t@pgf@tokc=\toks21
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgf.cfg
-File: pgf.cfg 2008/05/14 (rcs-revision 1.7)
-)
-Driver file for pgf: pgfsys-pdftex.def
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-pdftex.d
-ef
-File: pgfsys-pdftex.def 2014/10/11 (rcs-revision 1.35)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsys-common-p
-df.def
-File: pgfsys-common-pdf.def 2013/10/10 (rcs-revision 1.13)
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsyssoftpath.
-code.tex
-File: pgfsyssoftpath.code.tex 2013/09/09 (rcs-revision 1.9)
-\pgfsyssoftpath@smallbuffer@items=\count92
-\pgfsyssoftpath@bigbuffer@items=\count93
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/systemlayer/pgfsysprotocol.
-code.tex
-File: pgfsysprotocol.code.tex 2006/10/16 (rcs-revision 1.4)
-)) (/usr/local/texlive/2018/texmf-dist/tex/latex/xcolor/xcolor.sty
-Package: xcolor 2016/05/11 v2.12 LaTeX color extensions (UK)
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/graphics-cfg/color.cfg
-File: color.cfg 2016/01/02 v1.6 sample color configuration
-)
-Package xcolor Info: Driver file: pdftex.def on input line 225.
-Package xcolor Info: Model `cmy' substituted by `cmy0' on input line 1348.
-Package xcolor Info: Model `hsb' substituted by `rgb' on input line 1352.
-Package xcolor Info: Model `RGB' extended on input line 1364.
-Package xcolor Info: Model `HTML' substituted by `rgb' on input line 1366.
-Package xcolor Info: Model `Hsb' substituted by `hsb' on input line 1367.
-Package xcolor Info: Model `tHsb' substituted by `hsb' on input line 1368.
-Package xcolor Info: Model `HSB' substituted by `hsb' on input line 1369.
-Package xcolor Info: Model `Gray' substituted by `gray' on input line 1370.
-Package xcolor Info: Model `wave' substituted by `hsb' on input line 1371.
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcore.code.tex
-Package: pgfcore 2010/04/11 v3.0.1a (rcs-revision 1.7)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathcalc.code.tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathutil.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathparser.code.tex
-\pgfmath@dimen=\dimen115
-\pgfmath@count=\count94
-\pgfmath@box=\box27
-\pgfmath@toks=\toks22
-\pgfmath@stack@operand=\toks23
-\pgfmath@stack@operation=\toks24
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.code.
-tex
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.basic
-.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.trigo
-nometric.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.rando
-m.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.compa
-rison.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.base.
-code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.round
-.code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.misc.
-code.tex)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfunctions.integ
-erarithmetics.code.tex)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmathfloat.code.tex
-\c@pgfmathroundto@lastzeros=\count95
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepoints.co
-de.tex
-File: pgfcorepoints.code.tex 2013/10/07 (rcs-revision 1.27)
-\pgf@picminx=\dimen116
-\pgf@picmaxx=\dimen117
-\pgf@picminy=\dimen118
-\pgf@picmaxy=\dimen119
-\pgf@pathminx=\dimen120
-\pgf@pathmaxx=\dimen121
-\pgf@pathminy=\dimen122
-\pgf@pathmaxy=\dimen123
-\pgf@xx=\dimen124
-\pgf@xy=\dimen125
-\pgf@yx=\dimen126
-\pgf@yy=\dimen127
-\pgf@zx=\dimen128
-\pgf@zy=\dimen129
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathconst
-ruct.code.tex
-File: pgfcorepathconstruct.code.tex 2013/10/07 (rcs-revision 1.29)
-\pgf@path@lastx=\dimen130
-\pgf@path@lasty=\dimen131
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathusage
-.code.tex
-File: pgfcorepathusage.code.tex 2014/11/02 (rcs-revision 1.24)
-\pgf@shorten@end@additional=\dimen132
-\pgf@shorten@start@additional=\dimen133
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorescopes.co
-de.tex
-File: pgfcorescopes.code.tex 2015/05/08 (rcs-revision 1.46)
-\pgfpic=\box28
-\pgf@hbox=\box29
-\pgf@layerbox@main=\box30
-\pgf@picture@serial@count=\count96
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoregraphicst
-ate.code.tex
-File: pgfcoregraphicstate.code.tex 2014/11/02 (rcs-revision 1.12)
-\pgflinewidth=\dimen134
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretransform
-ations.code.tex
-File: pgfcoretransformations.code.tex 2015/08/07 (rcs-revision 1.20)
-\pgf@pt@x=\dimen135
-\pgf@pt@y=\dimen136
-\pgf@pt@temp=\dimen137
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorequick.cod
-e.tex
-File: pgfcorequick.code.tex 2008/10/09 (rcs-revision 1.3)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreobjects.c
-ode.tex
-File: pgfcoreobjects.code.tex 2006/10/11 (rcs-revision 1.2)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepathproce
-ssing.code.tex
-File: pgfcorepathprocessing.code.tex 2013/09/09 (rcs-revision 1.9)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorearrows.co
-de.tex
-File: pgfcorearrows.code.tex 2015/05/14 (rcs-revision 1.43)
-\pgfarrowsep=\dimen138
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreshade.cod
-e.tex
-File: pgfcoreshade.code.tex 2013/07/15 (rcs-revision 1.15)
-\pgf@max=\dimen139
-\pgf@sys@shading@range@num=\count97
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreimage.cod
-e.tex
-File: pgfcoreimage.code.tex 2013/07/15 (rcs-revision 1.18)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoreexternal.
-code.tex
-File: pgfcoreexternal.code.tex 2014/07/09 (rcs-revision 1.21)
-\pgfexternal@startupbox=\box31
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorelayers.co
-de.tex
-File: pgfcorelayers.code.tex 2013/07/18 (rcs-revision 1.7)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcoretranspare
-ncy.code.tex
-File: pgfcoretransparency.code.tex 2013/09/30 (rcs-revision 1.5)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/basiclayer/pgfcorepatterns.
-code.tex
-File: pgfcorepatterns.code.tex 2013/11/07 (rcs-revision 1.5)
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/modules/pgfmoduleshapes.cod
-e.tex
-File: pgfmoduleshapes.code.tex 2014/03/21 (rcs-revision 1.35)
-\pgfnodeparttextbox=\box32
-)
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/modules/pgfmoduleplot.code.
-tex
-File: pgfmoduleplot.code.tex 2015/08/03 (rcs-revision 1.13)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version
--0-65.sty
-Package: pgfcomp-version-0-65 2007/07/03 v3.0.1a (rcs-revision 1.7)
-\pgf@nodesepstart=\dimen140
-\pgf@nodesepend=\dimen141
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/compatibility/pgfcomp-version
--1-18.sty
-Package: pgfcomp-version-1-18 2007/07/23 v3.0.1a (rcs-revision 1.1)
-))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/utilities/pgffor.sty
-(/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/utilities/pgfkeys.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgfkeys.code.tex)
-) (/usr/local/texlive/2018/texmf-dist/tex/latex/pgf/math/pgfmath.sty
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/utilities/pgffor.code.tex
-Package: pgffor 2013/12/13 v3.0.1a (rcs-revision 1.25)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/math/pgfmath.code.tex)
-\pgffor@iter=\dimen142
-\pgffor@skip=\dimen143
-\pgffor@stack=\toks25
-\pgffor@toks=\toks26
-))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/tikz.cod
-e.tex
-Package: tikz 2015/08/07 v3.0.1a (rcs-revision 1.151)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/pgflibraryplothan
-dlers.code.tex
-File: pgflibraryplothandlers.code.tex 2013/08/31 v3.0.1a (rcs-revision 1.20)
-\pgf@plot@mark@count=\count98
-\pgfplotmarksize=\dimen144
-)
-\tikz@lastx=\dimen145
-\tikz@lasty=\dimen146
-\tikz@lastxsaved=\dimen147
-\tikz@lastysaved=\dimen148
-\tikzleveldistance=\dimen149
-\tikzsiblingdistance=\dimen150
-\tikz@figbox=\box33
-\tikz@figbox@bg=\box34
-\tikz@tempbox=\box35
-\tikz@tempbox@bg=\box36
-\tikztreelevel=\count99
-\tikznumberofchildren=\count100
-\tikznumberofcurrentchild=\count101
-\tikz@fig@count=\count102
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/modules/pgfmodulematrix.cod
-e.tex
-File: pgfmodulematrix.code.tex 2013/09/17 (rcs-revision 1.8)
-\pgfmatrixcurrentrow=\count103
-\pgfmatrixcurrentcolumn=\count104
-\pgf@matrix@numberofcolumns=\count105
-)
-\tikz@expandcount=\count106
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibrarytopaths.code.tex
-File: tikzlibrarytopaths.code.tex 2008/06/17 v3.0.1a (rcs-revision 1.2)
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibraryautomata.code.tex
-File: tikzlibraryautomata.code.tex 2008/07/14 v3.0.1a (rcs-revision 1.3)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibraryshapes.multipart.code.tex
-File: tikzlibraryshapes.multipart.code.tex 2008/01/09 v3.0.1a (rcs-revision 1.1
-)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/libraries/shapes/pgflibrary
-shapes.multipart.code.tex
-File: pgflibraryshapes.multipart.code.tex 2010/01/07 v3.0.1a (rcs-revision 1.2)
-
-\pgfnodepartlowerbox=\box37
-\pgfnodeparttwobox=\box38
-\pgfnodepartthreebox=\box39
-\pgfnodepartfourbox=\box40
-\pgfnodeparttwentybox=\box41
-\pgfnodepartnineteenbox=\box42
-\pgfnodeparteighteenbox=\box43
-\pgfnodepartseventeenbox=\box44
-\pgfnodepartsixteenbox=\box45
-\pgfnodepartfifteenbox=\box46
-\pgfnodepartfourteenbox=\box47
-\pgfnodepartthirteenbox=\box48
-\pgfnodeparttwelvebox=\box49
-\pgfnodepartelevenbox=\box50
-\pgfnodeparttenbox=\box51
-\pgfnodepartninebox=\box52
-\pgfnodeparteightbox=\box53
-\pgfnodepartsevenbox=\box54
-\pgfnodepartsixbox=\box55
-\pgfnodepartfivebox=\box56
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/pgf/frontendlayer/tikz/librarie
-s/tikzlibrarypositioning.code.tex
-File: tikzlibrarypositioning.code.tex 2008/10/06 v3.0.1a (rcs-revision 1.7)
-) (./automata_view.aux)
-\openout1 = `automata_view.aux'.
-
-LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 5.
-LaTeX Font Info: ... okay on input line 5.
-LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 5.
-LaTeX Font Info: ... okay on input line 5.
-LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 5.
-LaTeX Font Info: ... okay on input line 5.
-LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 5.
-LaTeX Font Info: ... okay on input line 5.
-LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 5.
-LaTeX Font Info: ... okay on input line 5.
-LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 5.
-LaTeX Font Info: ... okay on input line 5.
-
-ABD: EveryShipout initializing macros
-(/usr/local/texlive/2018/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
-[Loading MPS to PDF converter (version 2006.09.02).]
-\scratchcounter=\count107
-\scratchdimen=\dimen151
-\scratchbox=\box57
-\nofMPsegments=\count108
-\nofMParguments=\count109
-\everyMPshowfont=\toks27
-\MPscratchCnt=\count110
-\MPscratchDim=\dimen152
-\MPnumerator=\count111
-\makeMPintoPDFobject=\count112
-\everyMPtoPDFconversion=\toks28
-) (/usr/local/texlive/2018/texmf-dist/tex/latex/oberdiek/epstopdf-base.sty
-Package: epstopdf-base 2016/05/15 v2.6 Base part for package epstopdf
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/infwarerr.sty
-Package: infwarerr 2016/05/16 v1.4 Providing info/warning/error messages (HO)
-)
-(/usr/local/texlive/2018/texmf-dist/tex/latex/oberdiek/grfext.sty
-Package: grfext 2016/05/16 v1.2 Manage graphics extensions (HO)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/kvdefinekeys.sty
-Package: kvdefinekeys 2016/05/16 v1.4 Define keys (HO)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/ltxcmds.sty
-Package: ltxcmds 2016/05/16 v1.23 LaTeX kernel commands for general use (HO)
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/latex/oberdiek/kvoptions.sty
-Package: kvoptions 2016/05/16 v3.12 Key value format for package options (HO)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/kvsetkeys.sty
-Package: kvsetkeys 2016/05/16 v1.17 Key value parser (HO)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/etexcmds.sty
-Package: etexcmds 2016/05/16 v1.6 Avoid name clashes with e-TeX commands (HO)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/ifluatex.sty
-Package: ifluatex 2016/05/16 v1.4 Provides the ifluatex switch (HO)
-Package ifluatex Info: LuaTeX not detected.
-)
-Package etexcmds Info: Could not find \expanded.
-(etexcmds) That can mean that you are not using pdfTeX 1.50 or
-(etexcmds) that some package has redefined \expanded.
-(etexcmds) In the latter case, load this package earlier.
-)))
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/pdftexcmds.sty
-Package: pdftexcmds 2018/01/30 v0.27 Utility functions of pdfTeX for LuaTeX (HO
-)
-
-(/usr/local/texlive/2018/texmf-dist/tex/generic/oberdiek/ifpdf.sty
-Package: ifpdf 2017/03/15 v3.2 Provides the ifpdf switch
-)
-Package pdftexcmds Info: LuaTeX not detected.
-Package pdftexcmds Info: \pdf@primitive is available.
-Package pdftexcmds Info: \pdf@ifprimitive is available.
-Package pdftexcmds Info: \pdfdraftmode found.
-)
-Package epstopdf-base Info: Redefining graphics rule for `.eps' on input line 4
-38.
-Package grfext Info: Graphics extension search list:
-(grfext) [.pdf,.png,.jpg,.mps,.jpeg,.jbig2,.jb2,.PDF,.PNG,.JPG,.JPE
-G,.JBIG2,.JB2,.eps]
-(grfext) \AppendGraphicsExtensions on input line 456.
-
-(/usr/local/texlive/2018/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg
-File: epstopdf-sys.cfg 2010/07/13 v1.3 Configuration of (r)epstopdf for TeX Liv
-e
-))
-LaTeX Font Info: External font `cmex10' loaded for size
-(Font) <7> on input line 8.
-LaTeX Font Info: External font `cmex10' loaded for size
-(Font) <5> on input line 8.
-
-[1
-
-{/usr/local/texlive/2018/texmf-var/fonts/map/pdftex/updmap/pdftex.map}]
-(./automata_view.aux) )
-Here is how much of TeX's memory you used:
- 11979 strings out of 492649
- 255479 string characters out of 6129623
- 299018 words of memory out of 5000000
- 15660 multiletter control sequences out of 15000+600000
- 4245 words of font info for 16 fonts, out of 8000000 for 9000
- 1141 hyphenation exceptions out of 8191
- 55i,8n,68p,431b,791s stack positions out of 5000i,500n,10000p,200000b,80000s
-</usr/local/texlive/2018/texmf-dist/fonts/type1/public/a
-msfonts/cm/cmbx12.pfb></usr/local/texlive/2018/texmf-dist/fonts/type1/public/am
-sfonts/cm/cmmi10.pfb></usr/local/texlive/2018/texmf-dist/fonts/type1/public/ams
-fonts/cm/cmr10.pfb></usr/local/texlive/2018/texmf-dist/fonts/type1/public/amsfo
-nts/cm/cmr7.pfb>
-Output written on automata_view.pdf (1 page, 37862 bytes).
-PDF statistics:
- 27 PDF objects out of 1000 (max. 8388607)
- 19 compressed objects within 1 object stream
- 0 named destinations out of 1000 (max. 500000)
- 13 words of extra memory for PDF output out of 10000 (max. 10000000)
-
Binary file PhdThesisRealOne/automata_view.pdf has changed
Binary file PhdThesisRealOne/automata_view.synctex.gz has changed
--- a/PhdThesisRealOne/automata_view.tex Thu Mar 24 20:59:43 2022 +0000
+++ /dev/null Thu Jan 01 00:00:00 1970 +0000
@@ -1,20 +0,0 @@
-\documentclass{article}
-
-\usepackage{tikz}
-\usetikzlibrary{automata,positioning}
-\begin{document}
-\section{regular expression derivatives as NFA's}
-\begin{tikzpicture}[shorten >=1pt,node distance=2cm,on grid,auto]
- \node[state,initial] (q_0) {$q_0$};
- \node[state] (q_1) [above right=of q_0] {$q_1$};
- \node[state] (q_2) [below right=of q_0] {$q_2$};
- \node[state,accepting](q_3) [below right=of q_1] {$q_3$};
- \path[->]
- (q_0) edge node {0} (q_1)
- edge node [swap] {1} (q_2)
- (q_1) edge node {1} (q_3)
- edge [loop above] node {0} ()
- (q_2) edge node [swap] {0} (q_3)
- edge [loop below] node {1} ();
-\end{tikzpicture}
-\end{document}
\ No newline at end of file
Binary file PhdThesisRealOne/thesis.pdf has changed
--- a/thys2/BasicIdentities.thy Thu Mar 24 20:59:43 2022 +0000
+++ b/thys2/BasicIdentities.thy Thu Mar 24 21:11:12 2022 +0000
@@ -54,7 +54,17 @@
else x # (rdistinct xs ({x} \<union> acc)))"
-
+lemma distinct_not_exist:
+ shows "a \<notin> set rs \<Longrightarrow> rdistinct rs rset = rdistinct rs (insert a rset)"
+ apply(induct rs arbitrary: rset)
+ apply simp
+ apply(case_tac "aa \<in> rset")
+ apply simp
+ apply(subgoal_tac "a \<noteq> aa")
+ prefer 2
+ apply simp
+ apply simp
+ done
fun rflts :: "rrexp list \<Rightarrow> rrexp list"
--- a/thys2/ClosedForms.thy Thu Mar 24 20:59:43 2022 +0000
+++ b/thys2/ClosedForms.thy Thu Mar 24 21:11:12 2022 +0000
@@ -468,26 +468,46 @@
apply(subgoal_tac "rsimp_ALTs (aa # list @ aaa # lista) = RALTS (aa # list @ aaa # lista)")
apply simp
using rsimpalts_conscons by presburger
+
+
+
+
+lemma distinct_flts_no0:
+ shows "rdistinct (rflts rs) (insert RZERO rset) = rdistinct (rflts rs) rset"
+ apply(induct rs)
+ apply simp
+ apply(case_tac a)
+ using rflts.simps(2) apply presburger
+ sorry
+
+
+lemma simp_der_flts:
+ shows "rsimp (RALTS (rdistinct (map (rder x) (rflts rs)) rset))=
+ rsimp (RALTS (rdistinct (rflts (map (rder x) rs)) rset))"
+
+ apply(induct rs arbitrary: rset)
+ apply simp
+ apply(case_tac a)
+ apply simp
+ apply(case_tac "RZERO \<in> rset")
+ apply simp
+ apply simp
+ sorry
+
+
lemma simp_der_pierce_flts:
shows " rsimp (rsimp_ALTs (rdistinct (map (rder x) (rflts (map (rsimp \<circ> (\<lambda>r. rders_simp r xs)) rs))) {})) =
rsimp (rsimp_ALTs (rdistinct (rflts (map (rder x) (map (rsimp \<circ> (\<lambda>r. rders_simp r xs)) rs))) {}))"
- oops
+ sorry
+
lemma simp_more_distinct:
shows "rsimp (rsimp_ALTs (rsa @ rs)) = rsimp (rsimp_ALTs (rsa @ (rdistinct rs (set rsa)))) "
-and "a1 \<in> set rsb \<Longrightarrow> rsimp (rsimp_ALTs (rsb @ a1 # rs)) = rsimp (rsimp_ALTs (rsb @ rs))"
- apply(induct rs arbitrary: rsa rsb a1)
- apply simp
- apply simp
- apply(case_tac " a \<in> set rsa")
- apply simp
- prefer 2
- apply simp
- apply(drule_tac x = "rsa @ [a]" in meta_spec)
- apply simp
+
+
sorry
@@ -756,7 +776,7 @@
apply simp
using add0_isomorphic apply blast
apply simp
- sorry
+ oops
lemma alts_closed_form: shows
"rsimp (rders_simp (RALTS rs) s) =